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Tue, 1 Mar 2022 12:12:42 +0000 (UTC) Received: from localhost.localdomain (localhost [IPv6:::1]) by oystercatcher.gentoo.org (Postfix) with ESMTP id 154232B0 for ; Tue, 1 Mar 2022 12:12:40 +0000 (UTC) From: "David Seifert" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "David Seifert" Message-ID: <1646136744.68245b30229ce2756c08706b5b075fd0422a40d8.soap@gentoo> Subject: [gentoo-commits] repo/gentoo:master commit in: sci-libs/avogadrolibs/files/, sci-libs/avogadrolibs/ X-VCS-Repository: repo/gentoo X-VCS-Files: sci-libs/avogadrolibs/Manifest sci-libs/avogadrolibs/avogadrolibs-1.95.1.ebuild sci-libs/avogadrolibs/files/avogadrolibs-1.95.1-tests.patch X-VCS-Directories: sci-libs/avogadrolibs/files/ sci-libs/avogadrolibs/ X-VCS-Committer: soap X-VCS-Committer-Name: David Seifert X-VCS-Revision: 68245b30229ce2756c08706b5b075fd0422a40d8 X-VCS-Branch: master Date: Tue, 1 Mar 2022 12:12:40 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Auto-Response-Suppress: DR, RN, NRN, OOF, AutoReply X-Archives-Salt: 667e907d-52ed-4496-8afd-abf5a763d85e X-Archives-Hash: dac1f60bb5ce18f7c10ad9757efcc872 commit: 68245b30229ce2756c08706b5b075fd0422a40d8 Author: David Seifert gentoo org> AuthorDate: Tue Mar 1 12:12:24 2022 +0000 Commit: David Seifert gentoo org> CommitDate: Tue Mar 1 12:12:24 2022 +0000 URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=68245b30 sci-libs/avogadrolibs: add 1.95.1 Bug: https://bugs.gentoo.org/765811 Bug: https://bugs.gentoo.org/834116 Signed-off-by: David Seifert gentoo.org> sci-libs/avogadrolibs/Manifest | 4 + sci-libs/avogadrolibs/avogadrolibs-1.95.1.ebuild | 89 ++++++++++++++++++++++ .../files/avogadrolibs-1.95.1-tests.patch | 13 ++++ 3 files changed, 106 insertions(+) diff --git a/sci-libs/avogadrolibs/Manifest b/sci-libs/avogadrolibs/Manifest index 9de9f0dac5a1..638cbecca2f4 100644 --- a/sci-libs/avogadrolibs/Manifest +++ b/sci-libs/avogadrolibs/Manifest @@ -1,2 +1,6 @@ DIST avogadrolibs-1.93.0.tar.gz 2735862 BLAKE2B b5d696f23aeeab27358ee390a30b2cf146e7119185a0d2e8d71b34d2744e534cd8b50b36d12928b5aa723118db470272b6428514593d64770d172c4bde730cf6 SHA512 1af220e5614cbd96656679c2879cb7f7c46acd135b4e6f2e5f8d0ba98601ce004e78f019a0a71c643f005451309bd194eb73eb9f66707685e5855b47e95f7eae +DIST avogadrolibs-1.95.1.tar.gz 11015910 BLAKE2B 27cb43a22e489c0279e1ed912b1e81f3c850983f367ffb89bef3a63d11204cbf761f2bce6501988ed5ef9b21b44cc5194dad4367da3ae6af65efd0cec5e7d711 SHA512 b4734c732b1686eba74055c4834fef2f9fb66d4a67cd1199c84e81965c3f6e783911e7c7c8d09386c4ff9f1322bab91fe490d3606784ae49acf5531a65a58beb +DIST avogadrolibs-crystals-1.0.1.tar.gz 151829 BLAKE2B 0a1353392a4c087977452f50ffb7db0b2976a2993651b6f7e0df7a9ce6fa8f7960223cac2916dd9f667d37518b85606d73d05e86f7489193a6a609700fc60223 SHA512 c5d6500d8472807b8d2e62888e4a09279c6aeafec81bc4981edaa74e36724b1e7f0381250c79ad297f9f0331bcb5cd8a45fce3f13ad65b9870e901a6424c0650 +DIST avogadrolibs-molecules-1.0.0.tar.gz 206924 BLAKE2B 70eea3d5eb440ab2c7f29c56111f2b8cf780cc84983aa145bc4f2fe144c981978218333ba3c33cf1f620dd3180cca706dfa4e94ffaee6167f89bd3e372172218 SHA512 06891ea7ad3e65c5b0c0ad73ea01916478fcd13fd9ff0d6905d28159678a50371ba9fa2c1f68ef32604dee0c2165de29bd5d50ffbc345bfe752ef0bcb13126f2 DIST linux64-genXrdPattern-avogadrolibs-1.93.0 7480152 BLAKE2B dca8285c41aadfaa20c72f337e0f02db8ee07ce30c11ae84bf3aa7bd0b2220273d33f484d63f761d41a8946c6a0b77a0fb27906c480bcae01ae49b1531ae5cbb SHA512 538bde12e1e52600a21640d5907f43fcc853c6f3c111880f39eb238093e3d1358ccdfa1f45e944ec8b8e5ee3c2dff269cefe5334db5d73300e6ca327c95520b8 +DIST linux64-genXrdPattern-avogadrolibs-1.95.1 7480152 BLAKE2B dca8285c41aadfaa20c72f337e0f02db8ee07ce30c11ae84bf3aa7bd0b2220273d33f484d63f761d41a8946c6a0b77a0fb27906c480bcae01ae49b1531ae5cbb SHA512 538bde12e1e52600a21640d5907f43fcc853c6f3c111880f39eb238093e3d1358ccdfa1f45e944ec8b8e5ee3c2dff269cefe5334db5d73300e6ca327c95520b8 diff --git a/sci-libs/avogadrolibs/avogadrolibs-1.95.1.ebuild b/sci-libs/avogadrolibs/avogadrolibs-1.95.1.ebuild new file mode 100644 index 000000000000..f396fb04e2d9 --- /dev/null +++ b/sci-libs/avogadrolibs/avogadrolibs-1.95.1.ebuild @@ -0,0 +1,89 @@ +# Copyright 1999-2022 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +inherit cmake + +DESCRIPTION="Advanced molecule editor and visualizer 2 - libraries" +HOMEPAGE="https://www.openchemistry.org/ https://github.com/OpenChemistry/avogadrolibs" +SRC_URI=" + https://github.com/OpenChemistry/${PN}/archive/${PV}.tar.gz -> ${P}.tar.gz + https://github.com/OpenChemistry/molecules/archive/refs/tags/1.0.0.tar.gz -> ${PN}-molecules-1.0.0.tar.gz + https://github.com/OpenChemistry/crystals/archive/refs/tags/1.0.1.tar.gz -> ${PN}-crystals-1.0.1.tar.gz + vtk? ( https://github.com/psavery/genXrdPattern/releases/download/1.0-static/linux64-genXrdPattern -> linux64-genXrdPattern-${P} )" + +LICENSE="BSD GPL-2+" +SLOT="0" +KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" +IUSE="archive doc hdf5 qt5 static-plugins test vtk" +RESTRICT="!test? ( test )" +REQUIRED_USE="vtk? ( qt5 )" + +# TODO: Not yet packaged: +# sci-libs/libmsym (https://github.com/mcodev31/libmsym) +RDEPEND=" + >=sci-chemistry/molequeue-0.7 + archive? ( app-arch/libarchive:= ) + hdf5? ( sci-libs/hdf5:= ) + qt5? ( + dev-qt/qtconcurrent:5 + dev-qt/qtcore:5 + dev-qt/qtgui:5 + dev-qt/qtnetwork:5 + dev-qt/qtsvg:5 + dev-qt/qtwidgets:5 + media-libs/glew:0= + virtual/opengl + ) + vtk? ( sci-libs/vtk[qt5,views] )" +DEPEND="${RDEPEND} + dev-cpp/eigen:3 + test? ( dev-cpp/gtest )" +BDEPEND="qt5? ( dev-qt/linguist-tools:5 )" + +PATCHES=( + "${FILESDIR}/"${PN}-1.91.0_pre20180406-bundled-genxrdpattern.patch + "${FILESDIR}/"${PN}-1.95.1-tests.patch +) + +src_unpack() { + default + + if use vtk; then + cp "${DISTDIR}"/linux64-genXrdPattern-${P} "${WORKDIR}/genXrdPattern" || die + fi + + # hardcoded assumptions in + # avogadro/qtplugins/insertfragment/CMakeLists.txt + mv crystals-1.0.1 crystals || die + mv molecules-1.0.0 molecules || die +} + +src_configure() { + local mycmakeargs=( + -DBUILD_GPL_PLUGINS=ON + -DBUILD_STATIC_PLUGINS=$(usex static-plugins) + -DUSE_LIBARCHIVE=$(usex archive) + -DBUILD_DOCUMENTATION=$(usex doc) + -DUSE_HDF5=$(usex hdf5) + -DENABLE_TRANSLATIONS=$(usex qt5) + -DUSE_OPENGL=$(usex qt5) + -DOpenGL_GL_PREFERENCE=GLVND + -DUSE_QT=$(usex qt5) + -DENABLE_TESTING=$(usex test) + -DUSE_VTK=$(usex vtk) + # disabled libraries + -DUSE_PYTHON=OFF + -DUSE_PROTOCALL=OFF + -DUSE_MMTF=OFF + -DUSE_LIBMSYM=OFF + # find_package(Spglib) completely broken + -DUSE_SPGLIB=OFF + ) + use vtk && mycmakeargs+=( + -DBUNDLED_GENXRDPATTERN="${WORKDIR}/genXrdPattern" + ) + + cmake_src_configure +} diff --git a/sci-libs/avogadrolibs/files/avogadrolibs-1.95.1-tests.patch b/sci-libs/avogadrolibs/files/avogadrolibs-1.95.1-tests.patch new file mode 100644 index 000000000000..5feea804632e --- /dev/null +++ b/sci-libs/avogadrolibs/files/avogadrolibs-1.95.1-tests.patch @@ -0,0 +1,13 @@ +exclude test that unconditionally requires sci-libs/spglib +* https://bugs.gentoo.org/765811 + +--- a/tests/core/CMakeLists.txt ++++ b/tests/core/CMakeLists.txt +@@ -15,7 +15,6 @@ + Molecule + Mutex + RingPerceiver +- Spacegroup + Utilities + UnitCell + Variant