[gentoo-commits] proj/sci:master commit in: dev-python/pynwb/

["Horea Christian" <horea.christ@gmail.com>]

commit:     872c4f1ee5cfda29b12acc7ed09a923502d25484
Author:     Horea Christian <chr <AT> chymera <DOT> eu>
AuthorDate: Tue Jul 12 14:40:13 2022 +0000
Commit:     Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Tue Jul 12 14:40:13 2022 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=872c4f1e

dev-python/pynwb: version bump

Package-Manager: Portage-3.0.30, Repoman-3.0.3
Signed-off-by: Horea Christian <chr <AT> chymera.eu>

 dev-python/pynwb/metadata.xml       |  4 ++++
 dev-python/pynwb/pynwb-2.0.1.ebuild | 39 +++++++++++++++++++++++++++++++++++++
 2 files changed, 43 insertions(+)

diff --git a/dev-python/pynwb/metadata.xml b/dev-python/pynwb/metadata.xml
index 99512b574..1e30097b2 100644
--- a/dev-python/pynwb/metadata.xml
+++ b/dev-python/pynwb/metadata.xml
@@ -17,4 +17,8 @@
 		data, focused on the dynamics of groups of neurons measured under a
 		large range of experimental conditions.
 	</longdescription>
+	<upstream>
+		<remote-id type="pypi">pynwb</remote-id>
+		<remote-id type="github">NeurodataWithoutBorders/pynwb</remote-id>
+	</upstream>
 </pkgmetadata>

diff --git a/dev-python/pynwb/pynwb-2.0.1.ebuild b/dev-python/pynwb/pynwb-2.0.1.ebuild
new file mode 100644
index 000000000..9f84bdb80
--- /dev/null
+++ b/dev-python/pynwb/pynwb-2.0.1.ebuild
@@ -0,0 +1,39 @@
+# Copyright 1999-2022 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=8
+
+DISTUTILS_USE_PEP517=setuptools
+PYTHON_COMPAT=( python3_{8..10} )
+inherit distutils-r1
+
+DESCRIPTION="A Python API for working with Neurodata stored in the NWB Format "
+HOMEPAGE="https://github.com/NeurodataWithoutBorders/pynwb"
+SRC_URI="https://github.com/NeurodataWithoutBorders/pynwb/releases/download/${PV}/${P}.tar.gz"
+
+SLOT="0"
+LICENSE="BSD"
+KEYWORDS="~amd64 ~x86"
+
+RDEPEND="
+	sci-libs/hdf5[ros3(-)]
+	dev-python/hdmf[${PYTHON_USEDEP}]
+	dev-python/h5py[${PYTHON_USEDEP}]
+	dev-python/numpy[${PYTHON_USEDEP}]
+	dev-python/pandas[${PYTHON_USEDEP}]
+	dev-python/python-dateutil[${PYTHON_USEDEP}]
+	"
+BDEPEND=""
+
+EPYTEST_DESELECT=(
+	# Reported upsream:
+	# https://github.com/dandi/dandischema/issues/87
+	tests/validation/test_validate.py::TestValidateScript::test_validate_file_cached
+	tests/validation/test_validate.py::TestValidateScript::test_validate_file_cached_bad_ns
+	tests/validation/test_validate.py::TestValidateScript::test_validate_file_cached_hdmf_common
+	tests/validation/test_validate.py::TestValidateScript::test_validate_file_cached_ignore
+	tests/validation/test_validate.py::TestValidateScript::test_validate_file_no_cache
+	tests/validation/test_validate.py::TestValidateScript::test_validate_file_no_cache_bad_ns
+)
+
+distutils_enable_tests pytest