[gentoo-commits] repo/gentoo:master commit in: sci-mathematics/gfan/

[gentoo-commits] repo/gentoo:master commit in: sci-mathematics/gfan/

[Markus Meier]

commit:     3d3f00e1e7338bfc45474e1bb7465855be966453
Author:     Markus Meier <maekke <AT> gentoo <DOT> org>
AuthorDate: Wed Mar  2 19:31:19 2016 +0000
Commit:     Markus Meier <maekke <AT> gentoo <DOT> org>
CommitDate: Wed Mar  2 19:31:19 2016 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=3d3f00e1

sci-mathematics/gfan: add ~arm, bug #573324

Package-Manager: portage-2.2.27
RepoMan-Options: --include-arches="arm"

 sci-mathematics/gfan/gfan-0.5.ebuild | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/sci-mathematics/gfan/gfan-0.5.ebuild b/sci-mathematics/gfan/gfan-0.5.ebuild
index e08db31..09a3bb6 100644
--- a/sci-mathematics/gfan/gfan-0.5.ebuild
+++ b/sci-mathematics/gfan/gfan-0.5.ebuild
@@ -12,7 +12,7 @@ SRC_URI="http://www.math.tu-berlin.de/~jensen/software/gfan/${PN}${PV}.tar.gz"
 
 LICENSE="GPL-2"
 SLOT="0"
-KEYWORDS="amd64 x86 ~amd64-linux ~x86-linux"
+KEYWORDS="amd64 ~arm x86 ~amd64-linux ~x86-linux"
 IUSE=""
 
 DEPEND="dev-libs/gmp[cxx]

[gentoo-commits] repo/gentoo:master commit in: sci-mathematics/gfan/

[David Seifert]

commit:     1ca8e75dcebdd834afafeed056becd09a49b4ef2
Author:     Gerhard Bräunlich <wippbox <AT> gmx <DOT> net>
AuthorDate: Sun Feb 19 10:55:31 2017 +0000
Commit:     David Seifert <soap <AT> gentoo <DOT> org>
CommitDate: Sun Feb 19 18:35:56 2017 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=1ca8e75d

sci-mathematics/gfan: Remove EAPI 3 ebuild

Package-Manager: portage-2.3.3
Closes: https://github.com/gentoo/gentoo/pull/4031

 sci-mathematics/gfan/gfan-0.5.ebuild | 34 ----------------------------------
 1 file changed, 34 deletions(-)

diff --git a/sci-mathematics/gfan/gfan-0.5.ebuild b/sci-mathematics/gfan/gfan-0.5.ebuild
deleted file mode 100644
index 09a3bb6898..0000000000
--- a/sci-mathematics/gfan/gfan-0.5.ebuild
+++ /dev/null
@@ -1,34 +0,0 @@
-# Copyright 1999-2012 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Id$
-
-EAPI="3"
-
-inherit eutils toolchain-funcs
-
-DESCRIPTION="computes Groebner fans and tropical varities"
-HOMEPAGE="http://www.math.tu-berlin.de/~jensen/software/gfan/gfan.html"
-SRC_URI="http://www.math.tu-berlin.de/~jensen/software/gfan/${PN}${PV}.tar.gz"
-
-LICENSE="GPL-2"
-SLOT="0"
-KEYWORDS="amd64 ~arm x86 ~amd64-linux ~x86-linux"
-IUSE=""
-
-DEPEND="dev-libs/gmp[cxx]
-	sci-libs/cddlib"
-RDEPEND="${DEPEND}"
-
-S="${WORKDIR}/${PN}${PV}/"
-
-src_prepare () {
-	epatch "${FILESDIR}/${P}-double-declare-fix.patch"
-	sed -i -e "s/-O2/${CXXFLAGS}/" \
-		-e "/GPROFFLAG =/d" \
-		-e "s/g++/$(tc-getCXX)/" \
-		-e "s/\$(CCLINKER)/& \$(LDFLAGS)/" Makefile || die
-}
-
-src_install() {
-	emake PREFIX="${ED}/usr" install || die "emake install failed"
-}

[gentoo-commits] repo/gentoo:master commit in: sci-mathematics/gfan/

[Michael Orlitzky]

commit:     f2f461b73ee564076c4c71d16754364677de0e55
Author:     Michael Orlitzky <mjo <AT> gentoo <DOT> org>
AuthorDate: Fri Mar  6 16:56:00 2020 +0000
Commit:     Michael Orlitzky <mjo <AT> gentoo <DOT> org>
CommitDate: Fri Mar  6 16:56:00 2020 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=f2f461b7

sci-mathematics/gfan: improve the long description in metadata.xml.

Package-Manager: Portage-2.3.84, Repoman-2.3.20
Signed-off-by: Michael Orlitzky <mjo <AT> gentoo.org>

 sci-mathematics/gfan/metadata.xml | 17 ++++++++++++++++-
 1 file changed, 16 insertions(+), 1 deletion(-)

diff --git a/sci-mathematics/gfan/metadata.xml b/sci-mathematics/gfan/metadata.xml
index abc08ece608..c9e1ddd54b3 100644
--- a/sci-mathematics/gfan/metadata.xml
+++ b/sci-mathematics/gfan/metadata.xml
@@ -6,6 +6,21 @@
   <name>Gentoo Mathematics Project</name>
  </maintainer>
 <longdescription lang="en">
-  gfan is a computer algebra tool to compute Groebner fans and tropical varieties.
+  Gfan is a software package for computing Gröbner fans and tropical
+  varieties. These are polyhedral fans associated to polynomial
+  ideals. The maximal cones of a Gröbner fan are in bijection with the
+  marked reduced Gröbner bases of its defining ideal. The software
+  computes all marked reduced Gröbner bases of an ideal. Their union
+  is a universal Gröbner basis. The tropical variety of a polynomial
+  ideal is a certain subcomplex of the Gröbner fan. Gfan contains
+  algorithms for computing this complex for general ideals and
+  specialized algorithms for tropical curves, tropical hypersurfaces
+  and tropical varieties of prime ideals. In addition to the above
+  core functions the package contains many tools which are useful in
+  the study of Gröbner bases, initial ideals and tropical
+  geometry. The full list of commands can be found in Appendix B of
+  the manual. For ordinary Gröbner basis computations Gfan is not
+  competitive in speed compared to programs such as CoCoA, Singular
+  and Macaulay2.
 </longdescription>
 </pkgmetadata>

[gentoo-commits] repo/gentoo:master commit in: sci-mathematics/gfan/

[Agostino Sarubbo]

commit:     4f3190c04f1858baab309e67ba76bf0ea00beedf
Author:     Agostino Sarubbo <ago <AT> gentoo <DOT> org>
AuthorDate: Tue Apr  7 10:32:06 2020 +0000
Commit:     Agostino Sarubbo <ago <AT> gentoo <DOT> org>
CommitDate: Tue Apr  7 10:32:06 2020 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=4f3190c0

sci-mathematics/gfan: amd64 stable wrt bug #716362

Package-Manager: Portage-2.3.89, Repoman-2.3.20
RepoMan-Options: --include-arches="amd64"
Signed-off-by: Agostino Sarubbo <ago <AT> gentoo.org>

 sci-mathematics/gfan/gfan-0.6.2.ebuild | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/sci-mathematics/gfan/gfan-0.6.2.ebuild b/sci-mathematics/gfan/gfan-0.6.2.ebuild
index 07d32ab4907..a75c9f76f0f 100644
--- a/sci-mathematics/gfan/gfan-0.6.2.ebuild
+++ b/sci-mathematics/gfan/gfan-0.6.2.ebuild
@@ -11,7 +11,7 @@ SRC_URI="https://users-math.au.dk/~jensen/software/${PN}/${PN}${PV}.tar.gz"
 
 LICENSE="GPL-2+"
 SLOT="0"
-KEYWORDS="~amd64 ~arm ~x86 ~amd64-linux ~x86-linux"
+KEYWORDS="amd64 ~arm ~x86 ~amd64-linux ~x86-linux"
 IUSE="doc"
 
 BDEPEND="doc? ( virtual/latex-base )"

[gentoo-commits] repo/gentoo:master commit in: sci-mathematics/gfan/

[Agostino Sarubbo]

commit:     c85d8e6935e40e6a332289eb0dd6b5e9afb5c759
Author:     Agostino Sarubbo <ago <AT> gentoo <DOT> org>
AuthorDate: Mon Apr 13 10:20:15 2020 +0000
Commit:     Agostino Sarubbo <ago <AT> gentoo <DOT> org>
CommitDate: Mon Apr 13 10:20:15 2020 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=c85d8e69

sci-mathematics/gfan: x86 stable wrt bug #716362

Package-Manager: Portage-2.3.89, Repoman-2.3.20
RepoMan-Options: --include-arches="x86"
Signed-off-by: Agostino Sarubbo <ago <AT> gentoo.org>

 sci-mathematics/gfan/gfan-0.6.2.ebuild | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/sci-mathematics/gfan/gfan-0.6.2.ebuild b/sci-mathematics/gfan/gfan-0.6.2.ebuild
index a75c9f76f0f..eac7123f262 100644
--- a/sci-mathematics/gfan/gfan-0.6.2.ebuild
+++ b/sci-mathematics/gfan/gfan-0.6.2.ebuild
@@ -11,7 +11,7 @@ SRC_URI="https://users-math.au.dk/~jensen/software/${PN}/${PN}${PV}.tar.gz"
 
 LICENSE="GPL-2+"
 SLOT="0"
-KEYWORDS="amd64 ~arm ~x86 ~amd64-linux ~x86-linux"
+KEYWORDS="amd64 ~arm x86 ~amd64-linux ~x86-linux"
 IUSE="doc"
 
 BDEPEND="doc? ( virtual/latex-base )"

[gentoo-commits] repo/gentoo:master commit in: sci-mathematics/gfan/

[Michael Orlitzky]

commit:     ee4164ea823436d8d4ba9f9f3ee0ca517de4141e
Author:     Michael Orlitzky <mjo <AT> gentoo <DOT> org>
AuthorDate: Wed Apr 15 13:34:01 2020 +0000
Commit:     Michael Orlitzky <mjo <AT> gentoo <DOT> org>
CommitDate: Wed Apr 15 13:49:45 2020 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=ee4164ea

sci-mathematics/gfan: disable test that hangs on x86.

The "0602ResultantFanProjection" test hangs on x86, leading to a build
failure. Disabling this test looks as simple as deleting it from the
source tree, which the ebuild now does in src_prepare().

Bug: https://bugs.gentoo.org/717112
Package-Manager: Portage-2.3.89, Repoman-2.3.20
Signed-off-by: Michael Orlitzky <mjo <AT> gentoo.org>

 sci-mathematics/gfan/gfan-0.6.2.ebuild | 11 +++++++++++
 1 file changed, 11 insertions(+)

diff --git a/sci-mathematics/gfan/gfan-0.6.2.ebuild b/sci-mathematics/gfan/gfan-0.6.2.ebuild
index eac7123f262..44e05155003 100644
--- a/sci-mathematics/gfan/gfan-0.6.2.ebuild
+++ b/sci-mathematics/gfan/gfan-0.6.2.ebuild
@@ -29,9 +29,20 @@ PATCHES=(
 
 pkg_setup() {
 	tc-export CC CXX
+
+	# This should really go in cppflags, but that doesn't work with
+	# gfan's hand-written Makefile.
 	append-cxxflags -DNOCDDPREFIX
 }
 
+src_prepare() {
+	default
+
+	# This test hangs on x86, bug 717112.
+	rm -r testsuite/0602ResultantFanProjection || \
+		die "unable to disable test 0602ResultantFanProjection"
+}
+
 src_configure() {
 	# The upstream Makefile says that GCC produces bad code with -O3.
 	replace-flags "-O3" "-O2"

[gentoo-commits] repo/gentoo:master commit in: sci-mathematics/gfan/

[Michael Orlitzky]

commit:     9a29bad46e9208e1ad584d66e27ae2bfafe2f7f2
Author:     François Bissey <frp.bissey <AT> gmail <DOT> com>
AuthorDate: Fri Feb 26 01:13:26 2021 +0000
Commit:     Michael Orlitzky <mjo <AT> gentoo <DOT> org>
CommitDate: Wed Mar  3 02:46:15 2021 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=9a29bad4

sci-mathematics/gfan: adapt to newer cddlib

Package-Manager: Portage-3.0.13, Repoman-3.0.2
Closes: https://github.com/gentoo/gentoo/pull/19661
Bug: https://bugs.gentoo.org/show_bug.cgi?id=762817
Signed-off-by: François René Pierre Bissey <frp.bissey <AT> gmail.com>
Signed-off-by: Michael Orlitzky <mjo <AT> gentoo.org>

 sci-mathematics/gfan/gfan-0.6.2-r1.ebuild | 67 +++++++++++++++++++++++++++++++
 1 file changed, 67 insertions(+)

diff --git a/sci-mathematics/gfan/gfan-0.6.2-r1.ebuild b/sci-mathematics/gfan/gfan-0.6.2-r1.ebuild
new file mode 100644
index 00000000000..01434747eed
--- /dev/null
+++ b/sci-mathematics/gfan/gfan-0.6.2-r1.ebuild
@@ -0,0 +1,67 @@
+# Copyright 1999-2021 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+
+inherit flag-o-matic toolchain-funcs
+
+DESCRIPTION="Compute Groebner fans and tropical varieties"
+HOMEPAGE="https://users-math.au.dk/~jensen/software/gfan/gfan.html"
+SRC_URI="https://users-math.au.dk/~jensen/software/${PN}/${PN}${PV}.tar.gz"
+
+LICENSE="GPL-2+"
+SLOT="0"
+KEYWORDS="~amd64 ~arm ~x86 ~amd64-linux ~x86-linux"
+IUSE="doc"
+
+BDEPEND="doc? ( virtual/latex-base )"
+DEPEND="dev-libs/gmp:0=[cxx]
+	sci-libs/cddlib:0="
+RDEPEND="${DEPEND}"
+
+S="${WORKDIR}/${PN}${PV}"
+
+PATCHES=(
+	"${FILESDIR}/${PN}-0.6.2-xcode9.3_compat.patch"
+	"${FILESDIR}/${PN}-0.6.2-testsuite.patch"
+	"${FILESDIR}/${PN}-0.6.2-Makefile.patch"
+	)
+
+pkg_setup() {
+	tc-export CC CXX
+
+	# This should really go in cppflags, but that doesn't work with
+	# gfan's hand-written Makefile.
+	append-cxxflags -DNOCDDPREFIX -I"${EPREFIX}"/usr/include/cddlib
+}
+
+src_prepare() {
+	default
+
+	# This test hangs on x86, bug 717112.
+	rm -r testsuite/0602ResultantFanProjection || \
+		die "unable to disable test 0602ResultantFanProjection"
+}
+
+src_configure() {
+	# The upstream Makefile says that GCC produces bad code with -O3.
+	replace-flags "-O3" "-O2"
+	default
+}
+
+src_compile() {
+	default
+	if use doc; then
+		pushd doc > /dev/null || die
+		# The LaTeX build commands need to be repeated until the
+		# document "stops changing," which is not as easy as it
+		# sounds to detect. Running it twice seems to work here.
+		pdflatex manual.tex && bibtex manual && pdflatex manual.tex || die
+		popd > /dev/null || die
+	fi
+}
+
+src_install() {
+	emake PREFIX="${ED}/usr" install
+	use doc && dodoc doc/manual.pdf
+}

[gentoo-commits] repo/gentoo:master commit in: sci-mathematics/gfan/

[Sam James]

commit:     2fa043b4ebb8e590ce254ce84f5108c20b8e0698
Author:     Sam James <sam <AT> gentoo <DOT> org>
AuthorDate: Sat May 29 15:19:55 2021 +0000
Commit:     Sam James <sam <AT> gentoo <DOT> org>
CommitDate: Sat May 29 15:19:55 2021 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=2fa043b4

sci-mathematics/gfan: Stabilize 0.6.2-r1 amd64, #762817

Signed-off-by: Sam James <sam <AT> gentoo.org>

 sci-mathematics/gfan/gfan-0.6.2-r1.ebuild | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/sci-mathematics/gfan/gfan-0.6.2-r1.ebuild b/sci-mathematics/gfan/gfan-0.6.2-r1.ebuild
index 01434747eed..185e558ce12 100644
--- a/sci-mathematics/gfan/gfan-0.6.2-r1.ebuild
+++ b/sci-mathematics/gfan/gfan-0.6.2-r1.ebuild
@@ -11,7 +11,7 @@ SRC_URI="https://users-math.au.dk/~jensen/software/${PN}/${PN}${PV}.tar.gz"
 
 LICENSE="GPL-2+"
 SLOT="0"
-KEYWORDS="~amd64 ~arm ~x86 ~amd64-linux ~x86-linux"
+KEYWORDS="amd64 ~arm ~x86 ~amd64-linux ~x86-linux"
 IUSE="doc"
 
 BDEPEND="doc? ( virtual/latex-base )"

[gentoo-commits] repo/gentoo:master commit in: sci-mathematics/gfan/

[David Seifert]

commit:     679d6d8c8e2f7a665ec20330852f6a1b4cf2dd56
Author:     David Seifert <soap <AT> gentoo <DOT> org>
AuthorDate: Fri Jun 18 13:15:33 2021 +0000
Commit:     David Seifert <soap <AT> gentoo <DOT> org>
CommitDate: Fri Jun 18 13:15:33 2021 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=679d6d8c

sci-mathematics/gfan: Depend on dev-libs/gmp[cxx(+)]

Package-Manager: Portage-3.0.20, Repoman-3.0.3
Signed-off-by: David Seifert <soap <AT> gentoo.org>

 sci-mathematics/gfan/{gfan-0.6.2.ebuild => gfan-0.6.2-r2.ebuild}    | 4 ++--
 sci-mathematics/gfan/{gfan-0.6.2-r1.ebuild => gfan-0.6.2-r3.ebuild} | 2 +-
 2 files changed, 3 insertions(+), 3 deletions(-)

diff --git a/sci-mathematics/gfan/gfan-0.6.2.ebuild b/sci-mathematics/gfan/gfan-0.6.2-r2.ebuild
similarity index 95%
rename from sci-mathematics/gfan/gfan-0.6.2.ebuild
rename to sci-mathematics/gfan/gfan-0.6.2-r2.ebuild
index 44e05155003..24132c367b9 100644
--- a/sci-mathematics/gfan/gfan-0.6.2.ebuild
+++ b/sci-mathematics/gfan/gfan-0.6.2-r2.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2020 Gentoo Authors
+# Copyright 1999-2021 Gentoo Authors
 # Distributed under the terms of the GNU General Public License v2
 
 EAPI=7
@@ -15,7 +15,7 @@ KEYWORDS="amd64 ~arm x86 ~amd64-linux ~x86-linux"
 IUSE="doc"
 
 BDEPEND="doc? ( virtual/latex-base )"
-DEPEND="dev-libs/gmp:0=[cxx]
+DEPEND="dev-libs/gmp:0=[cxx(+)]
 	sci-libs/cddlib:0="
 RDEPEND="${DEPEND}"
 

diff --git a/sci-mathematics/gfan/gfan-0.6.2-r1.ebuild b/sci-mathematics/gfan/gfan-0.6.2-r3.ebuild
similarity index 98%
rename from sci-mathematics/gfan/gfan-0.6.2-r1.ebuild
rename to sci-mathematics/gfan/gfan-0.6.2-r3.ebuild
index 185e558ce12..00132defd82 100644
--- a/sci-mathematics/gfan/gfan-0.6.2-r1.ebuild
+++ b/sci-mathematics/gfan/gfan-0.6.2-r3.ebuild
@@ -15,7 +15,7 @@ KEYWORDS="amd64 ~arm ~x86 ~amd64-linux ~x86-linux"
 IUSE="doc"
 
 BDEPEND="doc? ( virtual/latex-base )"
-DEPEND="dev-libs/gmp:0=[cxx]
+DEPEND="dev-libs/gmp:0=[cxx(+)]
 	sci-libs/cddlib:0="
 RDEPEND="${DEPEND}"
 

[gentoo-commits] repo/gentoo:master commit in: sci-mathematics/gfan/

[Michael Orlitzky]

commit:     033921e6456dcaeef51ded6440621d734088dd5a
Author:     Michael Orlitzky <mjo <AT> gentoo <DOT> org>
AuthorDate: Tue Jan 25 11:43:16 2022 +0000
Commit:     Michael Orlitzky <mjo <AT> gentoo <DOT> org>
CommitDate: Tue Jan 25 11:46:43 2022 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=033921e6

sci-mathematics/gfan: new revision to fix the doc build.

Something changed with LaTeX and now we need a different set of
commands to build the manual.

Closes: https://bugs.gentoo.org/830091
Package-Manager: Portage-3.0.28, Repoman-3.0.3
Signed-off-by: Michael Orlitzky <mjo <AT> gentoo.org>

 sci-mathematics/gfan/gfan-0.6.2-r4.ebuild | 71 +++++++++++++++++++++++++++++++
 1 file changed, 71 insertions(+)

diff --git a/sci-mathematics/gfan/gfan-0.6.2-r4.ebuild b/sci-mathematics/gfan/gfan-0.6.2-r4.ebuild
new file mode 100644
index 000000000000..6ef0572a0ec3
--- /dev/null
+++ b/sci-mathematics/gfan/gfan-0.6.2-r4.ebuild
@@ -0,0 +1,71 @@
+# Copyright 1999-2022 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=8
+
+inherit flag-o-matic toolchain-funcs
+
+DESCRIPTION="Compute Groebner fans and tropical varieties"
+HOMEPAGE="https://users-math.au.dk/~jensen/software/gfan/gfan.html"
+SRC_URI="https://users-math.au.dk/~jensen/software/${PN}/${PN}${PV}.tar.gz"
+
+LICENSE="GPL-2+"
+SLOT="0"
+KEYWORDS="~amd64 ~arm ~x86 ~amd64-linux ~x86-linux"
+IUSE="doc"
+
+BDEPEND="doc? ( virtual/latex-base )"
+DEPEND="dev-libs/gmp:0=[cxx(+)]
+	sci-libs/cddlib:0="
+RDEPEND="${DEPEND}"
+
+S="${WORKDIR}/${PN}${PV}"
+
+PATCHES=(
+	"${FILESDIR}/${PN}-0.6.2-xcode9.3_compat.patch"
+	"${FILESDIR}/${PN}-0.6.2-testsuite.patch"
+	"${FILESDIR}/${PN}-0.6.2-Makefile.patch"
+	)
+
+pkg_setup() {
+	tc-export CC CXX
+
+	# This should really go in cppflags, but that doesn't work with
+	# gfan's hand-written Makefile.
+	append-cxxflags -DNOCDDPREFIX -I"${EPREFIX}"/usr/include/cddlib
+}
+
+src_prepare() {
+	default
+
+	# This test hangs on x86, bug 717112.
+	rm -r testsuite/0602ResultantFanProjection || \
+		die "unable to disable test 0602ResultantFanProjection"
+}
+
+src_configure() {
+	# The upstream Makefile says that GCC produces bad code with -O3.
+	replace-flags "-O3" "-O2"
+	default
+}
+
+src_compile() {
+	default
+	if use doc; then
+		pushd doc > /dev/null || die
+		# The LaTeX build commands need to be repeated until the
+		# document "stops changing," which is not as easy as it
+		# sounds to detect. Running it twice seems to work here.
+		for iteration in 1 2; do
+			latex manual.tex && \
+				bibtex manual && \
+				dvipdf manual.dvi manual.pdf || die
+		done
+		popd > /dev/null || die
+	fi
+}
+
+src_install() {
+	emake PREFIX="${ED}/usr" install
+	use doc && dodoc doc/manual.pdf
+}

[gentoo-commits] repo/gentoo:master commit in: sci-mathematics/gfan/

[Michael Orlitzky]

commit:     1c38dbf8389e230596629b3ce1a1bb9d2ffc2e84
Author:     Michael Orlitzky <mjo <AT> gentoo <DOT> org>
AuthorDate: Tue Jan 25 13:01:14 2022 +0000
Commit:     Michael Orlitzky <mjo <AT> gentoo <DOT> org>
CommitDate: Tue Jan 25 13:32:19 2022 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=1c38dbf8

sci-mathematics/gfan: disable test that fails on x86.

Closes: https://bugs.gentoo.org/818397
Package-Manager: Portage-3.0.28, Repoman-3.0.3
Signed-off-by: Michael Orlitzky <mjo <AT> gentoo.org>

 sci-mathematics/gfan/gfan-0.6.2-r4.ebuild | 4 ++++
 1 file changed, 4 insertions(+)

diff --git a/sci-mathematics/gfan/gfan-0.6.2-r4.ebuild b/sci-mathematics/gfan/gfan-0.6.2-r4.ebuild
index 6ef0572a0ec3..13b77d43b8ad 100644
--- a/sci-mathematics/gfan/gfan-0.6.2-r4.ebuild
+++ b/sci-mathematics/gfan/gfan-0.6.2-r4.ebuild
@@ -41,6 +41,10 @@ src_prepare() {
 	# This test hangs on x86, bug 717112.
 	rm -r testsuite/0602ResultantFanProjection || \
 		die "unable to disable test 0602ResultantFanProjection"
+
+	# And this one fails (harmlessly) on x86, bug 818397.
+	rm -r testsuite/0009RenderStairCase || \
+		die "unable to disable test 0009RenderStairCase"
 }
 
 src_configure() {

[gentoo-commits] repo/gentoo:master commit in: sci-mathematics/gfan/

[Jakov Smolić]

commit:     b2b5d9fb6cab1ee5cdf1ac7b99fb4d661e885d96
Author:     Jakov Smolić <jsmolic <AT> gentoo <DOT> org>
AuthorDate: Wed Jan 26 20:16:30 2022 +0000
Commit:     Jakov Smolić <jsmolic <AT> gentoo <DOT> org>
CommitDate: Wed Jan 26 20:17:59 2022 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=b2b5d9fb

sci-mathematics/gfan: Stabilize 0.6.2-r4 x86, #832044

Signed-off-by: Jakov Smolić <jsmolic <AT> gentoo.org>

 sci-mathematics/gfan/gfan-0.6.2-r4.ebuild | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/sci-mathematics/gfan/gfan-0.6.2-r4.ebuild b/sci-mathematics/gfan/gfan-0.6.2-r4.ebuild
index 13b77d43b8ad..035c8c110229 100644
--- a/sci-mathematics/gfan/gfan-0.6.2-r4.ebuild
+++ b/sci-mathematics/gfan/gfan-0.6.2-r4.ebuild
@@ -11,7 +11,7 @@ SRC_URI="https://users-math.au.dk/~jensen/software/${PN}/${PN}${PV}.tar.gz"
 
 LICENSE="GPL-2+"
 SLOT="0"
-KEYWORDS="~amd64 ~arm ~x86 ~amd64-linux ~x86-linux"
+KEYWORDS="~amd64 ~arm x86 ~amd64-linux ~x86-linux"
 IUSE="doc"
 
 BDEPEND="doc? ( virtual/latex-base )"

[gentoo-commits] repo/gentoo:master commit in: sci-mathematics/gfan/

[Jakov Smolić]

commit:     3033c4f2544e301ab09e304524c9d8ec24bce9af
Author:     Jakov Smolić <jsmolic <AT> gentoo <DOT> org>
AuthorDate: Wed Jan 26 20:24:26 2022 +0000
Commit:     Jakov Smolić <jsmolic <AT> gentoo <DOT> org>
CommitDate: Wed Jan 26 20:24:26 2022 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=3033c4f2

sci-mathematics/gfan: Stabilize 0.6.2-r4 amd64, #832044

Signed-off-by: Jakov Smolić <jsmolic <AT> gentoo.org>

 sci-mathematics/gfan/gfan-0.6.2-r4.ebuild | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/sci-mathematics/gfan/gfan-0.6.2-r4.ebuild b/sci-mathematics/gfan/gfan-0.6.2-r4.ebuild
index 035c8c110229..1ec0a87690e9 100644
--- a/sci-mathematics/gfan/gfan-0.6.2-r4.ebuild
+++ b/sci-mathematics/gfan/gfan-0.6.2-r4.ebuild
@@ -11,7 +11,7 @@ SRC_URI="https://users-math.au.dk/~jensen/software/${PN}/${PN}${PV}.tar.gz"
 
 LICENSE="GPL-2+"
 SLOT="0"
-KEYWORDS="~amd64 ~arm x86 ~amd64-linux ~x86-linux"
+KEYWORDS="amd64 ~arm x86 ~amd64-linux ~x86-linux"
 IUSE="doc"
 
 BDEPEND="doc? ( virtual/latex-base )"

[gentoo-commits] repo/gentoo:master commit in: sci-mathematics/gfan/

[Michael Orlitzky]

commit:     e347c86f458b202e25985944ec097f72e94f3f23
Author:     Michael Orlitzky <mjo <AT> gentoo <DOT> org>
AuthorDate: Thu Jan 27 13:29:07 2022 +0000
Commit:     Michael Orlitzky <mjo <AT> gentoo <DOT> org>
CommitDate: Thu Jan 27 13:29:07 2022 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=e347c86f

sci-mathematics/gfan: remove old "unused" ebuilds.

Package-Manager: Portage-3.0.30, Repoman-3.0.3
Signed-off-by: Michael Orlitzky <mjo <AT> gentoo.org>

 sci-mathematics/gfan/gfan-0.6.2-r2.ebuild | 67 -------------------------------
 sci-mathematics/gfan/gfan-0.6.2-r3.ebuild | 67 -------------------------------
 2 files changed, 134 deletions(-)

diff --git a/sci-mathematics/gfan/gfan-0.6.2-r2.ebuild b/sci-mathematics/gfan/gfan-0.6.2-r2.ebuild
deleted file mode 100644
index 24132c367b9e..000000000000
--- a/sci-mathematics/gfan/gfan-0.6.2-r2.ebuild
+++ /dev/null
@@ -1,67 +0,0 @@
-# Copyright 1999-2021 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-inherit flag-o-matic toolchain-funcs
-
-DESCRIPTION="Compute Groebner fans and tropical varieties"
-HOMEPAGE="https://users-math.au.dk/~jensen/software/gfan/gfan.html"
-SRC_URI="https://users-math.au.dk/~jensen/software/${PN}/${PN}${PV}.tar.gz"
-
-LICENSE="GPL-2+"
-SLOT="0"
-KEYWORDS="amd64 ~arm x86 ~amd64-linux ~x86-linux"
-IUSE="doc"
-
-BDEPEND="doc? ( virtual/latex-base )"
-DEPEND="dev-libs/gmp:0=[cxx(+)]
-	sci-libs/cddlib:0="
-RDEPEND="${DEPEND}"
-
-S="${WORKDIR}/${PN}${PV}"
-
-PATCHES=(
-	"${FILESDIR}/${PN}-0.6.2-xcode9.3_compat.patch"
-	"${FILESDIR}/${PN}-0.6.2-testsuite.patch"
-	"${FILESDIR}/${PN}-0.6.2-Makefile.patch"
-	)
-
-pkg_setup() {
-	tc-export CC CXX
-
-	# This should really go in cppflags, but that doesn't work with
-	# gfan's hand-written Makefile.
-	append-cxxflags -DNOCDDPREFIX
-}
-
-src_prepare() {
-	default
-
-	# This test hangs on x86, bug 717112.
-	rm -r testsuite/0602ResultantFanProjection || \
-		die "unable to disable test 0602ResultantFanProjection"
-}
-
-src_configure() {
-	# The upstream Makefile says that GCC produces bad code with -O3.
-	replace-flags "-O3" "-O2"
-	default
-}
-
-src_compile() {
-	default
-	if use doc; then
-		pushd doc > /dev/null || die
-		# The LaTeX build commands need to be repeated until the
-		# document "stops changing," which is not as easy as it
-		# sounds to detect. Running it twice seems to work here.
-		pdflatex manual.tex && bibtex manual && pdflatex manual.tex || die
-		popd > /dev/null || die
-	fi
-}
-
-src_install() {
-	emake PREFIX="${ED}/usr" install
-	use doc && dodoc doc/manual.pdf
-}

diff --git a/sci-mathematics/gfan/gfan-0.6.2-r3.ebuild b/sci-mathematics/gfan/gfan-0.6.2-r3.ebuild
deleted file mode 100644
index 00132defd82f..000000000000
--- a/sci-mathematics/gfan/gfan-0.6.2-r3.ebuild
+++ /dev/null
@@ -1,67 +0,0 @@
-# Copyright 1999-2021 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-inherit flag-o-matic toolchain-funcs
-
-DESCRIPTION="Compute Groebner fans and tropical varieties"
-HOMEPAGE="https://users-math.au.dk/~jensen/software/gfan/gfan.html"
-SRC_URI="https://users-math.au.dk/~jensen/software/${PN}/${PN}${PV}.tar.gz"
-
-LICENSE="GPL-2+"
-SLOT="0"
-KEYWORDS="amd64 ~arm ~x86 ~amd64-linux ~x86-linux"
-IUSE="doc"
-
-BDEPEND="doc? ( virtual/latex-base )"
-DEPEND="dev-libs/gmp:0=[cxx(+)]
-	sci-libs/cddlib:0="
-RDEPEND="${DEPEND}"
-
-S="${WORKDIR}/${PN}${PV}"
-
-PATCHES=(
-	"${FILESDIR}/${PN}-0.6.2-xcode9.3_compat.patch"
-	"${FILESDIR}/${PN}-0.6.2-testsuite.patch"
-	"${FILESDIR}/${PN}-0.6.2-Makefile.patch"
-	)
-
-pkg_setup() {
-	tc-export CC CXX
-
-	# This should really go in cppflags, but that doesn't work with
-	# gfan's hand-written Makefile.
-	append-cxxflags -DNOCDDPREFIX -I"${EPREFIX}"/usr/include/cddlib
-}
-
-src_prepare() {
-	default
-
-	# This test hangs on x86, bug 717112.
-	rm -r testsuite/0602ResultantFanProjection || \
-		die "unable to disable test 0602ResultantFanProjection"
-}
-
-src_configure() {
-	# The upstream Makefile says that GCC produces bad code with -O3.
-	replace-flags "-O3" "-O2"
-	default
-}
-
-src_compile() {
-	default
-	if use doc; then
-		pushd doc > /dev/null || die
-		# The LaTeX build commands need to be repeated until the
-		# document "stops changing," which is not as easy as it
-		# sounds to detect. Running it twice seems to work here.
-		pdflatex manual.tex && bibtex manual && pdflatex manual.tex || die
-		popd > /dev/null || die
-	fi
-}
-
-src_install() {
-	emake PREFIX="${ED}/usr" install
-	use doc && dodoc doc/manual.pdf
-}

[gentoo-commits] repo/gentoo:master commit in: sci-mathematics/gfan/

[Sam James]

commit:     46b9cf346a38c8ac7e937bb7f83680498292dfeb
Author:     Eli Schwartz <eschwartz93 <AT> gmail <DOT> com>
AuthorDate: Thu Mar 21 23:57:48 2024 +0000
Commit:     Sam James <sam <AT> gentoo <DOT> org>
CommitDate: Fri Mar 22 05:31:50 2024 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=46b9cf34

sci-mathematics/gfan: mark as LTO-unsafe

Closes: https://bugs.gentoo.org/863044
Signed-off-by: Eli Schwartz <eschwartz93 <AT> gmail.com>
Signed-off-by: Sam James <sam <AT> gentoo.org>

 sci-mathematics/gfan/gfan-0.6.2-r4.ebuild | 7 ++++++-
 1 file changed, 6 insertions(+), 1 deletion(-)

diff --git a/sci-mathematics/gfan/gfan-0.6.2-r4.ebuild b/sci-mathematics/gfan/gfan-0.6.2-r4.ebuild
index e4c81181dbaf..29b330866f46 100644
--- a/sci-mathematics/gfan/gfan-0.6.2-r4.ebuild
+++ b/sci-mathematics/gfan/gfan-0.6.2-r4.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2023 Gentoo Authors
+# Copyright 1999-2024 Gentoo Authors
 # Distributed under the terms of the GNU General Public License v2
 
 EAPI=8
@@ -48,6 +48,11 @@ src_prepare() {
 }
 
 src_configure() {
+	# -Werror=odr
+	# https://bugs.gentoo.org/863044
+	# Only contact method is email. I have sent one detailing the issue.
+	filter-lto
+
 	# The upstream Makefile says that GCC produces bad code with -O3.
 	replace-flags "-O3" "-O2"
 	default

[gentoo-commits] repo/gentoo:master commit in: sci-mathematics/gfan/

[Michael Orlitzky]

commit:     722d64503f60f2aa1184d859fe4579355a3aabfc
Author:     Michael Orlitzky <mjo <AT> gentoo <DOT> org>
AuthorDate: Tue Aug 27 00:02:02 2024 +0000
Commit:     Michael Orlitzky <mjo <AT> gentoo <DOT> org>
CommitDate: Tue Aug 27 00:20:53 2024 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=722d6450

sci-mathematics/gfan: fix cosmetic pkgcheck warning

Signed-off-by: Michael Orlitzky <mjo <AT> gentoo.org>

 sci-mathematics/gfan/gfan-0.6.2-r4.ebuild | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/sci-mathematics/gfan/gfan-0.6.2-r4.ebuild b/sci-mathematics/gfan/gfan-0.6.2-r4.ebuild
index fb1145fd9cb3..fe1b428750be 100644
--- a/sci-mathematics/gfan/gfan-0.6.2-r4.ebuild
+++ b/sci-mathematics/gfan/gfan-0.6.2-r4.ebuild
@@ -9,6 +9,8 @@ DESCRIPTION="Compute Groebner fans and tropical varieties"
 HOMEPAGE="https://users-math.au.dk/~jensen/software/gfan/gfan.html"
 SRC_URI="https://users-math.au.dk/~jensen/software/${PN}/${PN}${PV}.tar.gz"
 
+S="${WORKDIR}/${PN}${PV}"
+
 LICENSE="GPL-2+"
 SLOT="0"
 KEYWORDS="amd64 ~arm ~riscv ~x86 ~amd64-linux ~x86-linux"
@@ -19,8 +21,6 @@ DEPEND="dev-libs/gmp:0=[cxx(+)]
 	sci-libs/cddlib:0="
 RDEPEND="${DEPEND}"
 
-S="${WORKDIR}/${PN}${PV}"
-
 PATCHES=(
 	"${FILESDIR}/${PN}-0.6.2-xcode9.3_compat.patch"
 	"${FILESDIR}/${PN}-0.6.2-testsuite.patch"

[gentoo-commits] repo/gentoo:master commit in: sci-mathematics/gfan/

[Michael Orlitzky]

commit:     9b4cf8889dff09ab10c16c804329bb16f98d8f5f
Author:     Michael Orlitzky <mjo <AT> gentoo <DOT> org>
AuthorDate: Sun Aug 25 22:00:14 2024 +0000
Commit:     Michael Orlitzky <mjo <AT> gentoo <DOT> org>
CommitDate: Tue Aug 27 00:20:50 2024 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=9b4cf888

sci-mathematics/gfan: keyword 0.6.2-r4 for ~riscv

Signed-off-by: Michael Orlitzky <mjo <AT> gentoo.org>

 sci-mathematics/gfan/gfan-0.6.2-r4.ebuild | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/sci-mathematics/gfan/gfan-0.6.2-r4.ebuild b/sci-mathematics/gfan/gfan-0.6.2-r4.ebuild
index 29b330866f46..fb1145fd9cb3 100644
--- a/sci-mathematics/gfan/gfan-0.6.2-r4.ebuild
+++ b/sci-mathematics/gfan/gfan-0.6.2-r4.ebuild
@@ -11,7 +11,7 @@ SRC_URI="https://users-math.au.dk/~jensen/software/${PN}/${PN}${PV}.tar.gz"
 
 LICENSE="GPL-2+"
 SLOT="0"
-KEYWORDS="amd64 ~arm ~x86 ~amd64-linux ~x86-linux"
+KEYWORDS="amd64 ~arm ~riscv ~x86 ~amd64-linux ~x86-linux"
 IUSE="doc"
 
 BDEPEND="doc? ( virtual/latex-base )"

[gentoo-commits] repo/gentoo:master commit in: sci-mathematics/gfan/

[Michael Orlitzky]

commit:     a4a3a0d0e64544568ada5244e62f914fa4220566
Author:     Michael Orlitzky <mjo <AT> gentoo <DOT> org>
AuthorDate: Sat Oct  5 14:59:58 2024 +0000
Commit:     Michael Orlitzky <mjo <AT> gentoo <DOT> org>
CommitDate: Sat Oct  5 15:01:00 2024 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=a4a3a0d0

sci-mathematics/gfan: add missing TeX build dep for USE=doc

Closes: https://bugs.gentoo.org/873610
Signed-off-by: Michael Orlitzky <mjo <AT> gentoo.org>

 sci-mathematics/gfan/gfan-0.6.2-r6.ebuild | 7 ++++++-
 1 file changed, 6 insertions(+), 1 deletion(-)

diff --git a/sci-mathematics/gfan/gfan-0.6.2-r6.ebuild b/sci-mathematics/gfan/gfan-0.6.2-r6.ebuild
index c755b754b378..e41f988404b7 100644
--- a/sci-mathematics/gfan/gfan-0.6.2-r6.ebuild
+++ b/sci-mathematics/gfan/gfan-0.6.2-r6.ebuild
@@ -16,7 +16,12 @@ SLOT="0"
 KEYWORDS="~amd64 ~arm ~riscv ~x86 ~amd64-linux ~x86-linux"
 IUSE="doc"
 
-BDEPEND="doc? ( virtual/latex-base )"
+# texlive-plaingeneric is needed for \usepackage{ulem} in
+# the manual
+BDEPEND="doc? (
+	dev-texlive/texlive-plaingeneric
+	virtual/latex-base
+)"
 DEPEND="dev-libs/gmp:0=[cxx(+)]
 	sci-libs/cddlib:0="
 RDEPEND="${DEPEND}"

[gentoo-commits] repo/gentoo:master commit in: sci-mathematics/gfan/

[Michael Orlitzky]

commit:     5da0caba056b0e990c19a383674a1146eea1ed79
Author:     Michael Orlitzky <mjo <AT> gentoo <DOT> org>
AuthorDate: Sat Oct  5 19:07:06 2024 +0000
Commit:     Michael Orlitzky <mjo <AT> gentoo <DOT> org>
CommitDate: Sat Oct  5 19:07:51 2024 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=5da0caba

sci-mathematics/gfan: add another missing USE=doc build dep

We explicitly invoke "dvipdf" from app-text/ghostscript-gpl in the
ebuild.

Closes: https://bugs.gentoo.org/940906
Signed-off-by: Michael Orlitzky <mjo <AT> gentoo.org>

 sci-mathematics/gfan/gfan-0.6.2-r6.ebuild | 3 ++-
 1 file changed, 2 insertions(+), 1 deletion(-)

diff --git a/sci-mathematics/gfan/gfan-0.6.2-r6.ebuild b/sci-mathematics/gfan/gfan-0.6.2-r6.ebuild
index e41f988404b7..538326ff4359 100644
--- a/sci-mathematics/gfan/gfan-0.6.2-r6.ebuild
+++ b/sci-mathematics/gfan/gfan-0.6.2-r6.ebuild
@@ -17,8 +17,9 @@ KEYWORDS="~amd64 ~arm ~riscv ~x86 ~amd64-linux ~x86-linux"
 IUSE="doc"
 
 # texlive-plaingeneric is needed for \usepackage{ulem} in
-# the manual
+# the manual. ghostscript-gpl provides the "dvipdf" command.
 BDEPEND="doc? (
+	app-text/ghostscript-gpl
 	dev-texlive/texlive-plaingeneric
 	virtual/latex-base
 )"