From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (2048 bits)) (No client certificate requested) by finch.gentoo.org (Postfix) with ESMTPS id 1D71E15806E for ; Mon, 22 May 2023 11:12:22 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id E52D6E0AC2; Mon, 22 May 2023 11:12:20 +0000 (UTC) Received: from smtp.gentoo.org (woodpecker.gentoo.org [140.211.166.183]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256) (No client certificate requested) by pigeon.gentoo.org (Postfix) with ESMTPS id C2396E0AC2 for ; Mon, 22 May 2023 11:12:20 +0000 (UTC) Received: from oystercatcher.gentoo.org (oystercatcher.gentoo.org [148.251.78.52]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id B021B340AEC for ; Mon, 22 May 2023 11:12:19 +0000 (UTC) Received: from localhost.localdomain (localhost [IPv6:::1]) by oystercatcher.gentoo.org (Postfix) with ESMTP id 15FDCA75 for ; Mon, 22 May 2023 11:12:18 +0000 (UTC) From: "Horea Christian" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Horea Christian" Message-ID: <1684753902.69e782ccfd16db0a1efb0d494de1c052a3ae4335.chymera@gentoo> Subject: [gentoo-commits] proj/sci:master commit in: dev-python/pynwb/ X-VCS-Repository: proj/sci X-VCS-Files: dev-python/pynwb/pynwb-2.3.2.ebuild X-VCS-Directories: dev-python/pynwb/ X-VCS-Committer: chymera X-VCS-Committer-Name: Horea Christian X-VCS-Revision: 69e782ccfd16db0a1efb0d494de1c052a3ae4335 X-VCS-Branch: master Date: Mon, 22 May 2023 11:12:18 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Auto-Response-Suppress: DR, RN, NRN, OOF, AutoReply X-Archives-Salt: 61d22e67-3863-476c-ae04-916704e78f63 X-Archives-Hash: 15b2611422fb8315d8480f4500978023 commit: 69e782ccfd16db0a1efb0d494de1c052a3ae4335 Author: Horea Christian chymera eu> AuthorDate: Mon May 22 11:11:42 2023 +0000 Commit: Horea Christian gmail com> CommitDate: Mon May 22 11:11:42 2023 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=69e782cc dev-python/pynwb: add 2.3.2 Signed-off-by: Horea Christian chymera.eu> dev-python/pynwb/pynwb-2.3.2.ebuild | 44 +++++++++++++++++++++++++++++++++++++ 1 file changed, 44 insertions(+) diff --git a/dev-python/pynwb/pynwb-2.3.2.ebuild b/dev-python/pynwb/pynwb-2.3.2.ebuild new file mode 100644 index 000000000..6599fbf8f --- /dev/null +++ b/dev-python/pynwb/pynwb-2.3.2.ebuild @@ -0,0 +1,44 @@ +# Copyright 1999-2023 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +DISTUTILS_USE_PEP517=setuptools +PYTHON_COMPAT=( python3_{10..11} ) +inherit distutils-r1 pypi + +DESCRIPTION="A Python API for working with Neurodata stored in the NWB Format " +HOMEPAGE="https://github.com/NeurodataWithoutBorders/pynwb" + +SLOT="0" +LICENSE="BSD" +KEYWORDS="~amd64 ~x86" + +RDEPEND=" + >=sci-libs/hdf5-1.12.2 + >=dev-python/hdmf-3.3.2[${PYTHON_USEDEP}] + dev-python/h5py[${PYTHON_USEDEP}] + dev-python/numpy[${PYTHON_USEDEP}] + dev-python/pandas[${PYTHON_USEDEP}] + dev-python/python-dateutil[${PYTHON_USEDEP}] + " +BDEPEND="" + +EPYTEST_DESELECT=( + # Reported upsream: + # https://github.com/NeurodataWithoutBorders/pynwb/issues/1580 + tests/validation/test_validate.py::TestValidateCLI::test_validate_file_cached + tests/validation/test_validate.py::TestValidateCLI::test_validate_file_cached_bad_ns + tests/validation/test_validate.py::TestValidateCLI::test_validate_file_cached_core + tests/validation/test_validate.py::TestValidateCLI::test_validate_file_cached_extension + tests/validation/test_validate.py::TestValidateCLI::test_validate_file_cached_extension_pass_ns + tests/validation/test_validate.py::TestValidateCLI::test_validate_file_cached_hdmf_common + tests/validation/test_validate.py::TestValidateCLI::test_validate_file_cached_ignore + tests/validation/test_validate.py::TestValidateCLI::test_validate_file_invalid + tests/validation/test_validate.py::TestValidateCLI::test_validate_file_list_namespaces_core + tests/validation/test_validate.py::TestValidateCLI::test_validate_file_list_namespaces_extension + tests/validation/test_validate.py::TestValidateCLI::test_validate_file_no_cache + tests/validation/test_validate.py::TestValidateCLI::test_validate_file_no_cache_bad_ns +) + +distutils_enable_tests pytest