From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by finch.gentoo.org (Postfix) with ESMTPS id 422A313835A for ; Sat, 6 Mar 2021 10:22:10 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id 7DA59E0858; Sat, 6 Mar 2021 10:22:09 +0000 (UTC) Received: from smtp.gentoo.org (smtp.gentoo.org [140.211.166.183]) (using TLSv1.2 with cipher ECDHE-RSA-AES128-GCM-SHA256 (128/128 bits)) (No client certificate requested) by pigeon.gentoo.org (Postfix) with ESMTPS id 63173E0858 for ; Sat, 6 Mar 2021 10:22:09 +0000 (UTC) Received: from oystercatcher.gentoo.org (unknown [IPv6:2a01:4f8:202:4333:225:90ff:fed9:fc84]) (using TLSv1.2 with cipher ECDHE-RSA-AES128-GCM-SHA256 (128/128 bits)) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id B8CA4340ECE for ; Sat, 6 Mar 2021 10:22:07 +0000 (UTC) Received: from localhost.localdomain (localhost [IPv6:::1]) by oystercatcher.gentoo.org (Postfix) with ESMTP id 3AE0F586 for ; Sat, 6 Mar 2021 10:22:06 +0000 (UTC) From: "Andrew Ammerlaan" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Andrew Ammerlaan" Message-ID: <1615026120.15e9931e71f0d2277dbbe8013a8c75be79101a33.andrewammerlaan@gentoo> Subject: [gentoo-commits] proj/sci:master commit in: sci-biology/cluster/ X-VCS-Repository: proj/sci X-VCS-Files: sci-biology/cluster/cluster-1.52a.ebuild sci-biology/cluster/cluster-1.59.ebuild X-VCS-Directories: sci-biology/cluster/ X-VCS-Committer: andrewammerlaan X-VCS-Committer-Name: Andrew Ammerlaan X-VCS-Revision: 15e9931e71f0d2277dbbe8013a8c75be79101a33 X-VCS-Branch: master Date: Sat, 6 Mar 2021 10:22:06 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Auto-Response-Suppress: DR, RN, NRN, OOF, AutoReply X-Archives-Salt: 5b3cd344-e18c-422b-ac63-2d2ae04ce5a7 X-Archives-Hash: c545608708fc2fb1694028d21f540b8c commit: 15e9931e71f0d2277dbbe8013a8c75be79101a33 Author: Andrew Ammerlaan riseup net> AuthorDate: Sat Mar 6 10:22:00 2021 +0000 Commit: Andrew Ammerlaan riseup net> CommitDate: Sat Mar 6 10:22:00 2021 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=15e9931e sci-biology/cluster: version bump 1.59, fix doc path Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan riseup.net> .../{cluster-1.52a.ebuild => cluster-1.59.ebuild} | 24 ++++++++-------------- 1 file changed, 9 insertions(+), 15 deletions(-) diff --git a/sci-biology/cluster/cluster-1.52a.ebuild b/sci-biology/cluster/cluster-1.59.ebuild similarity index 69% rename from sci-biology/cluster/cluster-1.52a.ebuild rename to sci-biology/cluster/cluster-1.59.ebuild index b798e579b..8a1bf5d7f 100644 --- a/sci-biology/cluster/cluster-1.52a.ebuild +++ b/sci-biology/cluster/cluster-1.59.ebuild @@ -1,12 +1,12 @@ -# Copyright 1999-2015 Gentoo Foundation +# Copyright 1999-2021 Gentoo Authors # Distributed under the terms of the GNU General Public License v2 -EAPI=5 +EAPI=7 DESCRIPTION="Hierarchical, k-means, k-medians clustering for expression/microarray analysis" HOMEPAGE="http://bonsai.hgc.jp/~mdehoon/software/cluster http://bonsai.hgc.jp/~mdehoon/software/cluster/software.htm#ctv" -SRC_URI="${P}.tar.gz" +SRC_URI="http://bonsai.hgc.jp/~mdehoon/software/cluster/${P}.tar.gz" LICENSE="Eisen" SLOT="0" @@ -20,13 +20,8 @@ RDEPEND=" app-text/mupdf )" -RESTRICT="fetch" - -pkg_nofetch() { - einfo "Please obtain ${P}.tar.gz from ${HOMEPAGE} and place it in ${DISTDIR}" -} - src_prepare() { + default sed -i \ -e 's:^docdir = .*$:docdir = @docdir@:' \ -e 's:^htmldir = .*$:htmldir = @htmldir@:' \ @@ -38,8 +33,8 @@ src_prepare() { src_configure() { econf \ $(use_with X x) \ - --docdir="/usr/share/doc/${P}" \ - --htmldir="/usr/share/doc/${P}/html" + --docdir="/usr/share/doc/${PF}" \ + --htmldir="/usr/share/doc/${PF}/html" } src_install() { @@ -47,10 +42,9 @@ src_install() { mv "${ED}"/usr/bin/cluster{,3} || die - insinto /usr/share/doc/${P}/examples - doins example/example.c example/README - insinto /usr/share/doc/${PR} - doins doc/cluster.pdf + dodoc doc/cluster.pdf + docinto examples + dodoc example/example.c example/README } pkg_postinst() {