From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by finch.gentoo.org (Postfix) with ESMTPS id 9050D1580B2 for ; Thu, 2 Sep 2021 12:01:04 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id 859DFE0BA3; Thu, 2 Sep 2021 12:01:03 +0000 (UTC) Received: from smtp.gentoo.org (woodpecker.gentoo.org [140.211.166.183]) (using TLSv1.2 with cipher ECDHE-RSA-AES128-GCM-SHA256 (128/128 bits)) (No client certificate requested) by pigeon.gentoo.org (Postfix) with ESMTPS id 6589BE0BA3 for ; Thu, 2 Sep 2021 12:01:03 +0000 (UTC) Received: from oystercatcher.gentoo.org (unknown [IPv6:2a01:4f8:202:4333:225:90ff:fed9:fc84]) (using TLSv1.2 with cipher ECDHE-RSA-AES128-GCM-SHA256 (128/128 bits)) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id EB8A933BF1F for ; Thu, 2 Sep 2021 12:01:01 +0000 (UTC) Received: from localhost.localdomain (localhost [IPv6:::1]) by oystercatcher.gentoo.org (Postfix) with ESMTP id 7DE589E for ; Thu, 2 Sep 2021 12:01:00 +0000 (UTC) From: "Pacho Ramos" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Pacho Ramos" Message-ID: <1630584042.73c30608dfed594378b78b10858023a7f0a19686.pacho@gentoo> Subject: [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/dssp/ X-VCS-Repository: repo/gentoo X-VCS-Files: sci-chemistry/dssp/Manifest sci-chemistry/dssp/dssp-4.0.1_p20210831.ebuild X-VCS-Directories: sci-chemistry/dssp/ X-VCS-Committer: pacho X-VCS-Committer-Name: Pacho Ramos X-VCS-Revision: 73c30608dfed594378b78b10858023a7f0a19686 X-VCS-Branch: master Date: Thu, 2 Sep 2021 12:01:00 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Auto-Response-Suppress: DR, RN, NRN, OOF, AutoReply X-Archives-Salt: dd12d597-51fc-45e7-8980-d0174cdb0c51 X-Archives-Hash: 6b97f0f3d885c6e03bf8f6feccc9b5b9 commit: 73c30608dfed594378b78b10858023a7f0a19686 Author: Pacho Ramos gentoo org> AuthorDate: Thu Sep 2 11:44:31 2021 +0000 Commit: Pacho Ramos gentoo org> CommitDate: Thu Sep 2 12:00:42 2021 +0000 URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=73c30608 sci-chemistry/dssp: Bump to 4.0.1 Closes: https://bugs.gentoo.org/679142 Closes: https://bugs.gentoo.org/802417 Closes: https://bugs.gentoo.org/808669 Package-Manager: Portage-3.0.22, Repoman-3.0.3 Signed-off-by: Pacho Ramos gentoo.org> sci-chemistry/dssp/Manifest | 1 + sci-chemistry/dssp/dssp-4.0.1_p20210831.ebuild | 33 ++++++++++++++++++++++++++ 2 files changed, 34 insertions(+) diff --git a/sci-chemistry/dssp/Manifest b/sci-chemistry/dssp/Manifest index ada8aac8e5c..170fb6728d5 100644 --- a/sci-chemistry/dssp/Manifest +++ b/sci-chemistry/dssp/Manifest @@ -1 +1,2 @@ DIST dssp-2.2.1.tgz 47141 BLAKE2B 34d8b2db8797a8c23763766c0214337f03584c4be52c1bc820a0df0db6a5f78ac0229aafdd47a60b8fd6f4832abf0399663c53f9e898c75f08ecbe22b141c8da SHA512 4a273714d6b3230daea166caa7f4117d5ccb225bea0cf1bc2eb61539b6cc8e227d0ba19047d61f0ad0d1d6bc2efdec9c193bd44341e15ef0950acb4a22498811 +DIST dssp-4.0.1_p20210831.tar.gz 121793 BLAKE2B 1e028b086b418772a93db350f8084d1786996ff6ea935d236b1431d8f4a07c0b33ebf374a4c4d5d4d243952f3f56e29a548ce09763863a1e0c529755fba6c211 SHA512 62f1ac781dd3d6f3436e6c155ae1a470d0baf6a6d9f6d6729034a7a5ef41550f76d0473c688d235279336306c9f3598377c056cddd6d00a89a826fbb04c1bfb3 diff --git a/sci-chemistry/dssp/dssp-4.0.1_p20210831.ebuild b/sci-chemistry/dssp/dssp-4.0.1_p20210831.ebuild new file mode 100644 index 00000000000..407efe50622 --- /dev/null +++ b/sci-chemistry/dssp/dssp-4.0.1_p20210831.ebuild @@ -0,0 +1,33 @@ +# Copyright 1999-2021 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=7 +inherit cmake + +DESCRIPTION="The protein secondary structure standard" +HOMEPAGE="https://swift.cmbi.umcn.nl/gv/dssp/ https://github.com/PDB-REDO/dssp" + +COMMIT="728cc7c6c8d95460d8db453cf7adb25a89ba15f6" +SRC_URI="https://github.com/PDB-REDO/${PN}/archive/${COMMIT}.tar.gz -> ${P}.tar.gz" +S="${WORKDIR}/${PN}-${COMMIT}" + +LICENSE="BSD-2" +SLOT="0" +KEYWORDS="~amd64" +IUSE="" + +BDEPEND=" + >=dev-libs/boost-1.70.0:=[threads(+)] + >=sci-libs/libcifpp-1.1.1 +" +DEPEND="" +RDEPEND="${BDEPEND}" + +pkg_postinst() { + if has_version sci-chemistry/gromacs; then + ewarn "DSSP > 3.0.x is not compatible with gmx do_dssp:" + ewarn "https://gitlab.com/gromacs/gromacs/-/issues/4129" + ewarn + ewarn "Feel free to mask newer versions if needed." + fi +}