* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/autodock_vina/
@ 2015-08-16 11:34 Justin Lecher
0 siblings, 0 replies; 8+ messages in thread
From: Justin Lecher @ 2015-08-16 11:34 UTC (permalink / raw
To: gentoo-commits
commit: 1736183b6d7f2f753c9b275bd1d7085e0549705f
Author: Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Sun Aug 16 11:33:39 2015 +0000
Commit: Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Sun Aug 16 11:34:13 2015 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=1736183b
sci-chemistry/autodock_vina: Require thread support in boost, bug #557822
Package-Manager: portage-2.2.20.1
Signed-off-by: Justin Lecher <jlec <AT> gentoo.org>
sci-chemistry/autodock_vina/autodock_vina-1.1.2.ebuild | 6 +++---
1 file changed, 3 insertions(+), 3 deletions(-)
diff --git a/sci-chemistry/autodock_vina/autodock_vina-1.1.2.ebuild b/sci-chemistry/autodock_vina/autodock_vina-1.1.2.ebuild
index aea218f..a5662a1 100644
--- a/sci-chemistry/autodock_vina/autodock_vina-1.1.2.ebuild
+++ b/sci-chemistry/autodock_vina/autodock_vina-1.1.2.ebuild
@@ -1,8 +1,8 @@
-# Copyright 1999-2013 Gentoo Foundation
+# Copyright 1999-2015 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Id$
-EAPI=4
+EAPI=5
inherit eutils flag-o-matic versionator
@@ -17,7 +17,7 @@ KEYWORDS="amd64 x86"
LICENSE="Apache-2.0"
IUSE="debug"
-RDEPEND="dev-libs/boost"
+RDEPEND="dev-libs/boost[threads]"
DEPEND="${RDEPEND}"
S="${WORKDIR}"/${MY_P}/build/linux/release
^ permalink raw reply related [flat|nested] 8+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/autodock_vina/
@ 2021-05-16 17:35 Andreas Sturmlechner
0 siblings, 0 replies; 8+ messages in thread
From: Andreas Sturmlechner @ 2021-05-16 17:35 UTC (permalink / raw
To: gentoo-commits
commit: 94ad7eb2a2a84490626fe423556e8c15bb93a8b6
Author: Andreas Sturmlechner <asturm <AT> gentoo <DOT> org>
AuthorDate: Sun May 16 17:34:33 2021 +0000
Commit: Andreas Sturmlechner <asturm <AT> gentoo <DOT> org>
CommitDate: Sun May 16 17:34:50 2021 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=94ad7eb2
sci-chemistry/autodock_vina: Fix build w/ boost-1.69
Closes: https://bugs.gentoo.org/789702
Package-Manager: Portage-3.0.18, Repoman-3.0.3
Signed-off-by: Andreas Sturmlechner <asturm <AT> gentoo.org>
sci-chemistry/autodock_vina/autodock_vina-1.1.2.ebuild | 7 +++----
1 file changed, 3 insertions(+), 4 deletions(-)
diff --git a/sci-chemistry/autodock_vina/autodock_vina-1.1.2.ebuild b/sci-chemistry/autodock_vina/autodock_vina-1.1.2.ebuild
index 354d80938d4..19a6a106be7 100644
--- a/sci-chemistry/autodock_vina/autodock_vina-1.1.2.ebuild
+++ b/sci-chemistry/autodock_vina/autodock_vina-1.1.2.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2020 Gentoo Authors
+# Copyright 1999-2021 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=7
@@ -33,15 +33,14 @@ src_prepare() {
}
src_configure() {
- use debug || c_options="-DNDEBUG"
- append-cxxflags -DBOOST_FILESYSTEM_VERSION=3
+ append-cxxflags -DBOOST_FILESYSTEM_VERSION=3 -std=c++11
}
src_compile() {
emake \
BASE="${EPREFIX}"/usr/ \
GPP="$(tc-getCXX)" \
- C_OPTIONS="${c_options}"
+ C_OPTIONS=$(usex debug '' -DNDEBUG)
}
src_install() {
^ permalink raw reply related [flat|nested] 8+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/autodock_vina/
@ 2021-06-18 19:18 David Seifert
0 siblings, 0 replies; 8+ messages in thread
From: David Seifert @ 2021-06-18 19:18 UTC (permalink / raw
To: gentoo-commits
commit: c3f45d09f47f9f2438f0ba723920b31927c35dae
Author: David Seifert <soap <AT> gentoo <DOT> org>
AuthorDate: Fri Jun 18 19:17:23 2021 +0000
Commit: David Seifert <soap <AT> gentoo <DOT> org>
CommitDate: Fri Jun 18 19:17:23 2021 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=c3f45d09
sci-chemistry/autodock_vina: Depend on dev-libs/boost:=[threads(+)]
Package-Manager: Portage-3.0.20, Repoman-3.0.3
Signed-off-by: David Seifert <soap <AT> gentoo.org>
.../{autodock_vina-1.1.2.ebuild => autodock_vina-1.1.2-r1.ebuild} | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/sci-chemistry/autodock_vina/autodock_vina-1.1.2.ebuild b/sci-chemistry/autodock_vina/autodock_vina-1.1.2-r1.ebuild
similarity index 95%
rename from sci-chemistry/autodock_vina/autodock_vina-1.1.2.ebuild
rename to sci-chemistry/autodock_vina/autodock_vina-1.1.2-r1.ebuild
index 19a6a106be7..a1782463270 100644
--- a/sci-chemistry/autodock_vina/autodock_vina-1.1.2.ebuild
+++ b/sci-chemistry/autodock_vina/autodock_vina-1.1.2-r1.ebuild
@@ -16,7 +16,7 @@ SLOT="0"
KEYWORDS="amd64 x86"
IUSE="debug"
-RDEPEND="dev-libs/boost:=[threads]"
+RDEPEND="dev-libs/boost:=[threads(+)]"
DEPEND="${RDEPEND}"
S="${WORKDIR}"/${MY_P}/build/linux/release
^ permalink raw reply related [flat|nested] 8+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/autodock_vina/
@ 2022-01-08 13:16 David Seifert
0 siblings, 0 replies; 8+ messages in thread
From: David Seifert @ 2022-01-08 13:16 UTC (permalink / raw
To: gentoo-commits
commit: 4f6e0e4795d857ac2464334ec627a3856021ab44
Author: David Seifert <soap <AT> gentoo <DOT> org>
AuthorDate: Sat Jan 8 13:16:04 2022 +0000
Commit: David Seifert <soap <AT> gentoo <DOT> org>
CommitDate: Sat Jan 8 13:16:04 2022 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=4f6e0e47
sci-chemistry/autodock_vina: remove useless <use> description
Signed-off-by: David Seifert <soap <AT> gentoo.org>
sci-chemistry/autodock_vina/metadata.xml | 7 -------
1 file changed, 7 deletions(-)
diff --git a/sci-chemistry/autodock_vina/metadata.xml b/sci-chemistry/autodock_vina/metadata.xml
index f603fd62c191..f29cb87a5701 100644
--- a/sci-chemistry/autodock_vina/metadata.xml
+++ b/sci-chemistry/autodock_vina/metadata.xml
@@ -17,11 +17,4 @@
multithreading
Journal of Computational Chemistry 31 (2010) 455-461
</longdescription>
- <!--
- <use>
- <flag name='flag'>Description of how USE='flag' affects this package</flag>
- <flag name='userland_GNU'>Description of how USERLAND='GNU' affects this package</flag>
- <flag name='aspell'>Uses <pkg>app-text/aspell</pkg> for spell checking. Requires an installed dictionary from <cat>app-dicts</cat></flag>
- </use>
- -->
</pkgmetadata>
^ permalink raw reply related [flat|nested] 8+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/autodock_vina/
@ 2022-09-04 12:23 David Seifert
0 siblings, 0 replies; 8+ messages in thread
From: David Seifert @ 2022-09-04 12:23 UTC (permalink / raw
To: gentoo-commits
commit: 065341128da7f5a3d89dab94c1fc4c92ef7cb1ea
Author: David Seifert <soap <AT> gentoo <DOT> org>
AuthorDate: Sun Sep 4 12:22:28 2022 +0000
Commit: David Seifert <soap <AT> gentoo <DOT> org>
CommitDate: Sun Sep 4 12:22:28 2022 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=06534112
sci-chemistry/autodock_vina: remove boost[threads(+)] usedep
Signed-off-by: David Seifert <soap <AT> gentoo.org>
sci-chemistry/autodock_vina/autodock_vina-1.1.2-r1.ebuild | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/sci-chemistry/autodock_vina/autodock_vina-1.1.2-r1.ebuild b/sci-chemistry/autodock_vina/autodock_vina-1.1.2-r1.ebuild
index a1782463270a..5e1ce226e6a7 100644
--- a/sci-chemistry/autodock_vina/autodock_vina-1.1.2-r1.ebuild
+++ b/sci-chemistry/autodock_vina/autodock_vina-1.1.2-r1.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2021 Gentoo Authors
+# Copyright 1999-2022 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=7
@@ -16,7 +16,7 @@ SLOT="0"
KEYWORDS="amd64 x86"
IUSE="debug"
-RDEPEND="dev-libs/boost:=[threads(+)]"
+RDEPEND="dev-libs/boost:="
DEPEND="${RDEPEND}"
S="${WORKDIR}"/${MY_P}/build/linux/release
^ permalink raw reply related [flat|nested] 8+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/autodock_vina/
@ 2024-03-02 21:15 Alexey Shvetsov
0 siblings, 0 replies; 8+ messages in thread
From: Alexey Shvetsov @ 2024-03-02 21:15 UTC (permalink / raw
To: gentoo-commits
commit: 8ff06565cfa9e2d6114008541f2fae2c23f9e12c
Author: Alexey Shvetsov <alexxy <AT> gentoo <DOT> org>
AuthorDate: Sat Mar 2 21:14:38 2024 +0000
Commit: Alexey Shvetsov <alexxy <AT> gentoo <DOT> org>
CommitDate: Sat Mar 2 21:14:38 2024 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=8ff06565
sci-chemistry/autodock_vina: Fix build with recent boost
Closes: https://bugs.gentoo.org/913037
Closes: https://bugs.gentoo.org/924622
Signed-off-by: Alexey Shvetsov <alexxy <AT> gentoo.org>
sci-chemistry/autodock_vina/autodock_vina-1.1.2-r1.ebuild | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/sci-chemistry/autodock_vina/autodock_vina-1.1.2-r1.ebuild b/sci-chemistry/autodock_vina/autodock_vina-1.1.2-r1.ebuild
index a6495591339a..63810da09284 100644
--- a/sci-chemistry/autodock_vina/autodock_vina-1.1.2-r1.ebuild
+++ b/sci-chemistry/autodock_vina/autodock_vina-1.1.2-r1.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2023 Gentoo Authors
+# Copyright 1999-2024 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=7
@@ -33,7 +33,7 @@ src_prepare() {
}
src_configure() {
- append-cxxflags -DBOOST_FILESYSTEM_VERSION=3 -std=c++11
+ append-cxxflags -DBOOST_FILESYSTEM_VERSION=3 -DBOOST_TIMER_ENABLE_DEPRECATED -std=c++14
}
src_compile() {
^ permalink raw reply related [flat|nested] 8+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/autodock_vina/
@ 2024-03-26 11:01 Alexey Shvetsov
0 siblings, 0 replies; 8+ messages in thread
From: Alexey Shvetsov @ 2024-03-26 11:01 UTC (permalink / raw
To: gentoo-commits
commit: e946f4c6951ed2ea86b806b3bef37b8c5ba7af01
Author: Alexey Shvetsov <alexxy <AT> gentoo <DOT> org>
AuthorDate: Tue Mar 5 10:57:33 2024 +0000
Commit: Alexey Shvetsov <alexxy <AT> gentoo <DOT> org>
CommitDate: Tue Mar 26 10:53:17 2024 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=e946f4c6
sci-chemistry/autodock_vina: add github upstream metadata
Signed-off-by: Alexey Shvetsov <alexxy <AT> gentoo.org>
sci-chemistry/autodock_vina/metadata.xml | 3 +++
1 file changed, 3 insertions(+)
diff --git a/sci-chemistry/autodock_vina/metadata.xml b/sci-chemistry/autodock_vina/metadata.xml
index f29cb87a5701..ec0a09453889 100644
--- a/sci-chemistry/autodock_vina/metadata.xml
+++ b/sci-chemistry/autodock_vina/metadata.xml
@@ -17,4 +17,7 @@
multithreading
Journal of Computational Chemistry 31 (2010) 455-461
</longdescription>
+ <upstream>
+ <remote-id type="github">ccsb-scripps/AutoDock-Vina</remote-id>
+ </upstream>
</pkgmetadata>
^ permalink raw reply related [flat|nested] 8+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/autodock_vina/
@ 2024-07-13 5:22 Arthur Zamarin
0 siblings, 0 replies; 8+ messages in thread
From: Arthur Zamarin @ 2024-07-13 5:22 UTC (permalink / raw
To: gentoo-commits
commit: f5b9787ed57d24652fe4a8dc8401d35bd78c7b99
Author: Arthur Zamarin <arthurzam <AT> gentoo <DOT> org>
AuthorDate: Sat Jul 13 05:22:16 2024 +0000
Commit: Arthur Zamarin <arthurzam <AT> gentoo <DOT> org>
CommitDate: Sat Jul 13 05:22:16 2024 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=f5b9787e
sci-chemistry/autodock_vina: Stabilize 1.2.5 amd64, #935909
Signed-off-by: Arthur Zamarin <arthurzam <AT> gentoo.org>
sci-chemistry/autodock_vina/autodock_vina-1.2.5.ebuild | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/sci-chemistry/autodock_vina/autodock_vina-1.2.5.ebuild b/sci-chemistry/autodock_vina/autodock_vina-1.2.5.ebuild
index a74066d3963a..dd396732c357 100644
--- a/sci-chemistry/autodock_vina/autodock_vina-1.2.5.ebuild
+++ b/sci-chemistry/autodock_vina/autodock_vina-1.2.5.ebuild
@@ -15,7 +15,7 @@ S="${WORKDIR}/${MY_PN}-${PV}/build/linux/release"
LICENSE="Apache-2.0"
SLOT="0"
-KEYWORDS="~amd64 ~x86"
+KEYWORDS="amd64 ~x86"
IUSE="debug"
RDEPEND="dev-libs/boost:="
^ permalink raw reply related [flat|nested] 8+ messages in thread
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