[gentoo-commits] repo/gentoo:master commit in: sci-biology/prodigal/

[gentoo-commits] repo/gentoo:master commit in: sci-biology/prodigal/

[David Seifert]

commit:     4fbb13acb672fe5e6deed1d248ea4372b1d67d0d
Author:     David Seifert <soap <AT> gentoo <DOT> org>
AuthorDate: Sat Feb 25 22:39:31 2017 +0000
Commit:     David Seifert <soap <AT> gentoo <DOT> org>
CommitDate: Sat Feb 25 22:40:06 2017 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=4fbb13ac

sci-biology/prodigal: Remove old

Package-Manager: Portage-2.3.3, Repoman-2.3.1

 sci-biology/prodigal/Manifest             |  2 --
 sci-biology/prodigal/prodigal-2.50.ebuild | 30 ------------------------------
 sci-biology/prodigal/prodigal-2.60.ebuild | 30 ------------------------------
 3 files changed, 62 deletions(-)

diff --git a/sci-biology/prodigal/Manifest b/sci-biology/prodigal/Manifest
index f689f26e0f..59719d7432 100644
--- a/sci-biology/prodigal/Manifest
+++ b/sci-biology/prodigal/Manifest
@@ -1,3 +1 @@
 DIST prodigal-2.6.3.tar.gz 610934 SHA256 89094ad4bff5a8a8732d899f31cec350f5a4c27bcbdd12663f87c9d1f0ec599f SHA512 6d6ec310143c50c0d65dbdbd26d6d271839bb23b1da376ecef20059731a9e643d631613eccaac2eb548b295264b9fe58c21b083f1511a6554912cb7d5351d541 WHIRLPOOL d218510194777a15699cde33641768b24844e2077a1f63274a9d02c0d494c0d854dbbcf638df92839acd89916af63267d8e50b307a325f2e8026023675050fec
-DIST prodigal.v2_50.tar.gz 496654 SHA256 0220dcc740c49941f9c2536b3aa81d3193f885bfd05c694f805d90d2cefbc421 SHA512 b0f513148d9db7a5e29df010db535ea73b6609094f7a8753c5fccca821ee7b2b326a88b32ab3931e937df76f0cd4451f08d3449cf845f95d98557e44f9b8b923 WHIRLPOOL eb57b0448fd12c95ef54e09e374caed602c71c5deed90ded65ab8cf605494a0032b183cb293a5e6e4560f6e1beb4198333d2868ed53181a749778cafd5c49ab5
-DIST prodigal.v2_60.tar.gz 615326 SHA256 f18b093e0ac3b9ba40fc4d7bb76c2e20f2edb6d265451c82e3396138c9aac331 SHA512 35441bbc36982c82389cb7f5060513b8be7686ef3f4328f63ea16c57d5914b7e7a25602b488769967fd759793784f6e44dce78c8eb1dd5ab739610031cd7fc81 WHIRLPOOL 2a866a81de298f0e7f225c345e9a4a0e851c179988825404f99964af6023ec22b1c5e117c847f30a0da510f4b78a5a9c3cab56105099ee5428a4eea276afa11a

diff --git a/sci-biology/prodigal/prodigal-2.50.ebuild b/sci-biology/prodigal/prodigal-2.50.ebuild
deleted file mode 100644
index 6da0b0000c..0000000000
--- a/sci-biology/prodigal/prodigal-2.50.ebuild
+++ /dev/null
@@ -1,30 +0,0 @@
-# Copyright 1999-2011 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Id$
-
-EAPI="2"
-
-MY_PV=${PV//./_}
-
-DESCRIPTION="Prokaryotic Dynamic Programming Genefinding Algorithm"
-HOMEPAGE="http://prodigal.ornl.gov/ https://code.google.com/p/prodigal/"
-SRC_URI="https://prodigal.googlecode.com/files/prodigal.v${MY_PV}.tar.gz"
-
-LICENSE="GPL-3"
-SLOT="0"
-KEYWORDS="~amd64"
-IUSE=""
-
-DEPEND=""
-RDEPEND=""
-
-S="${WORKDIR}/prodigal.v${MY_PV}"
-
-src_prepare() {
-	sed -i -e 's/CFLAGS=/CFLAGS+=/' -e 's/LDFLAGS=/LDFLAGS+=/' Makefile || die
-}
-
-src_install() {
-	dobin prodigal
-	dodoc README CHANGES
-}

diff --git a/sci-biology/prodigal/prodigal-2.60.ebuild b/sci-biology/prodigal/prodigal-2.60.ebuild
deleted file mode 100644
index eb0100b060..0000000000
--- a/sci-biology/prodigal/prodigal-2.60.ebuild
+++ /dev/null
@@ -1,30 +0,0 @@
-# Copyright 1999-2012 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Id$
-
-EAPI="2"
-
-MY_PV=${PV//./_}
-
-DESCRIPTION="Prokaryotic Dynamic Programming Genefinding Algorithm"
-HOMEPAGE="http://prodigal.ornl.gov/ https://code.google.com/p/prodigal/"
-SRC_URI="https://prodigal.googlecode.com/files/prodigal.v${MY_PV}.tar.gz"
-
-LICENSE="GPL-3"
-SLOT="0"
-KEYWORDS="~amd64"
-IUSE=""
-
-DEPEND=""
-RDEPEND=""
-
-S="${WORKDIR}/prodigal.v${MY_PV}"
-
-src_prepare() {
-	sed -i -e 's/CFLAGS=/CFLAGS+=/' -e 's/LDFLAGS=/LDFLAGS+=/' Makefile || die
-}
-
-src_install() {
-	dobin prodigal
-	dodoc README CHANGES
-}

[gentoo-commits] repo/gentoo:master commit in: sci-biology/prodigal/

[David Seifert]

commit:     f06de855d4149693e193279f162303361da4e26e
Author:     David Seifert <soap <AT> gentoo <DOT> org>
AuthorDate: Thu Jul  7 19:57:09 2022 +0000
Commit:     David Seifert <soap <AT> gentoo <DOT> org>
CommitDate: Thu Jul  7 19:57:09 2022 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=f06de855

sci-biology/prodigal: update EAPI 6 -> 8

Signed-off-by: David Seifert <soap <AT> gentoo.org>

 .../{prodigal-2.6.3.ebuild => prodigal-2.6.3-r1.ebuild}       | 11 +++--------
 1 file changed, 3 insertions(+), 8 deletions(-)

diff --git a/sci-biology/prodigal/prodigal-2.6.3.ebuild b/sci-biology/prodigal/prodigal-2.6.3-r1.ebuild
similarity index 81%
rename from sci-biology/prodigal/prodigal-2.6.3.ebuild
rename to sci-biology/prodigal/prodigal-2.6.3-r1.ebuild
index db8382982284..8428da82c5e7 100644
--- a/sci-biology/prodigal/prodigal-2.6.3.ebuild
+++ b/sci-biology/prodigal/prodigal-2.6.3-r1.ebuild
@@ -1,23 +1,18 @@
-# Copyright 1999-2017 Gentoo Foundation
+# Copyright 1999-2022 Gentoo Authors
 # Distributed under the terms of the GNU General Public License v2
 
-EAPI=6
+EAPI=8
 
 inherit toolchain-funcs
 
 DESCRIPTION="Prokaryotic Dynamic Programming Genefinding Algorithm"
 HOMEPAGE="http://prodigal.ornl.gov/"
 SRC_URI="https://github.com/hyattpd/${PN^}/archive/v${PV}.tar.gz -> ${P}.tar.gz"
+S="${WORKDIR}/${P^}"
 
 LICENSE="GPL-3"
 SLOT="0"
 KEYWORDS="~amd64"
-IUSE=""
-
-DEPEND=""
-RDEPEND=""
-
-S=${WORKDIR}/${P^}
 
 PATCHES=( "${FILESDIR}"/${PN}-2.6.3-fix-build-system.patch )