From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (2048 bits)) (No client certificate requested) by finch.gentoo.org (Postfix) with ESMTPS id 0564215ACB3 for ; Thu, 6 Apr 2023 06:43:27 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id 3BAD1E07BA; Thu, 6 Apr 2023 06:43:26 +0000 (UTC) Received: from smtp.gentoo.org (dev.gentoo.org [IPv6:2001:470:ea4a:1:5054:ff:fec7:86e4]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256) (No client certificate requested) by pigeon.gentoo.org (Postfix) with ESMTPS id 2251EE07BA for ; Thu, 6 Apr 2023 06:43:26 +0000 (UTC) Received: from oystercatcher.gentoo.org (oystercatcher.gentoo.org [148.251.78.52]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id 28AC9335D74 for ; Thu, 6 Apr 2023 06:43:25 +0000 (UTC) Received: from localhost.localdomain (localhost [IPv6:::1]) by oystercatcher.gentoo.org (Postfix) with ESMTP id 7011499A for ; Thu, 6 Apr 2023 06:43:23 +0000 (UTC) From: "Horea Christian" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Horea Christian" Message-ID: <1680763366.30fcfb55431880f3525473433b4828862ab150d4.chymera@gentoo> Subject: [gentoo-commits] proj/sci:master commit in: sci-biology/samri/ X-VCS-Repository: proj/sci X-VCS-Files: sci-biology/samri/samri-0.5.2.ebuild X-VCS-Directories: sci-biology/samri/ X-VCS-Committer: chymera X-VCS-Committer-Name: Horea Christian X-VCS-Revision: 30fcfb55431880f3525473433b4828862ab150d4 X-VCS-Branch: master Date: Thu, 6 Apr 2023 06:43:23 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Auto-Response-Suppress: DR, RN, NRN, OOF, AutoReply X-Archives-Salt: 82405770-64da-4497-829e-36f34d719024 X-Archives-Hash: 07abd13c6d33a6b2fa69b2245652a87a commit: 30fcfb55431880f3525473433b4828862ab150d4 Author: Horea Christian chymera eu> AuthorDate: Thu Apr 6 06:42:46 2023 +0000 Commit: Horea Christian gmail com> CommitDate: Thu Apr 6 06:42:46 2023 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=30fcfb55 sci-biology/samri: add 0.5.2 Signed-off-by: Horea Christian chymera.eu> sci-biology/samri/samri-0.5.2.ebuild | 78 ++++++++++++++++++++++++++++++++++++ 1 file changed, 78 insertions(+) diff --git a/sci-biology/samri/samri-0.5.2.ebuild b/sci-biology/samri/samri-0.5.2.ebuild new file mode 100644 index 000000000..56351ada3 --- /dev/null +++ b/sci-biology/samri/samri-0.5.2.ebuild @@ -0,0 +1,78 @@ +# Copyright 1999-2023 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +PYTHON_COMPAT=( python3_{10..10} ) +DISTUTILS_USE_PEP517=setuptools + +inherit distutils-r1 prefix + +DESCRIPTION="Small Animal Magnetic Resonance Imaging" +HOMEPAGE="https://github.com/IBT-FMI/SAMRI" +if [ "$PV" == "9999" ]; then + inherit git-r3 + EGIT_REPO_URI="https://github.com/IBT-FMI/SAMRI.git" +else + SRC_URI="https://github.com/IBT-FMI/SAMRI/archive/${PV}.tar.gz -> ${P}.tar.gz" + KEYWORDS="~amd64" + S="${WORKDIR}/SAMRI-${PV}" +fi + + +LICENSE="GPL-3" +SLOT="0" +IUSE="+atlases labbookdb" +REQUIRED_USE="test? ( atlases )" + +DEPEND=" + test? ( + sci-biology/samri_bidsdata + sci-biology/samri_bindata + ) + " +RDEPEND=" + dev-python/argh[${PYTHON_USEDEP}] + dev-python/joblib[${PYTHON_USEDEP}] + >=dev-python/matplotlib-2.0.2[${PYTHON_USEDEP}] + >=dev-python/numpy-1.13.3[${PYTHON_USEDEP}] + dev-python/pandas[${PYTHON_USEDEP}] + dev-python/scipy[${PYTHON_USEDEP}] + dev-python/seaborn[${PYTHON_USEDEP}] + dev-python/statsmodels[${PYTHON_USEDEP}] + >=media-gfx/blender-2.83.4 + >=sci-biology/fsl-5.0.9 + sci-biology/bru2nii + atlases? ( sci-biology/mouse-brain-templates ) + labbookdb? ( sci-libs/labbookdb[${PYTHON_USEDEP}] ) + sci-libs/nibabel[${PYTHON_USEDEP}] + >=sci-libs/nipy-0.4.1[${PYTHON_USEDEP}] + >=sci-libs/nipype-1.0.0[${PYTHON_USEDEP}] +