From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (2048 bits)) (No client certificate requested) by finch.gentoo.org (Postfix) with ESMTPS id 4D2E7158089 for ; Tue, 24 Oct 2023 21:11:35 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id 408292BC019; Tue, 24 Oct 2023 21:11:34 +0000 (UTC) Received: from smtp.gentoo.org (smtp.gentoo.org [IPv6:2001:470:ea4a:1:5054:ff:fec7:86e4]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256) (No client certificate requested) by pigeon.gentoo.org (Postfix) with ESMTPS id 2A4002BC019 for ; Tue, 24 Oct 2023 21:11:34 +0000 (UTC) Received: from oystercatcher.gentoo.org (oystercatcher.gentoo.org [148.251.78.52]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id 4A06F335CB7 for ; Tue, 24 Oct 2023 21:11:33 +0000 (UTC) Received: from localhost.localdomain (localhost [IPv6:::1]) by oystercatcher.gentoo.org (Postfix) with ESMTP id 881DF12B5 for ; Tue, 24 Oct 2023 21:11:31 +0000 (UTC) From: "Michał Górny" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Michał Górny" Message-ID: <1698181882.49b4ae50187c9a51bba76ab12e5e458fc75c5242.mgorny@gentoo> Subject: [gentoo-commits] repo/gentoo:master commit in: dev-python/scipy/ X-VCS-Repository: repo/gentoo X-VCS-Files: dev-python/scipy/scipy-1.11.3-r1.ebuild X-VCS-Directories: dev-python/scipy/ X-VCS-Committer: mgorny X-VCS-Committer-Name: Michał Górny X-VCS-Revision: 49b4ae50187c9a51bba76ab12e5e458fc75c5242 X-VCS-Branch: master Date: Tue, 24 Oct 2023 21:11:31 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Auto-Response-Suppress: DR, RN, NRN, OOF, AutoReply X-Archives-Salt: 2624930c-37fc-47a9-86ff-8a297b4961f3 X-Archives-Hash: fd2190270e331519300a40148eba7c42 commit: 49b4ae50187c9a51bba76ab12e5e458fc75c5242 Author: Michał Górny gentoo org> AuthorDate: Tue Oct 24 19:35:56 2023 +0000 Commit: Michał Górny gentoo org> CommitDate: Tue Oct 24 21:11:22 2023 +0000 URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=49b4ae50 dev-python/scipy: Enable py3.12 Signed-off-by: Michał Górny gentoo.org> dev-python/scipy/scipy-1.11.3-r1.ebuild | 129 ++++++++++++++++++++++++++++++++ 1 file changed, 129 insertions(+) diff --git a/dev-python/scipy/scipy-1.11.3-r1.ebuild b/dev-python/scipy/scipy-1.11.3-r1.ebuild new file mode 100644 index 000000000000..ec1b7d97a795 --- /dev/null +++ b/dev-python/scipy/scipy-1.11.3-r1.ebuild @@ -0,0 +1,129 @@ +# Copyright 1999-2023 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +FORTRAN_NEEDED=fortran +DISTUTILS_EXT=1 +DISTUTILS_USE_PEP517=meson-python +PYTHON_COMPAT=( python3_{10..12} ) +PYTHON_REQ_USE="threads(+)" + +inherit fortran-2 distutils-r1 multiprocessing + +DESCRIPTION="Scientific algorithms library for Python" +HOMEPAGE=" + https://scipy.org/ + https://github.com/scipy/scipy/ + https://pypi.org/project/scipy/ +" + +if [[ ${PV} == *9999* ]] ; then + inherit git-r3 + + # Need submodules, so git for now. + EGIT_REPO_URI="https://github.com/scipy/scipy" + EGIT_BRANCH="maintenance/$(ver_cut 1-2).x" + EGIT_SUBMODULES=( '*' ) +else + inherit pypi + + # Upstream is often behind with doc updates + #DOC_PV=${PV} + DOC_PV=1.11.0 + + SRC_URI+=" + doc? ( + https://docs.scipy.org/doc/${PN}-${DOC_PV}/${PN}-html-${DOC_PV}.zip + )" + + if [[ ${PV} != *rc* ]] ; then + KEYWORDS="~amd64 ~arm ~arm64 ~loong ~riscv ~x86" + fi +fi + +LICENSE="BSD LGPL-2" +SLOT="0" +IUSE="doc +fortran test-rust" + +# umfpack is technically optional but it's preferred to have it available. +DEPEND=" + >=dev-python/numpy-1.21.6[lapack,${PYTHON_USEDEP}] + sci-libs/arpack:= + sci-libs/umfpack + virtual/cblas + >=virtual/lapack-3.8 +" +RDEPEND=" + ${DEPEND} + dev-python/pillow[${PYTHON_USEDEP}] +" +BDEPEND=" + dev-lang/swig + >=dev-python/cython-0.29.35[${PYTHON_USEDEP}] + >=dev-python/meson-python-0.12.1[${PYTHON_USEDEP}] + >=dev-python/pybind11-2.10.4[${PYTHON_USEDEP}] + >=dev-util/meson-1.1.0 + !kernel_Darwin? ( dev-util/patchelf ) + virtual/pkgconfig + doc? ( app-arch/unzip ) + fortran? ( dev-python/pythran[${PYTHON_USEDEP}] ) + test? ( + dev-python/pytest-xdist[${PYTHON_USEDEP}] + ) + test-rust? ( + dev-python/pooch[${PYTHON_USEDEP}] + ) +" + +distutils_enable_tests pytest + +src_unpack() { + default + + if use doc; then + unzip -qo "${DISTDIR}"/${PN}-html-${DOC_PV}.zip -d html || die + fi +} + +python_configure_all() { + DISTUTILS_ARGS=( + -Dblas=blas + -Dlapack=lapack + -Duse-pythran=$(usex fortran true false) + ) +} + +python_test() { + cd "${BUILD_DIR}/install$(python_get_sitedir)" || die + + local EPYTEST_DESELECT=( + # Network + scipy/datasets/tests/test_data.py::TestDatasets::test_existence_all + scipy/datasets/tests/test_data.py::TestDatasets::test_ascent + scipy/datasets/tests/test_data.py::TestDatasets::test_face + scipy/datasets/tests/test_data.py::TestDatasets::test_electrocardiogram + + # Precision issue with diff. blas? + scipy/optimize/tests/test__basinhopping.py::Test_Metropolis::test_gh7799 + + # Crashes with assertion, not a regression + # https://github.com/scipy/scipy/issues/19321 + scipy/signal/tests/test_signaltools.py::test_lfilter_bad_object + ) + local EPYTEST_IGNORE=() + + if ! has_version -b "dev-python/pooch[${PYTHON_USEDEP}]" ; then + EPYTEST_IGNORE+=( + scipy/datasets/tests/test_data.py + ) + fi + + epytest -n "$(makeopts_jobs)" --dist=worksteal scipy +} + +python_install_all() { + use doc && local HTML_DOCS=( "${WORKDIR}"/html/. ) + + distutils-r1_python_install_all +}