[gentoo-commits] proj/sci:master commit in: dev-python/snakemake/

[gentoo-commits] proj/sci:master commit in: dev-python/snakemake/

[Justin Lecher]

commit:     f3549a2aa09ba7a4762309b4c26832f5dbea83b9
Author:     mschubert <mschu.dev <AT> gmail <DOT> com>
AuthorDate: Fri Oct 16 15:53:11 2015 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Fri Oct 16 17:01:23 2015 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=f3549a2a

dev-python/snakemake-3.4.2: new ebuild

 dev-python/snakemake/ChangeLog              |  7 +++++++
 dev-python/snakemake/metadata.xml           | 12 ++++++++++++
 dev-python/snakemake/snakemake-3.4.2.ebuild | 17 +++++++++++++++++
 3 files changed, 36 insertions(+)

diff --git a/dev-python/snakemake/ChangeLog b/dev-python/snakemake/ChangeLog
new file mode 100644
index 0000000..0a30c1d
--- /dev/null
+++ b/dev-python/snakemake/ChangeLog
@@ -0,0 +1,7 @@
+# ChangeLog for dev-python/snakemake
+# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
+# $Id$
+
+  16 Oct 2015; Michael Schubert <mschu.dev@gmail.com> +metadata.xml,
+  +snakemake-3.4.2.ebuild:
+  dev-python/snakemake-3.4.2: new ebuild

diff --git a/dev-python/snakemake/metadata.xml b/dev-python/snakemake/metadata.xml
new file mode 100644
index 0000000..b573d31
--- /dev/null
+++ b/dev-python/snakemake/metadata.xml
@@ -0,0 +1,12 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+  <herd>python</herd>
+  <maintainer>
+    <email>mschu.dev@gmail.com</email>
+    <name>Michael Schubert</name>
+  </maintainer>
+  <upstream>
+    <remote-id type="github">dev-python/snakemake</remote-id>
+  </upstream>
+</pkgmetadata>

diff --git a/dev-python/snakemake/snakemake-3.4.2.ebuild b/dev-python/snakemake/snakemake-3.4.2.ebuild
new file mode 100644
index 0000000..71cd5a2
--- /dev/null
+++ b/dev-python/snakemake/snakemake-3.4.2.ebuild
@@ -0,0 +1,17 @@
+# Copyright 1999-2014 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Id$
+
+EAPI=5
+
+PYTHON_COMPAT=( python{3_3,3_4,3_5} )
+
+inherit distutils-r1
+
+DESCRIPTION="Make-like task language"
+HOMEPAGE="https://bitbucket.org/johanneskoester/snakemake/wiki/Home"
+SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz"
+
+LICENSE="MIT"
+SLOT="0"
+KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"

[gentoo-commits] proj/sci:master commit in: dev-python/snakemake/

[Benda XU]

commit:     216e1730765a7a8c69a47a5175f47d8d75dcc0ff
Author:     Marcin Wozniak <kaczor982 <AT> gmail <DOT> com>
AuthorDate: Tue Dec 31 15:36:06 2019 +0000
Commit:     Benda XU <heroxbd <AT> gentoo <DOT> org>
CommitDate: Sun Jan 26 13:20:38 2020 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=216e1730

dev-python/snakemake: bump to 5.10.0.

  Drop python3_{4,5}, bump to EAPI=7.

Closes: https://github.com/gentoo/sci/pull/935
Closes: https://github.com/gentoo/sci/pull/901
Closes: https://github.com/gentoo/sci/issues/938
Bug: https://bugs.gentoo.org/695742
Signed-off-by: Benda Xu <heroxbd <AT> gentoo.org>

 .../snakemake/{snakemake-3.4.2.ebuild => snakemake-5.10.0.ebuild}     | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/dev-python/snakemake/snakemake-3.4.2.ebuild b/dev-python/snakemake/snakemake-5.10.0.ebuild
similarity index 89%
rename from dev-python/snakemake/snakemake-3.4.2.ebuild
rename to dev-python/snakemake/snakemake-5.10.0.ebuild
index db58e6fed..552b02496 100644
--- a/dev-python/snakemake/snakemake-3.4.2.ebuild
+++ b/dev-python/snakemake/snakemake-5.10.0.ebuild
@@ -1,9 +1,9 @@
 # Copyright 1999-2014 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
 
-EAPI=5
+EAPI=7
 
-PYTHON_COMPAT=( python{3_4,3_5} )
+PYTHON_COMPAT=( python3_6 )
 
 inherit distutils-r1
 

[gentoo-commits] proj/sci:master commit in: dev-python/snakemake/

[Benda XU]

commit:     fa40eeaf466d743e8470fa6ada7436ce5dd44e92
Author:     Benda Xu <heroxbd <AT> gentoo <DOT> org>
AuthorDate: Mon Jan 27 06:23:56 2020 +0000
Commit:     Benda XU <heroxbd <AT> gentoo <DOT> org>
CommitDate: Mon Jan 27 06:23:56 2020 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=fa40eeaf

dev-python/snakemake: again.

Package-Manager: Portage-2.3.79, Repoman-2.3.18
Signed-off-by: Benda Xu <heroxbd <AT> gentoo.org>

 dev-python/snakemake/snakemake-5.10.0.ebuild | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/dev-python/snakemake/snakemake-5.10.0.ebuild b/dev-python/snakemake/snakemake-5.10.0.ebuild
index 1066507d1..03e031837 100644
--- a/dev-python/snakemake/snakemake-5.10.0.ebuild
+++ b/dev-python/snakemake/snakemake-5.10.0.ebuild
@@ -8,7 +8,7 @@ PYTHON_COMPAT=( python3_6 )
 inherit distutils-r1
 
 DESCRIPTION="Make-like task language"
-HOMEPAGE="https://bitbucket.org/johanneskoester/snakemake/wiki"
+HOMEPAGE="https://snakemake.readthedocs.io"
 SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz"
 
 LICENSE="MIT"

[gentoo-commits] proj/sci:master commit in: dev-python/snakemake/

[Benda XU]

commit:     8c30ddaca10c7c0347722e817fa855fa954acb52
Author:     Benda Xu <heroxbd <AT> gentoo <DOT> org>
AuthorDate: Mon Jan 27 06:23:09 2020 +0000
Commit:     Benda XU <heroxbd <AT> gentoo <DOT> org>
CommitDate: Mon Jan 27 06:23:09 2020 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=8c30ddac

dev-python/snakemake: update the HOMEPAGE.

  Fix the ebuild header.

Package-Manager: Portage-2.3.79, Repoman-2.3.18
Signed-off-by: Benda Xu <heroxbd <AT> gentoo.org>

 dev-python/snakemake/snakemake-5.10.0.ebuild | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/dev-python/snakemake/snakemake-5.10.0.ebuild b/dev-python/snakemake/snakemake-5.10.0.ebuild
index 552b02496..1066507d1 100644
--- a/dev-python/snakemake/snakemake-5.10.0.ebuild
+++ b/dev-python/snakemake/snakemake-5.10.0.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2014 Gentoo Foundation
+# Copyright 1999-2020 Gentoo Authors
 # Distributed under the terms of the GNU General Public License v2
 
 EAPI=7
@@ -8,7 +8,7 @@ PYTHON_COMPAT=( python3_6 )
 inherit distutils-r1
 
 DESCRIPTION="Make-like task language"
-HOMEPAGE="https://bitbucket.org/johanneskoester/snakemake/wiki/Home"
+HOMEPAGE="https://bitbucket.org/johanneskoester/snakemake/wiki"
 SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz"
 
 LICENSE="MIT"

[gentoo-commits] proj/sci:master commit in: dev-python/snakemake/

[Aisha Tammy]

commit:     8c5c910f1881b80699c71e5fa46f90c7bb82ede3
Author:     Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
AuthorDate: Wed Dec 30 16:34:00 2020 +0000
Commit:     Aisha Tammy <gentoo <AT> aisha <DOT> cc>
CommitDate: Thu Dec 31 17:22:01 2020 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=8c5c910f

dev-python/snakemake: version bump, EAPI bump, bump py targets

Package-Manager: Portage-3.0.12, Repoman-3.0.2
Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> riseup.net>
Signed-off-by: Aisha Tammy <gentoo <AT> aisha.cc>

 dev-python/snakemake/snakemake-5.10.0.ebuild | 16 --------
 dev-python/snakemake/snakemake-5.31.1.ebuild | 56 ++++++++++++++++++++++++++++
 2 files changed, 56 insertions(+), 16 deletions(-)

diff --git a/dev-python/snakemake/snakemake-5.10.0.ebuild b/dev-python/snakemake/snakemake-5.10.0.ebuild
deleted file mode 100644
index 03e031837..000000000
--- a/dev-python/snakemake/snakemake-5.10.0.ebuild
+++ /dev/null
@@ -1,16 +0,0 @@
-# Copyright 1999-2020 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-PYTHON_COMPAT=( python3_6 )
-
-inherit distutils-r1
-
-DESCRIPTION="Make-like task language"
-HOMEPAGE="https://snakemake.readthedocs.io"
-SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz"
-
-LICENSE="MIT"
-SLOT="0"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"

diff --git a/dev-python/snakemake/snakemake-5.31.1.ebuild b/dev-python/snakemake/snakemake-5.31.1.ebuild
new file mode 100644
index 000000000..6a358a456
--- /dev/null
+++ b/dev-python/snakemake/snakemake-5.31.1.ebuild
@@ -0,0 +1,56 @@
+# Copyright 1999-2020 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+
+PYTHON_COMPAT=( python3_{7,8} )
+DISTUTILS_USE_SETUPTOOLS=rdepend
+
+inherit distutils-r1
+
+DESCRIPTION="Make-like task language"
+HOMEPAGE="https://snakemake.readthedocs.io"
+SRC_URI="https://github.com/${PN}/${PN}/archive/v${PV}.tar.gz -> ${P}.tar.gz"
+
+LICENSE="MIT"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+
+# missing test dep google.cloud
+RESTRICT="test"
+
+BDEPEND="test? (
+	dev-python/requests-mock[${PYTHON_USEDEP}]
+	dev-python/google-api-python-client[${PYTHON_USEDEP}]
+	dev-python/jinja[${PYTHON_USEDEP}]
+	dev-python/networkx[${PYTHON_USEDEP}]
+	dev-python/pygments[${PYTHON_USEDEP}]
+	dev-python/pygraphviz[${PYTHON_USEDEP}]
+	dev-python/oauth2client[${PYTHON_USEDEP}]
+	net-libs/google-cloud-cpp
+)"
+
+RDEPEND="
+	dev-python/wrapt[${PYTHON_USEDEP}]
+	dev-python/requests[${PYTHON_USEDEP}]
+	dev-python/ratelimit[${PYTHON_USEDEP}]
+	dev-python/pyyaml[${PYTHON_USEDEP}]
+	dev-python/configargparse[${PYTHON_USEDEP}]
+	dev-python/appdirs[${PYTHON_USEDEP}]
+	dev-python/datrie[${PYTHON_USEDEP}]
+	dev-python/jsonschema[${PYTHON_USEDEP}]
+	dev-python/docutils[${PYTHON_USEDEP}]
+	dev-python/GitPython[${PYTHON_USEDEP}]
+	dev-python/psutil[${PYTHON_USEDEP}]
+	dev-python/nbformat[${PYTHON_USEDEP}]
+	dev-python/toposort[${PYTHON_USEDEP}]
+	sci-mathematics/pulp[${PYTHON_USEDEP}]
+"
+
+distutils_enable_sphinx docs \
+	dev-python/sphinxcontrib-napoleon \
+	dev-python/sphinx-argparse \
+	dev-python/sphinx_rtd_theme \
+	dev-python/docutils \
+	dev-python/recommonmark
+distutils_enable_tests pytest

[gentoo-commits] proj/sci:master commit in: dev-python/snakemake/

[Andrew Ammerlaan]

commit:     990fd48f1fa182acb02b2a4922b06ab19ea7d01a
Author:     Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
AuthorDate: Fri Feb 12 15:56:39 2021 +0000
Commit:     Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
CommitDate: Fri Feb 12 15:56:59 2021 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=990fd48f

dev-python/snakemake: version bump 5.32.2

old version does not fetch, broken manifest

Closes: https://github.com/gentoo/sci/pull/1052
Package-Manager: Portage-3.0.14, Repoman-3.0.2
Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> riseup.net>

 .../{snakemake-5.31.1.ebuild => snakemake-5.32.2.ebuild} | 16 ++++++++--------
 1 file changed, 8 insertions(+), 8 deletions(-)

diff --git a/dev-python/snakemake/snakemake-5.31.1.ebuild b/dev-python/snakemake/snakemake-5.32.2.ebuild
similarity index 97%
rename from dev-python/snakemake/snakemake-5.31.1.ebuild
rename to dev-python/snakemake/snakemake-5.32.2.ebuild
index 6a358a456..312699378 100644
--- a/dev-python/snakemake/snakemake-5.31.1.ebuild
+++ b/dev-python/snakemake/snakemake-5.32.2.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2020 Gentoo Authors
+# Copyright 1999-2021 Gentoo Authors
 # Distributed under the terms of the GNU General Public License v2
 
 EAPI=7
@@ -31,19 +31,19 @@ BDEPEND="test? (
 )"
 
 RDEPEND="
-	dev-python/wrapt[${PYTHON_USEDEP}]
-	dev-python/requests[${PYTHON_USEDEP}]
-	dev-python/ratelimit[${PYTHON_USEDEP}]
-	dev-python/pyyaml[${PYTHON_USEDEP}]
-	dev-python/configargparse[${PYTHON_USEDEP}]
 	dev-python/appdirs[${PYTHON_USEDEP}]
+	dev-python/configargparse[${PYTHON_USEDEP}]
 	dev-python/datrie[${PYTHON_USEDEP}]
-	dev-python/jsonschema[${PYTHON_USEDEP}]
 	dev-python/docutils[${PYTHON_USEDEP}]
 	dev-python/GitPython[${PYTHON_USEDEP}]
-	dev-python/psutil[${PYTHON_USEDEP}]
+	dev-python/jsonschema[${PYTHON_USEDEP}]
 	dev-python/nbformat[${PYTHON_USEDEP}]
+	dev-python/psutil[${PYTHON_USEDEP}]
+	dev-python/pyyaml[${PYTHON_USEDEP}]
+	dev-python/ratelimit[${PYTHON_USEDEP}]
+	dev-python/requests[${PYTHON_USEDEP}]
 	dev-python/toposort[${PYTHON_USEDEP}]
+	dev-python/wrapt[${PYTHON_USEDEP}]
 	sci-mathematics/pulp[${PYTHON_USEDEP}]
 "
 

[gentoo-commits] proj/sci:master commit in: dev-python/snakemake/

[Andrew Ammerlaan]

commit:     3512e4e0da86828c23d307c88319e0210f51a65f
Author:     Andrew Ammerlaan <andrewammerlaan <AT> gentoo <DOT> org>
AuthorDate: Wed Jan 26 10:24:33 2022 +0000
Commit:     Andrew Ammerlaan <andrewammerlaan <AT> gentoo <DOT> org>
CommitDate: Wed Jan 26 10:24:33 2022 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=3512e4e0

dev-python/snakemake: bump python compat

Package-Manager: Portage-3.0.30, Repoman-3.0.3
Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> gentoo.org>

 dev-python/snakemake/snakemake-5.32.2.ebuild | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/dev-python/snakemake/snakemake-5.32.2.ebuild b/dev-python/snakemake/snakemake-5.32.2.ebuild
index 312699378..53874483f 100644
--- a/dev-python/snakemake/snakemake-5.32.2.ebuild
+++ b/dev-python/snakemake/snakemake-5.32.2.ebuild
@@ -1,9 +1,9 @@
-# Copyright 1999-2021 Gentoo Authors
+# Copyright 1999-2022 Gentoo Authors
 # Distributed under the terms of the GNU General Public License v2
 
 EAPI=7
 
-PYTHON_COMPAT=( python3_{7,8} )
+PYTHON_COMPAT=( python3_{8..9} )
 DISTUTILS_USE_SETUPTOOLS=rdepend
 
 inherit distutils-r1

[gentoo-commits] proj/sci:master commit in: dev-python/snakemake/

[Andrew Ammerlaan]

commit:     6615f9c3c86e9699a54aebb363921a4589df7412
Author:     Andrew Ammerlaan <andrewammerlaan <AT> gentoo <DOT> org>
AuthorDate: Sun Feb 13 16:05:45 2022 +0000
Commit:     Andrew Ammerlaan <andrewammerlaan <AT> gentoo <DOT> org>
CommitDate: Sun Feb 13 16:05:45 2022 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=6615f9c3

dev-python/snakemake: drop python <AT> g.o

Package-Manager: Portage-3.0.30, Repoman-3.0.3
Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> gentoo.org>

 dev-python/snakemake/metadata.xml | 4 ----
 1 file changed, 4 deletions(-)

diff --git a/dev-python/snakemake/metadata.xml b/dev-python/snakemake/metadata.xml
index cff648bf6..440b5758f 100644
--- a/dev-python/snakemake/metadata.xml
+++ b/dev-python/snakemake/metadata.xml
@@ -5,10 +5,6 @@
 		<email>mschu.dev@gmail.com</email>
 		<name>Michael Schubert</name>
 	</maintainer>
-	<maintainer type="project">
-		<email>python@gentoo.org</email>
-		<name>Python</name>
-	</maintainer>
 	<upstream>
 		<remote-id type="bitbucket">johanneskoester/snakemake</remote-id>
 		<remote-id type="pypi">snakemake</remote-id>

[gentoo-commits] proj/sci:master commit in: dev-python/snakemake/

[Andrew Ammerlaan]

commit:     26ac3dfb9d563bba6da49164d094b276762490b6
Author:     Andrew Ammerlaan <andrewammerlaan <AT> gentoo <DOT> org>
AuthorDate: Sun Jul  3 08:30:19 2022 +0000
Commit:     Andrew Ammerlaan <andrewammerlaan <AT> gentoo <DOT> org>
CommitDate: Sun Jul  3 08:30:19 2022 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=26ac3dfb

dev-python/snakemake: configargparse renamed to ConfigArgParse

Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> gentoo.org>

 dev-python/snakemake/snakemake-5.32.2.ebuild | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/dev-python/snakemake/snakemake-5.32.2.ebuild b/dev-python/snakemake/snakemake-5.32.2.ebuild
index 53874483f..59d2f061a 100644
--- a/dev-python/snakemake/snakemake-5.32.2.ebuild
+++ b/dev-python/snakemake/snakemake-5.32.2.ebuild
@@ -32,7 +32,7 @@ BDEPEND="test? (
 
 RDEPEND="
 	dev-python/appdirs[${PYTHON_USEDEP}]
-	dev-python/configargparse[${PYTHON_USEDEP}]
+	dev-python/ConfigArgParse[${PYTHON_USEDEP}]
 	dev-python/datrie[${PYTHON_USEDEP}]
 	dev-python/docutils[${PYTHON_USEDEP}]
 	dev-python/GitPython[${PYTHON_USEDEP}]

[gentoo-commits] proj/sci:master commit in: dev-python/snakemake/

[Andrew Ammerlaan]

commit:     739bbba2330bc2891ca90633e1fc70d56a08eece
Author:     Andrew Ammerlaan <andrewammerlaan <AT> gentoo <DOT> org>
AuthorDate: Fri Mar 17 12:19:12 2023 +0000
Commit:     Andrew Ammerlaan <andrewammerlaan <AT> gentoo <DOT> org>
CommitDate: Fri Mar 17 13:34:46 2023 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=739bbba2

Revert "dev-python/snakemake: treeclean"

This reverts commit f853476e85be13cb1ac9f36e8fbb25ca5e12c464.

Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> gentoo.org>

 dev-python/snakemake/metadata.xml            | 13 +++++++
 dev-python/snakemake/snakemake-5.32.2.ebuild | 56 ++++++++++++++++++++++++++++
 2 files changed, 69 insertions(+)

diff --git a/dev-python/snakemake/metadata.xml b/dev-python/snakemake/metadata.xml
new file mode 100644
index 000000000..d9550c50f
--- /dev/null
+++ b/dev-python/snakemake/metadata.xml
@@ -0,0 +1,13 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+	<maintainer type="person">
+		<email>mschu.dev@gmail.com</email>
+		<name>Michael Schubert</name>
+	</maintainer>
+	<upstream>
+		<remote-id type="bitbucket">johanneskoester/snakemake</remote-id>
+		<remote-id type="pypi">snakemake</remote-id>
+		<remote-id type="github">snakemake/snakemake</remote-id>
+	</upstream>
+</pkgmetadata>

diff --git a/dev-python/snakemake/snakemake-5.32.2.ebuild b/dev-python/snakemake/snakemake-5.32.2.ebuild
new file mode 100644
index 000000000..59d2f061a
--- /dev/null
+++ b/dev-python/snakemake/snakemake-5.32.2.ebuild
@@ -0,0 +1,56 @@
+# Copyright 1999-2022 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+
+PYTHON_COMPAT=( python3_{8..9} )
+DISTUTILS_USE_SETUPTOOLS=rdepend
+
+inherit distutils-r1
+
+DESCRIPTION="Make-like task language"
+HOMEPAGE="https://snakemake.readthedocs.io"
+SRC_URI="https://github.com/${PN}/${PN}/archive/v${PV}.tar.gz -> ${P}.tar.gz"
+
+LICENSE="MIT"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+
+# missing test dep google.cloud
+RESTRICT="test"
+
+BDEPEND="test? (
+	dev-python/requests-mock[${PYTHON_USEDEP}]
+	dev-python/google-api-python-client[${PYTHON_USEDEP}]
+	dev-python/jinja[${PYTHON_USEDEP}]
+	dev-python/networkx[${PYTHON_USEDEP}]
+	dev-python/pygments[${PYTHON_USEDEP}]
+	dev-python/pygraphviz[${PYTHON_USEDEP}]
+	dev-python/oauth2client[${PYTHON_USEDEP}]
+	net-libs/google-cloud-cpp
+)"
+
+RDEPEND="
+	dev-python/appdirs[${PYTHON_USEDEP}]
+	dev-python/ConfigArgParse[${PYTHON_USEDEP}]
+	dev-python/datrie[${PYTHON_USEDEP}]
+	dev-python/docutils[${PYTHON_USEDEP}]
+	dev-python/GitPython[${PYTHON_USEDEP}]
+	dev-python/jsonschema[${PYTHON_USEDEP}]
+	dev-python/nbformat[${PYTHON_USEDEP}]
+	dev-python/psutil[${PYTHON_USEDEP}]
+	dev-python/pyyaml[${PYTHON_USEDEP}]
+	dev-python/ratelimit[${PYTHON_USEDEP}]
+	dev-python/requests[${PYTHON_USEDEP}]
+	dev-python/toposort[${PYTHON_USEDEP}]
+	dev-python/wrapt[${PYTHON_USEDEP}]
+	sci-mathematics/pulp[${PYTHON_USEDEP}]
+"
+
+distutils_enable_sphinx docs \
+	dev-python/sphinxcontrib-napoleon \
+	dev-python/sphinx-argparse \
+	dev-python/sphinx_rtd_theme \
+	dev-python/docutils \
+	dev-python/recommonmark
+distutils_enable_tests pytest

[gentoo-commits] proj/sci:master commit in: dev-python/snakemake/

[Andrew Ammerlaan]

commit:     7b331f81eaab5fcd252a31f65cedf3af2a62e1c3
Author:     Andrew Ammerlaan <andrewammerlaan <AT> gentoo <DOT> org>
AuthorDate: Fri Mar 17 13:33:26 2023 +0000
Commit:     Andrew Ammerlaan <andrewammerlaan <AT> gentoo <DOT> org>
CommitDate: Fri Mar 17 13:35:17 2023 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=7b331f81

dev-python/snakemake: add 7.24.2, drop 5.32.2

Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> gentoo.org>

 ...emake-5.32.2.ebuild => snakemake-7.24.2.ebuild} | 47 +++++++++++++---------
 1 file changed, 28 insertions(+), 19 deletions(-)

diff --git a/dev-python/snakemake/snakemake-5.32.2.ebuild b/dev-python/snakemake/snakemake-7.24.2.ebuild
similarity index 54%
rename from dev-python/snakemake/snakemake-5.32.2.ebuild
rename to dev-python/snakemake/snakemake-7.24.2.ebuild
index 59d2f061a..fb9895514 100644
--- a/dev-python/snakemake/snakemake-5.32.2.ebuild
+++ b/dev-python/snakemake/snakemake-7.24.2.ebuild
@@ -1,47 +1,55 @@
 # Copyright 1999-2022 Gentoo Authors
 # Distributed under the terms of the GNU General Public License v2
 
-EAPI=7
+EAPI=8
 
-PYTHON_COMPAT=( python3_{8..9} )
-DISTUTILS_USE_SETUPTOOLS=rdepend
+PYTHON_COMPAT=( python3_{10..11} )
+DISTUTILS_USE_PEP517=setuptools
 
 inherit distutils-r1
 
 DESCRIPTION="Make-like task language"
 HOMEPAGE="https://snakemake.readthedocs.io"
-SRC_URI="https://github.com/${PN}/${PN}/archive/v${PV}.tar.gz -> ${P}.tar.gz"
+SRC_URI="https://github.com/${PN}/${PN}/archive/v${PV}.tar.gz -> ${P}.gh.tar.gz"
 
 LICENSE="MIT"
 SLOT="0"
-KEYWORDS="~amd64 ~x86"
+KEYWORDS="~amd64"
 
-# missing test dep google.cloud
+# cannot import name '_helpers' from 'google.cloud'
 RESTRICT="test"
 
-BDEPEND="test? (
-	dev-python/requests-mock[${PYTHON_USEDEP}]
-	dev-python/google-api-python-client[${PYTHON_USEDEP}]
-	dev-python/jinja[${PYTHON_USEDEP}]
-	dev-python/networkx[${PYTHON_USEDEP}]
-	dev-python/pygments[${PYTHON_USEDEP}]
-	dev-python/pygraphviz[${PYTHON_USEDEP}]
-	dev-python/oauth2client[${PYTHON_USEDEP}]
-	net-libs/google-cloud-cpp
-)"
+BDEPEND="
+	dev-python/tomli[${PYTHON_USEDEP}]
+	test? (
+		dev-python/requests-mock[${PYTHON_USEDEP}]
+		dev-python/google-api-python-client[${PYTHON_USEDEP}]
+		dev-python/networkx[${PYTHON_USEDEP}]
+		dev-python/pygments[${PYTHON_USEDEP}]
+		dev-python/pygraphviz[${PYTHON_USEDEP}]
+		net-libs/google-cloud-cpp
+	)
+"
 
 RDEPEND="
 	dev-python/appdirs[${PYTHON_USEDEP}]
 	dev-python/ConfigArgParse[${PYTHON_USEDEP}]
+	dev-python/connection_pool[${PYTHON_USEDEP}]
 	dev-python/datrie[${PYTHON_USEDEP}]
 	dev-python/docutils[${PYTHON_USEDEP}]
 	dev-python/GitPython[${PYTHON_USEDEP}]
+	dev-python/humanfriendly[${PYTHON_USEDEP}]
+	dev-python/jinja[${PYTHON_USEDEP}]
 	dev-python/jsonschema[${PYTHON_USEDEP}]
 	dev-python/nbformat[${PYTHON_USEDEP}]
 	dev-python/psutil[${PYTHON_USEDEP}]
 	dev-python/pyyaml[${PYTHON_USEDEP}]
-	dev-python/ratelimit[${PYTHON_USEDEP}]
 	dev-python/requests[${PYTHON_USEDEP}]
+	dev-python/reretry[${PYTHON_USEDEP}]
+	dev-python/smart-open[${PYTHON_USEDEP}]
+	dev-python/stopit[${PYTHON_USEDEP}]
+	dev-python/tabulate[${PYTHON_USEDEP}]
+	dev-python/throttler[${PYTHON_USEDEP}]
 	dev-python/toposort[${PYTHON_USEDEP}]
 	dev-python/wrapt[${PYTHON_USEDEP}]
 	sci-mathematics/pulp[${PYTHON_USEDEP}]
@@ -50,7 +58,8 @@ RDEPEND="
 distutils_enable_sphinx docs \
 	dev-python/sphinxcontrib-napoleon \
 	dev-python/sphinx-argparse \
-	dev-python/sphinx_rtd_theme \
+	dev-python/sphinx-rtd-theme \
 	dev-python/docutils \
-	dev-python/recommonmark
+	dev-python/recommonmark \
+	dev-python/myst-parser
 distutils_enable_tests pytest

[gentoo-commits] proj/sci:master commit in: dev-python/snakemake/

[Andrew Ammerlaan]

commit:     941a0284713a61f2eee8eae0587ba579da503e95
Author:     mschubertv <mschu.dev <AT> gmail <DOT> com>
AuthorDate: Thu Aug 17 08:45:15 2023 +0000
Commit:     Andrew Ammerlaan <andrewammerlaan <AT> gentoo <DOT> org>
CommitDate: Thu Aug 17 12:42:34 2023 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=941a0284

dev-python/snakemake: version bump 7.32.3

Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> gentoo.org>
Closes: https://github.com/gentoo/sci/pull/1208

 dev-python/snakemake/metadata.xml                                    | 5 ++++-
 .../snakemake/{snakemake-7.24.2.ebuild => snakemake-7.32.3.ebuild}   | 1 +
 2 files changed, 5 insertions(+), 1 deletion(-)

diff --git a/dev-python/snakemake/metadata.xml b/dev-python/snakemake/metadata.xml
index d9550c50f..74c76cce1 100644
--- a/dev-python/snakemake/metadata.xml
+++ b/dev-python/snakemake/metadata.xml
@@ -5,8 +5,11 @@
 		<email>mschu.dev@gmail.com</email>
 		<name>Michael Schubert</name>
 	</maintainer>
+	<maintainer type="project">
+		<email>sci@gentoo.org</email>
+		<name>Gentoo Science Project</name>
+	</maintainer>
 	<upstream>
-		<remote-id type="bitbucket">johanneskoester/snakemake</remote-id>
 		<remote-id type="pypi">snakemake</remote-id>
 		<remote-id type="github">snakemake/snakemake</remote-id>
 	</upstream>

diff --git a/dev-python/snakemake/snakemake-7.24.2.ebuild b/dev-python/snakemake/snakemake-7.32.3.ebuild
similarity index 98%
rename from dev-python/snakemake/snakemake-7.24.2.ebuild
rename to dev-python/snakemake/snakemake-7.32.3.ebuild
index fb9895514..94dd9e925 100644
--- a/dev-python/snakemake/snakemake-7.24.2.ebuild
+++ b/dev-python/snakemake/snakemake-7.32.3.ebuild
@@ -52,6 +52,7 @@ RDEPEND="
 	dev-python/throttler[${PYTHON_USEDEP}]
 	dev-python/toposort[${PYTHON_USEDEP}]
 	dev-python/wrapt[${PYTHON_USEDEP}]
+	dev-python/yte[${PYTHON_USEDEP}]
 	sci-mathematics/pulp[${PYTHON_USEDEP}]
 "
 

[gentoo-commits] proj/sci:master commit in: dev-python/snakemake/

[Andrew Ammerlaan]

commit:     3d9beced9a14c8fce6af96e67e7fe864ee2eee1b
Author:     mschubertv <mschu.dev <AT> gmail <DOT> com>
AuthorDate: Mon Dec 18 13:03:35 2023 +0000
Commit:     Andrew Ammerlaan <andrewammerlaan <AT> gentoo <DOT> org>
CommitDate: Mon Dec 18 15:29:30 2023 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=3d9beced

dev-python/snakemake: version bump 7.32.4

Closes: https://github.com/gentoo/sci/pull/1220
Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> gentoo.org>

 .../snakemake/{snakemake-7.32.3.ebuild => snakemake-7.32.4.ebuild}       | 1 +
 1 file changed, 1 insertion(+)

diff --git a/dev-python/snakemake/snakemake-7.32.3.ebuild b/dev-python/snakemake/snakemake-7.32.4.ebuild
similarity index 97%
rename from dev-python/snakemake/snakemake-7.32.3.ebuild
rename to dev-python/snakemake/snakemake-7.32.4.ebuild
index 94dd9e925..711aac286 100644
--- a/dev-python/snakemake/snakemake-7.32.3.ebuild
+++ b/dev-python/snakemake/snakemake-7.32.4.ebuild
@@ -42,6 +42,7 @@ RDEPEND="
 	dev-python/jinja[${PYTHON_USEDEP}]
 	dev-python/jsonschema[${PYTHON_USEDEP}]
 	dev-python/nbformat[${PYTHON_USEDEP}]
+	dev-python/packaging[${PYTHON_USEDEP}]
 	dev-python/psutil[${PYTHON_USEDEP}]
 	dev-python/pyyaml[${PYTHON_USEDEP}]
 	dev-python/requests[${PYTHON_USEDEP}]

[gentoo-commits] proj/sci:master commit in: dev-python/snakemake/

[Andrew Ammerlaan]

commit:     c1fc331978eedc90dc53ce4cd70a106d0526caa8
Author:     Michael Schubert <mschu.dev <AT> gmail <DOT> com>
AuthorDate: Mon Jun 17 21:42:14 2024 +0000
Commit:     Andrew Ammerlaan <andrewammerlaan <AT> gentoo <DOT> org>
CommitDate: Wed Jun 19 10:14:20 2024 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=c1fc3319

dev-python/snakemake: add version 8

Signed-off-by: Michael Schubert <mschu.dev <AT> gmail.com>
Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> gentoo.org>

 dev-python/snakemake/snakemake-8.14.0.ebuild | 74 ++++++++++++++++++++++++++++
 1 file changed, 74 insertions(+)

diff --git a/dev-python/snakemake/snakemake-8.14.0.ebuild b/dev-python/snakemake/snakemake-8.14.0.ebuild
new file mode 100644
index 000000000..1c601d4fa
--- /dev/null
+++ b/dev-python/snakemake/snakemake-8.14.0.ebuild
@@ -0,0 +1,74 @@
+# Copyright 1999-2024 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=8
+
+PYTHON_COMPAT=( python3_{11..12} )
+DISTUTILS_USE_PEP517=setuptools
+
+inherit distutils-r1
+
+DESCRIPTION="Make-like task language"
+HOMEPAGE="https://snakemake.readthedocs.io"
+SRC_URI="https://github.com/${PN}/${PN}/archive/v${PV}.tar.gz -> ${P}.gh.tar.gz"
+
+LICENSE="MIT"
+SLOT="0"
+KEYWORDS="~amd64"
+
+# cannot import name '_helpers' from 'google.cloud'
+RESTRICT="test"
+
+BDEPEND="
+	dev-python/tomli[${PYTHON_USEDEP}]
+	test? (
+		dev-python/requests-mock[${PYTHON_USEDEP}]
+		dev-python/google-api-python-client[${PYTHON_USEDEP}]
+		dev-python/networkx[${PYTHON_USEDEP}]
+		dev-python/pygments[${PYTHON_USEDEP}]
+		dev-python/pygraphviz[${PYTHON_USEDEP}]
+		net-libs/google-cloud-cpp
+	)
+"
+
+RDEPEND="
+	dev-python/appdirs[${PYTHON_USEDEP}]
+	dev-python/immutables[${PYTHON_USEDEP}]
+	dev-python/ConfigArgParse[${PYTHON_USEDEP}]
+	dev-python/connection_pool[${PYTHON_USEDEP}]
+	dev-python/datrie[${PYTHON_USEDEP}]
+	dev-python/docutils[${PYTHON_USEDEP}]
+	dev-python/GitPython[${PYTHON_USEDEP}]
+	dev-python/humanfriendly[${PYTHON_USEDEP}]
+	dev-python/jinja[${PYTHON_USEDEP}]
+	dev-python/jsonschema[${PYTHON_USEDEP}]
+	dev-python/nbformat[${PYTHON_USEDEP}]
+	dev-python/packaging[${PYTHON_USEDEP}]
+	dev-python/psutil[${PYTHON_USEDEP}]
+	dev-python/pyyaml[${PYTHON_USEDEP}]
+	dev-python/requests[${PYTHON_USEDEP}]
+	dev-python/reretry[${PYTHON_USEDEP}]
+	dev-python/smart-open[${PYTHON_USEDEP}]
+	dev-python/snakemake-interface-executor-plugins[${PYTHON_USEDEP}]
+	dev-python/snakemake-interface-common[${PYTHON_USEDEP}]
+	dev-python/snakemake-interface-storage-plugins[${PYTHON_USEDEP}]
+	dev-python/snakemake-interface-report-plugins[${PYTHON_USEDEP}]
+	dev-python/stopit[${PYTHON_USEDEP}]
+	dev-python/tabulate[${PYTHON_USEDEP}]
+	dev-python/throttler[${PYTHON_USEDEP}]
+	dev-python/toposort[${PYTHON_USEDEP}]
+	dev-python/wrapt[${PYTHON_USEDEP}]
+	dev-python/yte[${PYTHON_USEDEP}]
+	dev-python/dpath[${PYTHON_USEDEP}]
+	dev-python/conda-inject[${PYTHON_USEDEP}]
+	sci-mathematics/pulp[${PYTHON_USEDEP}]
+"
+
+distutils_enable_sphinx docs \
+	dev-python/sphinxcontrib-napoleon \
+	dev-python/sphinx-argparse \
+	dev-python/sphinx-rtd-theme \
+	dev-python/docutils \
+	dev-python/recommonmark \
+	dev-python/myst-parser
+distutils_enable_tests pytest

[gentoo-commits] proj/sci:master commit in: dev-python/snakemake/

[Andrew Ammerlaan]

commit:     63b1dce345203efaf4415c609c935abdccc5e1da
Author:     Michael Schubert <mschu.dev <AT> gmail <DOT> com>
AuthorDate: Mon Jun 17 22:00:16 2024 +0000
Commit:     Andrew Ammerlaan <andrewammerlaan <AT> gentoo <DOT> org>
CommitDate: Wed Jun 19 10:40:23 2024 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=63b1dce3

dev-python/snakemake: version 7.32.4 is compat with py3.12

Signed-off-by: Michael Schubert <mschu.dev <AT> gmail.com>
Closes: https://github.com/gentoo/sci/pull/1278
Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> gentoo.org>

 dev-python/snakemake/snakemake-7.32.4.ebuild |  4 ++--
 dev-python/snakemake/snakemake-8.14.0.ebuild | 14 +++++++-------
 2 files changed, 9 insertions(+), 9 deletions(-)

diff --git a/dev-python/snakemake/snakemake-7.32.4.ebuild b/dev-python/snakemake/snakemake-7.32.4.ebuild
index 711aac286..8ff44fdb5 100644
--- a/dev-python/snakemake/snakemake-7.32.4.ebuild
+++ b/dev-python/snakemake/snakemake-7.32.4.ebuild
@@ -3,7 +3,7 @@
 
 EAPI=8
 
-PYTHON_COMPAT=( python3_{10..11} )
+PYTHON_COMPAT=( python3_{10..12} )
 DISTUTILS_USE_PEP517=setuptools
 
 inherit distutils-r1
@@ -54,7 +54,7 @@ RDEPEND="
 	dev-python/toposort[${PYTHON_USEDEP}]
 	dev-python/wrapt[${PYTHON_USEDEP}]
 	dev-python/yte[${PYTHON_USEDEP}]
-	sci-mathematics/pulp[${PYTHON_USEDEP}]
+	<sci-mathematics/pulp-2.8[${PYTHON_USEDEP}]
 "
 
 distutils_enable_sphinx docs \

diff --git a/dev-python/snakemake/snakemake-8.14.0.ebuild b/dev-python/snakemake/snakemake-8.14.0.ebuild
index 1c601d4fa..fed1a1bbb 100644
--- a/dev-python/snakemake/snakemake-8.14.0.ebuild
+++ b/dev-python/snakemake/snakemake-8.14.0.ebuild
@@ -64,11 +64,11 @@ RDEPEND="
 	sci-mathematics/pulp[${PYTHON_USEDEP}]
 "
 
-distutils_enable_sphinx docs \
-	dev-python/sphinxcontrib-napoleon \
-	dev-python/sphinx-argparse \
-	dev-python/sphinx-rtd-theme \
-	dev-python/docutils \
-	dev-python/recommonmark \
-	dev-python/myst-parser
+# distutils_enable_sphinx docs \
+# 	dev-python/sphinxcontrib-napoleon \
+# 	dev-python/sphinx-argparse \
+# 	dev-python/sphinx-rtd-theme \
+# 	dev-python/docutils \
+# 	dev-python/recommonmark \
+# 	dev-python/myst-parser
 distutils_enable_tests pytest

[gentoo-commits] proj/sci:master commit in: dev-python/snakemake/

[Andrew Ammerlaan]

commit:     ce81317b1bfbf175d52799a64be6d1ced42b57cc
Author:     Michael Schubert <mschu.dev <AT> gmail <DOT> com>
AuthorDate: Mon Jul  8 19:50:58 2024 +0000
Commit:     Andrew Ammerlaan <andrewammerlaan <AT> gentoo <DOT> org>
CommitDate: Thu Jul 11 12:51:09 2024 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=ce81317b

dev-python/snakemake: version bump 8.16.0

Signed-off-by: Michael Schubert <mschu.dev <AT> gmail.com>
Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> gentoo.org>

 ...emake-8.14.0.ebuild => snakemake-8.16.0.ebuild} | 26 +++++++++++-----------
 1 file changed, 13 insertions(+), 13 deletions(-)

diff --git a/dev-python/snakemake/snakemake-8.14.0.ebuild b/dev-python/snakemake/snakemake-8.16.0.ebuild
similarity index 70%
rename from dev-python/snakemake/snakemake-8.14.0.ebuild
rename to dev-python/snakemake/snakemake-8.16.0.ebuild
index fed1a1bbb..f83e8feb9 100644
--- a/dev-python/snakemake/snakemake-8.14.0.ebuild
+++ b/dev-python/snakemake/snakemake-8.16.0.ebuild
@@ -35,33 +35,33 @@ RDEPEND="
 	dev-python/appdirs[${PYTHON_USEDEP}]
 	dev-python/immutables[${PYTHON_USEDEP}]
 	dev-python/ConfigArgParse[${PYTHON_USEDEP}]
-	dev-python/connection_pool[${PYTHON_USEDEP}]
+	>=dev-python/connection_pool-0.0.3[${PYTHON_USEDEP}]
 	dev-python/datrie[${PYTHON_USEDEP}]
 	dev-python/docutils[${PYTHON_USEDEP}]
 	dev-python/GitPython[${PYTHON_USEDEP}]
 	dev-python/humanfriendly[${PYTHON_USEDEP}]
-	dev-python/jinja[${PYTHON_USEDEP}]
+	>=dev-python/jinja-3.0[${PYTHON_USEDEP}]
 	dev-python/jsonschema[${PYTHON_USEDEP}]
 	dev-python/nbformat[${PYTHON_USEDEP}]
 	dev-python/packaging[${PYTHON_USEDEP}]
 	dev-python/psutil[${PYTHON_USEDEP}]
 	dev-python/pyyaml[${PYTHON_USEDEP}]
-	dev-python/requests[${PYTHON_USEDEP}]
+	>=dev-python/requests-2.8.1[${PYTHON_USEDEP}]
 	dev-python/reretry[${PYTHON_USEDEP}]
-	dev-python/smart-open[${PYTHON_USEDEP}]
-	dev-python/snakemake-interface-executor-plugins[${PYTHON_USEDEP}]
-	dev-python/snakemake-interface-common[${PYTHON_USEDEP}]
-	dev-python/snakemake-interface-storage-plugins[${PYTHON_USEDEP}]
-	dev-python/snakemake-interface-report-plugins[${PYTHON_USEDEP}]
+	>=dev-python/smart-open-4.0[${PYTHON_USEDEP}]
+	>=dev-python/snakemake-interface-common-1.17.0[${PYTHON_USEDEP}]
+	>=dev-python/snakemake-interface-executor-plugins-9.2.0[${PYTHON_USEDEP}]
+	>=dev-python/snakemake-interface-storage-plugins-3.2.3[${PYTHON_USEDEP}]
+	>=dev-python/snakemake-interface-report-plugins-1.0.0[${PYTHON_USEDEP}]
 	dev-python/stopit[${PYTHON_USEDEP}]
 	dev-python/tabulate[${PYTHON_USEDEP}]
 	dev-python/throttler[${PYTHON_USEDEP}]
-	dev-python/toposort[${PYTHON_USEDEP}]
+	>=dev-python/toposort-1.10[${PYTHON_USEDEP}]
 	dev-python/wrapt[${PYTHON_USEDEP}]
-	dev-python/yte[${PYTHON_USEDEP}]
-	dev-python/dpath[${PYTHON_USEDEP}]
-	dev-python/conda-inject[${PYTHON_USEDEP}]
-	sci-mathematics/pulp[${PYTHON_USEDEP}]
+	>=dev-python/yte-1.5.1[${PYTHON_USEDEP}]
+	>=dev-python/dpath-2.1.6[${PYTHON_USEDEP}]
+	>=dev-python/conda-inject-1.3.1[${PYTHON_USEDEP}]
+	>=sci-mathematics/pulp-2.3.1[${PYTHON_USEDEP}]
 "
 
 # distutils_enable_sphinx docs \