From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (2048 bits)) (No client certificate requested) by finch.gentoo.org (Postfix) with ESMTPS id 62FD515ACFC for ; Tue, 2 May 2023 18:42:58 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id 876E6E08F2; Tue, 2 May 2023 18:42:57 +0000 (UTC) Received: from smtp.gentoo.org (woodpecker.gentoo.org [140.211.166.183]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits)) (No client certificate requested) by pigeon.gentoo.org (Postfix) with ESMTPS id 6A6E0E08F2 for ; Tue, 2 May 2023 18:42:57 +0000 (UTC) Received: from oystercatcher.gentoo.org (oystercatcher.gentoo.org [148.251.78.52]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits)) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id 6B77B34159B for ; Tue, 2 May 2023 18:42:56 +0000 (UTC) Received: from localhost.localdomain (localhost [IPv6:::1]) by oystercatcher.gentoo.org (Postfix) with ESMTP id 07BF9A5C for ; Tue, 2 May 2023 18:42:55 +0000 (UTC) From: "Pacho Ramos" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Pacho Ramos" Message-ID: <1683052966.618bc6c662f2658d4e245c75143a2d3189015f91.pacho@gentoo> Subject: [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/MDAnalysis/ X-VCS-Repository: repo/gentoo X-VCS-Files: sci-chemistry/MDAnalysis/MDAnalysis-2.4.3.ebuild sci-chemistry/MDAnalysis/Manifest X-VCS-Directories: sci-chemistry/MDAnalysis/ X-VCS-Committer: pacho X-VCS-Committer-Name: Pacho Ramos X-VCS-Revision: 618bc6c662f2658d4e245c75143a2d3189015f91 X-VCS-Branch: master Date: Tue, 2 May 2023 18:42:55 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Auto-Response-Suppress: DR, RN, NRN, OOF, AutoReply X-Archives-Salt: 42f34b3d-a629-4c73-b256-490a11f678a2 X-Archives-Hash: 3b71e3f7403fa18bea2d2b8ce1043fbb commit: 618bc6c662f2658d4e245c75143a2d3189015f91 Author: Pacho Ramos gentoo org> AuthorDate: Tue May 2 18:33:23 2023 +0000 Commit: Pacho Ramos gentoo org> CommitDate: Tue May 2 18:42:46 2023 +0000 URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=618bc6c6 sci-chemistry/MDAnalysis: add 2.4.3 Signed-off-by: Pacho Ramos gentoo.org> sci-chemistry/MDAnalysis/MDAnalysis-2.4.3.ebuild | 39 ++++++++++++++++++++++++ sci-chemistry/MDAnalysis/Manifest | 1 + 2 files changed, 40 insertions(+) diff --git a/sci-chemistry/MDAnalysis/MDAnalysis-2.4.3.ebuild b/sci-chemistry/MDAnalysis/MDAnalysis-2.4.3.ebuild new file mode 100644 index 000000000000..5e7d91b36bf3 --- /dev/null +++ b/sci-chemistry/MDAnalysis/MDAnalysis-2.4.3.ebuild @@ -0,0 +1,39 @@ +# Copyright 1999-2023 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +PYTHON_COMPAT=( python3_{9..10} ) + +DISTUTILS_USE_PEP517=setuptools +PYPI_NO_NORMALIZE=1 + +inherit distutils-r1 pypi + +DESCRIPTION="A python library to analyze and manipulate molecular dynamics trajectories" +HOMEPAGE="https://www.mdanalysis.org" + +SLOT="0" +LICENSE="GPL-2" +KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" + +# TODO: fix this +# ImportError: MDAnalysis not installed properly. This can happen if your C extensions have not been built. +RESTRICT="test" + +RDEPEND=" + >=dev-python/numpy-1.16.0[${PYTHON_USEDEP}] + >=dev-python/scipy-1.0.0[${PYTHON_USEDEP}] + >=sci-biology/biopython-1.71[${PYTHON_USEDEP}] + >=dev-python/networkx-1.0[${PYTHON_USEDEP}] + >=dev-python/GridDataFormats-0.4.0[${PYTHON_USEDEP}] + >=dev-python/joblib-0.12[${PYTHON_USEDEP}] + >=dev-python/matplotlib-1.5.1[${PYTHON_USEDEP}] + >=dev-python/mmtf-python-1.0.0[${PYTHON_USEDEP}] + >=dev-python/tqdm-4.43.0[${PYTHON_USEDEP}] + >=dev-python/gsd-1.9.3[${PYTHON_USEDEP}] + dev-python/threadpoolctl[${PYTHON_USEDEP}] +" +BDEPEND="${RDEPEND}" + +distutils_enable_tests pytest diff --git a/sci-chemistry/MDAnalysis/Manifest b/sci-chemistry/MDAnalysis/Manifest index 81a4e8053d86..ce48cb3b96d6 100644 --- a/sci-chemistry/MDAnalysis/Manifest +++ b/sci-chemistry/MDAnalysis/Manifest @@ -1 +1,2 @@ DIST MDAnalysis-2.4.1.tar.gz 3746899 BLAKE2B af63f74a31dcde8a68cbffe5158f2f955d5eda1345bcff6a19e8df3284101b1e85006de3326d29d4fe1867dc6b0c5f55467b9e3242704f97440c6a43b52f47b8 SHA512 796dad98c26bd36f30db166bea5ff782aa5e3ac5cddb1675b628fb753a4f645fb27e06d3986047e2ba21a22cd91f96d0ba8e529256ed960a2b7cf95204076927 +DIST MDAnalysis-2.4.3.tar.gz 3747565 BLAKE2B 733be78aa3e57e8bbb9c291606a86d9100cb904cc587fa3e44c4205596b4da7eb5c2247388655dcd145b45ca6ecb47a3f95d7d659d029232d1febd2ebc99ab51 SHA512 0870bc392ef8b8fbae68cf60d1df2f5d413f4d1235ca795421061fd32a8fe97867d5bd610288237a59d1075f31cc43d281ab2f1e7e8bb0767dac7d278b8453d8