From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (2048 bits)) (No client certificate requested) by finch.gentoo.org (Postfix) with ESMTPS id B100615ACB3 for ; Thu, 6 Apr 2023 19:29:34 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id A4172E08B0; Thu, 6 Apr 2023 19:29:32 +0000 (UTC) Received: from smtp.gentoo.org (dev.gentoo.org [IPv6:2001:470:ea4a:1:5054:ff:fec7:86e4]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits)) (No client certificate requested) by pigeon.gentoo.org (Postfix) with ESMTPS id 8D857E08B0 for ; Thu, 6 Apr 2023 19:29:32 +0000 (UTC) Received: from oystercatcher.gentoo.org (oystercatcher.gentoo.org [148.251.78.52]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits)) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id 98102340F2E for ; Thu, 6 Apr 2023 19:29:31 +0000 (UTC) Received: from localhost.localdomain (localhost [IPv6:::1]) by oystercatcher.gentoo.org (Postfix) with ESMTP id 4B0D1A1F for ; Thu, 6 Apr 2023 19:29:29 +0000 (UTC) From: "David Seifert" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "David Seifert" Message-ID: <1680809349.29808b44599626d44da9202e86f99c5c6fc5edfd.soap@gentoo> Subject: [gentoo-commits] repo/gentoo:master commit in: sci-libs/htslib/ X-VCS-Repository: repo/gentoo X-VCS-Files: sci-libs/htslib/Manifest sci-libs/htslib/htslib-1.16.ebuild X-VCS-Directories: sci-libs/htslib/ X-VCS-Committer: soap X-VCS-Committer-Name: David Seifert X-VCS-Revision: 29808b44599626d44da9202e86f99c5c6fc5edfd X-VCS-Branch: master Date: Thu, 6 Apr 2023 19:29:29 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Auto-Response-Suppress: DR, RN, NRN, OOF, AutoReply X-Archives-Salt: 08bdbbd1-d44f-40c0-8807-26540bde255c X-Archives-Hash: cb51a9751d436b20eb22b1dcdf754ef7 commit: 29808b44599626d44da9202e86f99c5c6fc5edfd Author: David Seifert gentoo org> AuthorDate: Thu Apr 6 19:29:09 2023 +0000 Commit: David Seifert gentoo org> CommitDate: Thu Apr 6 19:29:09 2023 +0000 URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=29808b44 sci-libs/htslib: drop 1.16 Signed-off-by: David Seifert gentoo.org> sci-libs/htslib/Manifest | 1 - sci-libs/htslib/htslib-1.16.ebuild | 52 -------------------------------------- 2 files changed, 53 deletions(-) diff --git a/sci-libs/htslib/Manifest b/sci-libs/htslib/Manifest index 6f53bfe1e726..38e157095820 100644 --- a/sci-libs/htslib/Manifest +++ b/sci-libs/htslib/Manifest @@ -1,2 +1 @@ -DIST htslib-1.16.tar.bz2 4466776 BLAKE2B 4957dd7a25b3d0b939d4e924db018916a5f8a13a81e55ebd1ce1acc548986e581d017ead9a08245a4af1ebdcd15536f082425ebe05f16eb4faad27d332e48482 SHA512 9fa0b1f9bba50f889d4542825c9543fb3b34c13b4cc0e18940a66fafd130749574bfa2c2663d8b39f0b4ed2b298bf130367cda1b17b2929093d64b386730cbc5 DIST htslib-1.17.tar.bz2 4619884 BLAKE2B c45591b3f1da4f6ddfdf5e1a20864583d57de2a460d42049715335fce7dafe1f5cd14403e6033fee4f9d0bfc75f8777b5835d2d01bf2cadff0155d9fc92b97d9 SHA512 624ab449d57713dab2d34399926c065f8cff8a45e6fbe68e0bb518c601421f587b613caeb095f8639b1d67cdb4a65d658c85f942173bcaa48da026fe15def5d3 diff --git a/sci-libs/htslib/htslib-1.16.ebuild b/sci-libs/htslib/htslib-1.16.ebuild deleted file mode 100644 index c4bd910685de..000000000000 --- a/sci-libs/htslib/htslib-1.16.ebuild +++ /dev/null @@ -1,52 +0,0 @@ -# Copyright 1999-2022 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=8 - -inherit toolchain-funcs - -DESCRIPTION="C library for high-throughput sequencing data formats" -HOMEPAGE="http://www.htslib.org/" -SRC_URI="https://github.com/samtools/${PN}/releases/download/${PV}/${P}.tar.bz2" - -LICENSE="MIT" -SLOT="0/3" -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" -IUSE="+bzip2 curl +lzma" - -RDEPEND=" - sys-libs/zlib - bzip2? ( app-arch/bzip2 ) - curl? ( net-misc/curl ) - lzma? ( app-arch/xz-utils )" -DEPEND="${RDEPEND}" - -src_prepare() { - default - - # upstream injects LDFLAGS into the .pc file, - # which is a big nono for QA - sed -e '/^\(static_l\|Libs.private\|Requires.private\)/d' \ - -i htslib.pc.in || die -} - -src_configure() { - econf \ - --disable-gcs \ - --disable-plugins \ - --disable-s3 \ - $(use_enable bzip2 bz2) \ - $(use_enable curl libcurl) \ - $(use_enable lzma) -} - -src_compile() { - emake AR="$(tc-getAR)" -} - -src_install() { - default - - # doesn't use libtool, can't disable static libraries - find "${ED}" -name '*.a' -delete || die -}