[gentoo-commits] proj/sci:master commit in: sci-biology/parafly/

["Andrew Ammerlaan" <andrewammerlaan@riseup.net>]

commit:     454d4e4876455ed72069bf2343c499b2a5184901
Author:     Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
AuthorDate: Sat Mar  6 13:15:13 2021 +0000
Commit:     Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
CommitDate: Sat Mar  6 13:15:13 2021 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=454d4e48

sci-biology/parafly: fix this, EAPI bump

- fixed description
- fixed homepage
- fixed src_uri

Package-Manager: Portage-3.0.16, Repoman-3.0.2
Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> riseup.net>

 sci-biology/parafly/parafly-0.1.0.ebuild    | 21 +++++++++++++++++++++
 sci-biology/parafly/parafly-20130121.ebuild | 26 --------------------------
 2 files changed, 21 insertions(+), 26 deletions(-)

diff --git a/sci-biology/parafly/parafly-0.1.0.ebuild b/sci-biology/parafly/parafly-0.1.0.ebuild
new file mode 100644
index 000000000..ce1084020
--- /dev/null
+++ b/sci-biology/parafly/parafly-0.1.0.ebuild
@@ -0,0 +1,21 @@
+# Copyright 1999-2021 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+
+DESCRIPTION="Parallel cmd processing utility"
+HOMEPAGE="https://github.com/ParaFly/ParaFly"
+SRC_URI="https://github.com/ParaFly/ParaFly/archive/v${PV}.tar.gz -> ${P}.tar.gz"
+
+LICENSE="BSD-BroadInstitute"
+SLOT="0"
+KEYWORDS="~amd64"
+
+DEPEND=""
+RDEPEND="${DEPEND}"
+
+S="${WORKDIR}/ParaFly-${PV}"
+
+src_configure(){
+	./configure --prefix="${EPREFIX}"/usr
+}

diff --git a/sci-biology/parafly/parafly-20130121.ebuild b/sci-biology/parafly/parafly-20130121.ebuild
deleted file mode 100644
index fe3e26c6c..000000000
--- a/sci-biology/parafly/parafly-20130121.ebuild
+++ /dev/null
@@ -1,26 +0,0 @@
-# Copyright 1999-2020 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-DESCRIPTION="Some dependency for transdecoder"
-HOMEPAGE="https://sourceforge.net/projects/transdecoder/"
-SRC_URI="https://sourceforge.net/projects/transdecoder/files/OLDER/TransDecoder_r20140704.tar.gz"
-# are current sources available only from here?
-# https://github.com/trinityrnaseq/trinityrnaseq/tree/f81f0497a211c84ba4299063086604760933e6e3/trinity-plugins/parafly-code
-
-LICENSE="BSD-BroadInstitute"
-SLOT="0"
-KEYWORDS="~amd64"
-IUSE=""
-
-DEPEND=""
-RDEPEND="${DEPEND}"
-
-S="${WORKDIR}"/TransDecoder_r20140704/3rd_party/parafly-r2013-01-21
-
-# maybe we once the CXXFLAGS and LDFLAGS mentioned
-#   in https://github.com/trinityrnaseq/trinityrnaseq/issues/65 ?
-src_configure(){
-	./configure --prefix="${EPREFIX}"/usr
-}