[gentoo-commits] proj/sci:master commit in: dev-python/snakemake/, profiles/

[gentoo-commits] proj/sci:master commit in: dev-python/snakemake/, profiles/

[Andrew Ammerlaan]

commit:     f853476e85be13cb1ac9f36e8fbb25ca5e12c464
Author:     Andrew Ammerlaan <andrewammerlaan <AT> gentoo <DOT> org>
AuthorDate: Fri Feb 10 12:36:50 2023 +0000
Commit:     Andrew Ammerlaan <andrewammerlaan <AT> gentoo <DOT> org>
CommitDate: Fri Feb 10 12:36:50 2023 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=f853476e

dev-python/snakemake: treeclean

Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> gentoo.org>

 dev-python/snakemake/metadata.xml            | 13 -------
 dev-python/snakemake/snakemake-5.32.2.ebuild | 56 ----------------------------
 profiles/package.mask                        |  1 -
 3 files changed, 70 deletions(-)

diff --git a/dev-python/snakemake/metadata.xml b/dev-python/snakemake/metadata.xml
deleted file mode 100644
index d9550c50f..000000000
--- a/dev-python/snakemake/metadata.xml
+++ /dev/null
@@ -1,13 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-	<maintainer type="person">
-		<email>mschu.dev@gmail.com</email>
-		<name>Michael Schubert</name>
-	</maintainer>
-	<upstream>
-		<remote-id type="bitbucket">johanneskoester/snakemake</remote-id>
-		<remote-id type="pypi">snakemake</remote-id>
-		<remote-id type="github">snakemake/snakemake</remote-id>
-	</upstream>
-</pkgmetadata>

diff --git a/dev-python/snakemake/snakemake-5.32.2.ebuild b/dev-python/snakemake/snakemake-5.32.2.ebuild
deleted file mode 100644
index 59d2f061a..000000000
--- a/dev-python/snakemake/snakemake-5.32.2.ebuild
+++ /dev/null
@@ -1,56 +0,0 @@
-# Copyright 1999-2022 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-PYTHON_COMPAT=( python3_{8..9} )
-DISTUTILS_USE_SETUPTOOLS=rdepend
-
-inherit distutils-r1
-
-DESCRIPTION="Make-like task language"
-HOMEPAGE="https://snakemake.readthedocs.io"
-SRC_URI="https://github.com/${PN}/${PN}/archive/v${PV}.tar.gz -> ${P}.tar.gz"
-
-LICENSE="MIT"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-
-# missing test dep google.cloud
-RESTRICT="test"
-
-BDEPEND="test? (
-	dev-python/requests-mock[${PYTHON_USEDEP}]
-	dev-python/google-api-python-client[${PYTHON_USEDEP}]
-	dev-python/jinja[${PYTHON_USEDEP}]
-	dev-python/networkx[${PYTHON_USEDEP}]
-	dev-python/pygments[${PYTHON_USEDEP}]
-	dev-python/pygraphviz[${PYTHON_USEDEP}]
-	dev-python/oauth2client[${PYTHON_USEDEP}]
-	net-libs/google-cloud-cpp
-)"
-
-RDEPEND="
-	dev-python/appdirs[${PYTHON_USEDEP}]
-	dev-python/ConfigArgParse[${PYTHON_USEDEP}]
-	dev-python/datrie[${PYTHON_USEDEP}]
-	dev-python/docutils[${PYTHON_USEDEP}]
-	dev-python/GitPython[${PYTHON_USEDEP}]
-	dev-python/jsonschema[${PYTHON_USEDEP}]
-	dev-python/nbformat[${PYTHON_USEDEP}]
-	dev-python/psutil[${PYTHON_USEDEP}]
-	dev-python/pyyaml[${PYTHON_USEDEP}]
-	dev-python/ratelimit[${PYTHON_USEDEP}]
-	dev-python/requests[${PYTHON_USEDEP}]
-	dev-python/toposort[${PYTHON_USEDEP}]
-	dev-python/wrapt[${PYTHON_USEDEP}]
-	sci-mathematics/pulp[${PYTHON_USEDEP}]
-"
-
-distutils_enable_sphinx docs \
-	dev-python/sphinxcontrib-napoleon \
-	dev-python/sphinx-argparse \
-	dev-python/sphinx_rtd_theme \
-	dev-python/docutils \
-	dev-python/recommonmark
-distutils_enable_tests pytest

diff --git a/profiles/package.mask b/profiles/package.mask
index 57a0e78af..2ce61c946 100644
--- a/profiles/package.mask
+++ b/profiles/package.mask
@@ -34,7 +34,6 @@
 # Needs bump of PYTHON_COMPAT to at least python3_10
 sci-biology/gffutils
 sci-biology/chiron
-dev-python/snakemake
 dev-python/kmapper
 # Reverse deps of above
 dev-python/ripser