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From: "Alexey Shvetsov" <alexxy@gentoo.org>
To: gentoo-commits@lists.gentoo.org
Subject: [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/MDAnalysis/
Date: Sun, 25 Dec 2022 22:15:06 +0000 (UTC)	[thread overview]
Message-ID: <1672006499.1b327b9680ee5a6b83e2f600aa177da6796152a5.alexxy@gentoo> (raw)

commit:     1b327b9680ee5a6b83e2f600aa177da6796152a5
Author:     Alexey Shvetsov <alexxy <AT> gentoo <DOT> org>
AuthorDate: Sun Dec 25 22:13:18 2022 +0000
Commit:     Alexey Shvetsov <alexxy <AT> gentoo <DOT> org>
CommitDate: Sun Dec 25 22:14:59 2022 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=1b327b96

sci-chemistry/MDAnalysis: Version bump. No longer depend on nose

Closes: https://bugs.gentoo.org/765160
Closes: https://bugs.gentoo.org/878723
Signed-off-by: Alexey Shvetsov <alexxy <AT> gentoo.org>

 sci-chemistry/MDAnalysis/MDAnalysis-1.0.0.ebuild   | 37 ----------------------
 ...alysis-2.0.0.ebuild => MDAnalysis-2.4.1.ebuild} |  6 ++--
 sci-chemistry/MDAnalysis/Manifest                  |  3 +-
 3 files changed, 5 insertions(+), 41 deletions(-)

diff --git a/sci-chemistry/MDAnalysis/MDAnalysis-1.0.0.ebuild b/sci-chemistry/MDAnalysis/MDAnalysis-1.0.0.ebuild
deleted file mode 100644
index 1f9c2ac3aa5e..000000000000
--- a/sci-chemistry/MDAnalysis/MDAnalysis-1.0.0.ebuild
+++ /dev/null
@@ -1,37 +0,0 @@
-# Copyright 1999-2022 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-PYTHON_COMPAT=( python3_{7..10} )
-
-inherit distutils-r1
-
-DESCRIPTION="A python library to analyze and manipulate molecular dynamics trajectories"
-HOMEPAGE="https://www.mdanalysis.org"
-SRC_URI="mirror://pypi/M/${PN}/${P}.tar.gz"
-
-SLOT="0"
-LICENSE="GPL-2"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
-IUSE="test"
-
-RDEPEND="
-	>=dev-python/numpy-1.13.3[${PYTHON_USEDEP}]
-	>=dev-python/scipy-1.0.0[${PYTHON_USEDEP}]
-	>=sci-biology/biopython-1.71[${PYTHON_USEDEP}]
-	>=dev-python/networkx-1.0[${PYTHON_USEDEP}]
-	>=dev-python/GridDataFormats-0.4.0[${PYTHON_USEDEP}]
-	>=dev-python/joblib-0.12[${PYTHON_USEDEP}]
-	>=dev-python/matplotlib-1.5.1[${PYTHON_USEDEP}]
-	dev-python/netcdf4-python[${PYTHON_USEDEP}]
-	>=dev-python/mmtf-python-1.0.0[${PYTHON_USEDEP}]
-	>=dev-python/gsd-1.9.3[${PYTHON_USEDEP}]
-	dev-python/mock[${PYTHON_USEDEP}]
-	dev-python/duecredit[${PYTHON_USEDEP}]
-	>=dev-python/six-1.4.0[${PYTHON_USEDEP}]
-	>=dev-python/tqdm-4.43.0[${PYTHON_USEDEP}]
-"
-BDEPEND="${RDEPEND}"
-
-distutils_enable_tests nose

diff --git a/sci-chemistry/MDAnalysis/MDAnalysis-2.0.0.ebuild b/sci-chemistry/MDAnalysis/MDAnalysis-2.4.1.ebuild
similarity index 91%
rename from sci-chemistry/MDAnalysis/MDAnalysis-2.0.0.ebuild
rename to sci-chemistry/MDAnalysis/MDAnalysis-2.4.1.ebuild
index aee4e82b683e..5d561772ca51 100644
--- a/sci-chemistry/MDAnalysis/MDAnalysis-2.0.0.ebuild
+++ b/sci-chemistry/MDAnalysis/MDAnalysis-2.4.1.ebuild
@@ -1,10 +1,12 @@
-# Copyright 1999-2021 Gentoo Authors
+# Copyright 1999-2022 Gentoo Authors
 # Distributed under the terms of the GNU General Public License v2
 
 EAPI=8
 
 PYTHON_COMPAT=( python3_{8..10} )
 
+DISTUTILS_USE_PEP517=setuptools
+
 inherit distutils-r1
 
 DESCRIPTION="A python library to analyze and manipulate molecular dynamics trajectories"
@@ -34,4 +36,4 @@ RDEPEND="
 "
 BDEPEND="${RDEPEND}"
 
-distutils_enable_tests nose
+distutils_enable_tests pytest

diff --git a/sci-chemistry/MDAnalysis/Manifest b/sci-chemistry/MDAnalysis/Manifest
index 721870b0e526..81a4e8053d86 100644
--- a/sci-chemistry/MDAnalysis/Manifest
+++ b/sci-chemistry/MDAnalysis/Manifest
@@ -1,2 +1 @@
-DIST MDAnalysis-1.0.0.tar.gz 19552874 BLAKE2B dab625a898d71a67a37ac5b58eb23ded9487f475e3c76f6c335a0ed5b32a43785d0473d089fcfc56c07263d82248bf5ee7b50c513441b10fc97f97b49411cc5f SHA512 4a001f45695308dd5f296bd2850d5d585c065e6b0f55efca65d91e452d78c85f13fd614eca0176a8d330e14a1c9e8ccbb919c3d4ae995b1945d09dc3ad687195
-DIST MDAnalysis-2.0.0.tar.gz 3436654 BLAKE2B b29734dd61bfa1e4e1d6ead0eb9a2d00869d1adce18edf95b9368bdcc16b0d71d0d6536a7df48787034a623bf52585e1636842dcaaa9dde08a69576868c1657b SHA512 037eb3c709b9ddbdb2ba9b26a6632ff99a95331c3968176573076e4e208c8644c3ea262e1e9880f185eb080ff90180d887444cab0dfbfad04fc254d87f1ff986
+DIST MDAnalysis-2.4.1.tar.gz 3746899 BLAKE2B af63f74a31dcde8a68cbffe5158f2f955d5eda1345bcff6a19e8df3284101b1e85006de3326d29d4fe1867dc6b0c5f55467b9e3242704f97440c6a43b52f47b8 SHA512 796dad98c26bd36f30db166bea5ff782aa5e3ac5cddb1675b628fb753a4f645fb27e06d3986047e2ba21a22cd91f96d0ba8e529256ed960a2b7cf95204076927


             reply	other threads:[~2022-12-25 22:15 UTC|newest]

Thread overview: 17+ messages / expand[flat|nested]  mbox.gz  Atom feed  top
2022-12-25 22:15 Alexey Shvetsov [this message]
  -- strict thread matches above, loose matches on Subject: below --
2024-06-05 17:27 [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/MDAnalysis/ Alexey Shvetsov
2023-10-14  6:17 Alexey Shvetsov
2023-05-20 11:36 Pacho Ramos
2023-05-20  6:31 Michał Górny
2023-05-20  6:31 Michał Górny
2023-05-02 18:42 Pacho Ramos
2023-03-17 15:29 Michał Górny
2022-01-13 16:15 Alexey Shvetsov
2021-12-28 14:15 Andrew Ammerlaan
2021-01-18 10:14 David Seifert
2021-01-12 20:25 Pacho Ramos
2019-12-26 20:46 David Seifert
2019-11-17 15:12 Alexey Shvetsov
2018-06-28 12:20 Alexey Shvetsov
2018-05-16 22:57 [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/mdanalysis/ Aaron Bauman
2015-09-01 20:06 Tobias Klausmann

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