From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by finch.gentoo.org (Postfix) with ESMTPS id E4F90158086 for ; Mon, 11 Oct 2021 14:55:32 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id 138F1E083E; Mon, 11 Oct 2021 14:55:31 +0000 (UTC) Received: from smtp.gentoo.org (woodpecker.gentoo.org [140.211.166.183]) (using TLSv1.2 with cipher ECDHE-RSA-CHACHA20-POLY1305 (256/256 bits)) (No client certificate requested) by pigeon.gentoo.org (Postfix) with ESMTPS id DACF7E083E for ; Mon, 11 Oct 2021 14:55:29 +0000 (UTC) Received: from oystercatcher.gentoo.org (oystercatcher.gentoo.org [148.251.78.52]) (using TLSv1.2 with cipher ECDHE-RSA-CHACHA20-POLY1305 (256/256 bits)) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id B159434350D for ; Mon, 11 Oct 2021 14:55:27 +0000 (UTC) Received: from localhost.localdomain (localhost [IPv6:::1]) by oystercatcher.gentoo.org (Postfix) with ESMTP id 34B6B14C for ; Mon, 11 Oct 2021 14:55:25 +0000 (UTC) From: "David Seifert" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "David Seifert" Message-ID: <1633964111.fac85a0681906115f21e878305e44c0243e0c686.soap@gentoo> Subject: [gentoo-commits] repo/gentoo:master commit in: sci-libs/htslib/ X-VCS-Repository: repo/gentoo X-VCS-Files: sci-libs/htslib/Manifest sci-libs/htslib/htslib-1.10.2.ebuild X-VCS-Directories: sci-libs/htslib/ X-VCS-Committer: soap X-VCS-Committer-Name: David Seifert X-VCS-Revision: fac85a0681906115f21e878305e44c0243e0c686 X-VCS-Branch: master Date: Mon, 11 Oct 2021 14:55:25 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Auto-Response-Suppress: DR, RN, NRN, OOF, AutoReply X-Archives-Salt: f1cb9c8b-6354-455a-a601-717db9056f1a X-Archives-Hash: 5d39e3c0872c9ce580035e92327b6ba3 commit: fac85a0681906115f21e878305e44c0243e0c686 Author: David Seifert gentoo org> AuthorDate: Mon Oct 11 14:55:11 2021 +0000 Commit: David Seifert gentoo org> CommitDate: Mon Oct 11 14:55:11 2021 +0000 URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=fac85a06 sci-libs/htslib: drop 1.10.2 Bug: https://bugs.gentoo.org/799788 Signed-off-by: David Seifert gentoo.org> Closes: https://github.com/gentoo/gentoo/pull/22556 Signed-off-by: David Seifert gentoo.org> sci-libs/htslib/Manifest | 1 - sci-libs/htslib/htslib-1.10.2.ebuild | 51 ------------------------------------ 2 files changed, 52 deletions(-) diff --git a/sci-libs/htslib/Manifest b/sci-libs/htslib/Manifest index 9e65f247fdf..230f4325182 100644 --- a/sci-libs/htslib/Manifest +++ b/sci-libs/htslib/Manifest @@ -1,2 +1 @@ -DIST htslib-1.10.2.tar.bz2 1306320 BLAKE2B f877bd9c160921f498f4160f687094a1a369732bc9f61cd94a3c9ca311fa9f865505a205e38e0d348a1010b627f1ef07b590cd7e69c945df1d804133b17b2fd1 SHA512 3ecb83b0abccf731cd42b889e352e10dd922524f6e78bcafb04f8c6c71457b0dc1f5f22690b36f03cce7d97a6a905db286243ef4858138068dcac368e4ae1075 DIST htslib-1.13.tar.bz2 4226834 BLAKE2B ae1f64e564f0f7bea80ea9d276b5d5b2b04fa3c8bd58f2c68966225b4324962f34d8a26b74267ab90dc530dfced1b9c01702d25918fd7a7c74e13913f00d5007 SHA512 16a3d61c115b71406bc4411a0c1176909166b52c4f7bb11614e398df4defaec4d09763413053e4d0d5916921c866d20019096d8fed866e77f9f1cafbd1e95b16 diff --git a/sci-libs/htslib/htslib-1.10.2.ebuild b/sci-libs/htslib/htslib-1.10.2.ebuild deleted file mode 100644 index 67a341be70e..00000000000 --- a/sci-libs/htslib/htslib-1.10.2.ebuild +++ /dev/null @@ -1,51 +0,0 @@ -# Copyright 1999-2020 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=7 - -inherit toolchain-funcs - -DESCRIPTION="C library for high-throughput sequencing data formats" -HOMEPAGE="http://www.htslib.org/" -SRC_URI="mirror://sourceforge/samtools/${PV}/${P}.tar.bz2" - -LICENSE="MIT" -SLOT="0/3" -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" -IUSE="+bzip2 curl +lzma" - -RDEPEND=" - bzip2? ( app-arch/bzip2:= ) - curl? ( net-misc/curl ) - lzma? ( app-arch/xz-utils:= )" -DEPEND="${RDEPEND}" - -src_prepare() { - default - - # upstream injects LDFLAGS into the .pc file, - # which is a big nono for QA - sed -e '/^\(static_l\|Libs.private\|Requires.private\)/d' \ - -i htslib.pc.in || die -} - -src_configure() { - econf \ - --disable-gcs \ - --disable-plugins \ - --disable-s3 \ - $(use_enable bzip2 bz2) \ - $(use_enable curl libcurl) \ - $(use_enable lzma) -} - -src_compile() { - emake AR="$(tc-getAR)" -} - -src_install() { - default - - # doesn't use libtool, can't disable static libraries - find "${ED}" -name '*.a' -delete || die -}