From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (2048 bits)) (No client certificate requested) by finch.gentoo.org (Postfix) with ESMTPS id 11D7B1580C6 for ; Wed, 5 Apr 2023 21:43:02 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id 20B12E077F; Wed, 5 Apr 2023 21:43:01 +0000 (UTC) Received: from smtp.gentoo.org (dev.gentoo.org [IPv6:2001:470:ea4a:1:5054:ff:fec7:86e4]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256) (No client certificate requested) by pigeon.gentoo.org (Postfix) with ESMTPS id 00A9BE077F for ; Wed, 5 Apr 2023 21:43:00 +0000 (UTC) Received: from oystercatcher.gentoo.org (oystercatcher.gentoo.org [148.251.78.52]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id E71F2340EBA for ; Wed, 5 Apr 2023 21:42:59 +0000 (UTC) Received: from localhost.localdomain (localhost [IPv6:::1]) by oystercatcher.gentoo.org (Postfix) with ESMTP id 793C98EB for ; Wed, 5 Apr 2023 21:42:57 +0000 (UTC) From: "Horea Christian" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Horea Christian" Message-ID: <1680730968.be5fc54187e2e93f78cafd5dfd9a553fe76d4642.chymera@gentoo> Subject: [gentoo-commits] proj/sci:master commit in: sci-biology/samri/ X-VCS-Repository: proj/sci X-VCS-Files: sci-biology/samri/samri-0.5.1.ebuild X-VCS-Directories: sci-biology/samri/ X-VCS-Committer: chymera X-VCS-Committer-Name: Horea Christian X-VCS-Revision: be5fc54187e2e93f78cafd5dfd9a553fe76d4642 X-VCS-Branch: master Date: Wed, 5 Apr 2023 21:42:57 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Auto-Response-Suppress: DR, RN, NRN, OOF, AutoReply X-Archives-Salt: 419d16d5-df40-4178-8f7b-68dac1bb987c X-Archives-Hash: 5cc777d563bf312e0022ea2ee47cdcbe commit: be5fc54187e2e93f78cafd5dfd9a553fe76d4642 Author: Horea Christian chymera eu> AuthorDate: Wed Apr 5 21:42:48 2023 +0000 Commit: Horea Christian gmail com> CommitDate: Wed Apr 5 21:42:48 2023 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=be5fc541 sci-biology/samri: add 0.5.1 Signed-off-by: Horea Christian chymera.eu> sci-biology/samri/samri-0.5.1.ebuild | 71 ++++++++++++++++++++++++++++++++++++ 1 file changed, 71 insertions(+) diff --git a/sci-biology/samri/samri-0.5.1.ebuild b/sci-biology/samri/samri-0.5.1.ebuild new file mode 100644 index 000000000..a20c63f61 --- /dev/null +++ b/sci-biology/samri/samri-0.5.1.ebuild @@ -0,0 +1,71 @@ +# Copyright 1999-2022 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +PYTHON_COMPAT=( python3_10 ) + +inherit distutils-r1 prefix + +DESCRIPTION="Small Animal Magnetic Resonance Imaging" +HOMEPAGE="https://github.com/IBT-FMI/SAMRI" +SRC_URI="https://github.com/IBT-FMI/SAMRI/archive/${PV}.tar.gz -> ${P}.tar.gz" +S="${WORKDIR}/SAMRI-${PV}" + +LICENSE="GPL-3" +SLOT="0" +KEYWORDS="~amd64" +IUSE="+atlases labbookdb" +REQUIRED_USE="test? ( atlases )" + +DEPEND=" + test? ( + sci-biology/samri_bidsdata + sci-biology/samri_bindata + ) + " +RDEPEND=" + dev-python/argh[${PYTHON_USEDEP}] + dev-python/joblib[${PYTHON_USEDEP}] + >=dev-python/matplotlib-2.0.2[${PYTHON_USEDEP}] + >=dev-python/numpy-1.13.3[${PYTHON_USEDEP}] + dev-python/pandas[${PYTHON_USEDEP}] + dev-python/scipy[${PYTHON_USEDEP}] + dev-python/seaborn[${PYTHON_USEDEP}] + dev-python/statsmodels[${PYTHON_USEDEP}] + >=media-gfx/blender-2.83.4 + >=sci-biology/fsl-5.0.9 + sci-biology/bru2nii + atlases? ( sci-biology/mouse-brain-templates ) + labbookdb? ( sci-libs/labbookdb[${PYTHON_USEDEP}] ) + sci-libs/nibabel[${PYTHON_USEDEP}] + >=sci-libs/nipy-0.4.1[${PYTHON_USEDEP}] + >=sci-libs/nipype-1.0.0[${PYTHON_USEDEP}] +