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From: "Horea Christian" <horea.christ@gmail.com>
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Message-ID: <1663225420.4d36e47773d01a0d4d91d2eee5d2701dcdebe9d0.chymera@gentoo>
Subject: [gentoo-commits] proj/sci:master commit in: sci-biology/ants/
X-VCS-Repository: proj/sci
X-VCS-Files: sci-biology/ants/ants-2.3.4.ebuild
X-VCS-Directories: sci-biology/ants/
X-VCS-Committer: chymera
X-VCS-Committer-Name: Horea Christian
X-VCS-Revision: 4d36e47773d01a0d4d91d2eee5d2701dcdebe9d0
X-VCS-Branch: master
Date: Thu, 15 Sep 2022 07:03:54 +0000 (UTC)
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commit: 4d36e47773d01a0d4d91d2eee5d2701dcdebe9d0
Author: Horea Christian <chr <AT> chymera <DOT> eu>
AuthorDate: Thu Sep 15 07:03:40 2022 +0000
Commit: Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Thu Sep 15 07:03:40 2022 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=4d36e477
sci-biology/ants: add 2.3.4
Signed-off-by: Horea Christian <chr <AT> chymera.eu>
sci-biology/ants/ants-2.3.4.ebuild | 78 ++++++++++++++++++++++++++++++++++++++
1 file changed, 78 insertions(+)
diff --git a/sci-biology/ants/ants-2.3.4.ebuild b/sci-biology/ants/ants-2.3.4.ebuild
new file mode 100644
index 000000000..95eb6355b
--- /dev/null
+++ b/sci-biology/ants/ants-2.3.4.ebuild
@@ -0,0 +1,78 @@
+# Copyright 1999-2021 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+
+CMAKE_MAKEFILE_GENERATOR="emake"
+
+inherit cmake
+
+MY_PN="ANTs"
+
+DESCRIPTION="Advanced Normalitazion Tools for neuroimaging"
+HOMEPAGE="http://stnava.github.io/ANTs/"
+SRC_URI="
+ https://github.com/ANTsX/ANTs/archive/v${PV}.tar.gz -> ${P}.tar.gz
+ test? (
+ http://resources.chymera.eu/distfiles/ants_testdata-${PV}.tar.xz
+ )
+"
+
+SLOT="0"
+LICENSE="BSD"
+KEYWORDS="~amd64 ~x86"
+IUSE="test vtk"
+RESTRICT="!test? ( test )"
+
+DEPEND="
+ vtk? (
+ ~sci-libs/itk-5.1.0[vtkglue]
+ sci-libs/vtk
+ )
+ !vtk? ( ~sci-libs/itk-5.1.0 )
+"
+RDEPEND="${DEPEND}"
+
+PATCHES=(
+ "${FILESDIR}/${P}-version.patch"
+ "${FILESDIR}/${P}-libdir.patch"
+)
+
+S="${WORKDIR}/${MY_PN}-${PV}"
+
+src_unpack() {
+ default
+ if use test; then
+ mkdir -p "${S}/.ExternalData/MD5" || die "Could not create test data directory."
+ tar xvf "${DISTDIR}/ants_testdata-${PV}.tar.xz" -C "${S}/.ExternalData/MD5/" > /dev/null || die "Could not unpack test data."
+ fi
+}
+
+src_configure() {
+ local mycmakeargs=(
+ -DUSE_SYSTEM_ITK=ON
+ -DITK_DIR="${EPREFIX}/usr/include/ITK-5.1/"
+ -DBUILD_TESTING="$(usex test ON OFF)"
+ -DUSE_VTK=$(usex vtk ON OFF)
+ -DUSE_SYSTEM_VTK=$(usex vtk ON OFF)
+ -DANTS_SNAPSHOT_VERSION:STRING=${PV}
+ )
+ use vtk && mycmakeargs+=(
+ -DVTK_DIR="${EPREFIX}/usr/include/vtk-8.1/"
+ )
+ use test && mycmakeargs+=(
+ -DExternalData_OBJECT_STORES="${S}/.ExternalData/MD5"
+ )
+ cmake_src_configure
+}
+
+src_install() {
+ BUILD_DIR="${WORKDIR}/${P}_build/ANTS-build"
+ cmake_src_install
+ cd "${S}/Scripts" || die "scripts dir not found"
+ dobin *.sh
+ dodir /usr/$(get_libdir)/ants
+ insinto "/usr/$(get_libdir)/ants"
+ doins *
+ doenvd "${FILESDIR}"/99ants
+}