[gentoo-commits] repo/gentoo:master commit in: dev-python/pytables/, dev-python/pytables/files/

["Michał Górny" <mgorny@gentoo.org>]

commit:     fe9b3c589dc0033b806bf3632e4fa9a445a696cd
Author:     Michał Górny <mgorny <AT> gentoo <DOT> org>
AuthorDate: Thu May 11 06:20:47 2023 +0000
Commit:     Michał Górny <mgorny <AT> gentoo <DOT> org>
CommitDate: Thu May 11 06:22:22 2023 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=fe9b3c58

dev-python/pytables: Backport cython-3 fix

Closes: https://bugs.gentoo.org/898710
Signed-off-by: Michał Górny <mgorny <AT> gentoo.org>

 .../pytables/files/pytables-3.8.0-cython3.patch    | 40 ++++++++++++++++++++++
 dev-python/pytables/pytables-3.8.0-r3.ebuild       |  1 +
 2 files changed, 41 insertions(+)

diff --git a/dev-python/pytables/files/pytables-3.8.0-cython3.patch b/dev-python/pytables/files/pytables-3.8.0-cython3.patch
new file mode 100644
index 000000000000..9ad0b72d224a
--- /dev/null
+++ b/dev-python/pytables/files/pytables-3.8.0-cython3.patch
@@ -0,0 +1,40 @@
+From a70e36f0b0d4fb15b0b50e7ca513c4e4452767cc Mon Sep 17 00:00:00 2001
+From: Matus Valo <matusvalo@gmail.com>
+Date: Wed, 15 Mar 2023 22:49:07 +0100
+Subject: [PATCH] Fix build errors when compiled using cython 3.0.0b1.
+
+---
+ pyproject.toml            | 2 +-
+ tables/tableextension.pyx | 2 +-
+ tables/utilsextension.pyx | 2 +-
+ 3 files changed, 3 insertions(+), 3 deletions(-)
+
+diff --git a/tables/tableextension.pyx b/tables/tableextension.pyx
+index 8f3bb01b..4a50c6ab 100644
+--- a/tables/tableextension.pyx
++++ b/tables/tableextension.pyx
+@@ -37,7 +37,7 @@ from .utils import SizeType
+ from .utilsextension cimport get_native_type, cstr_to_pystr
+ 
+ # numpy functions & objects
+-from hdf5extension cimport Leaf
++from .hdf5extension cimport Leaf
+ from cpython cimport PyErr_Clear
+ from libc.stdio cimport snprintf
+ from libc.stdlib cimport malloc, free
+diff --git a/tables/utilsextension.pyx b/tables/utilsextension.pyx
+index 5b16dcd3..664e1ea5 100644
+--- a/tables/utilsextension.pyx
++++ b/tables/utilsextension.pyx
+@@ -344,7 +344,7 @@ except ImportError:
+ #---------------------------------------------------------------------
+ 
+ # Error handling helpers
+-cdef herr_t e_walk_cb(unsigned n, const H5E_error_t *err, void *data) with gil:
++cdef herr_t e_walk_cb(unsigned n, const H5E_error_t *err, void *data) noexcept with gil:
+     cdef object bt = <object>data   # list
+     #cdef char major_msg[256]
+     #cdef char minor_msg[256]
+-- 
+2.40.1
+

diff --git a/dev-python/pytables/pytables-3.8.0-r3.ebuild b/dev-python/pytables/pytables-3.8.0-r3.ebuild
index c2dfebf6f12b..4eb70e76b350 100644
--- a/dev-python/pytables/pytables-3.8.0-r3.ebuild
+++ b/dev-python/pytables/pytables-3.8.0-r3.ebuild
@@ -52,6 +52,7 @@ python_prepare_all() {
 	local PATCHES=(
 		"${FILESDIR}"/${P}-blosc2.patch
 		"${FILESDIR}"/${P}-optional-cpuinfo.patch
+		"${FILESDIR}"/${P}-cython3.patch
 	)
 
 	export PYTABLES_NO_EMBEDDED_LIBS=1