From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by finch.gentoo.org (Postfix) with ESMTPS id 313371382C5 for ; Sun, 24 Jan 2021 13:54:18 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id 89B6CE0A8B; Sun, 24 Jan 2021 13:54:17 +0000 (UTC) Received: from smtp.gentoo.org (smtp.gentoo.org [140.211.166.183]) (using TLSv1.2 with cipher ECDHE-RSA-AES128-GCM-SHA256 (128/128 bits)) (No client certificate requested) by pigeon.gentoo.org (Postfix) with ESMTPS id 6BDA8E0A8B for ; Sun, 24 Jan 2021 13:54:17 +0000 (UTC) Received: from oystercatcher.gentoo.org (unknown [IPv6:2a01:4f8:202:4333:225:90ff:fed9:fc84]) (using TLSv1.2 with cipher ECDHE-RSA-AES128-GCM-SHA256 (128/128 bits)) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id 7CD64335CF5 for ; Sun, 24 Jan 2021 13:54:16 +0000 (UTC) Received: from localhost.localdomain (localhost [IPv6:::1]) by oystercatcher.gentoo.org (Postfix) with ESMTP id 3212C328 for ; Sun, 24 Jan 2021 13:54:15 +0000 (UTC) From: "Andrew Ammerlaan" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Andrew Ammerlaan" Message-ID: <1611496451.843b1f675001ddf24cf56c5b0e9dcd3680111cef.andrewammerlaan@gentoo> Subject: [gentoo-commits] proj/sci:master commit in: sci-biology/SnpEff/ X-VCS-Repository: proj/sci X-VCS-Files: sci-biology/SnpEff/SnpEff-4.3t.ebuild X-VCS-Directories: sci-biology/SnpEff/ X-VCS-Committer: andrewammerlaan X-VCS-Committer-Name: Andrew Ammerlaan X-VCS-Revision: 843b1f675001ddf24cf56c5b0e9dcd3680111cef X-VCS-Branch: master Date: Sun, 24 Jan 2021 13:54:15 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Auto-Response-Suppress: DR, RN, NRN, OOF, AutoReply X-Archives-Salt: 3e745438-40eb-45aa-9bb2-d1b884b89810 X-Archives-Hash: e1eabf7da4bce567ee132a26e4866870 commit: 843b1f675001ddf24cf56c5b0e9dcd3680111cef Author: Andrew Ammerlaan riseup net> AuthorDate: Sun Jan 24 13:51:53 2021 +0000 Commit: Andrew Ammerlaan riseup net> CommitDate: Sun Jan 24 13:54:11 2021 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=843b1f67 sci-biology/SnpEff: fix install Package-Manager: Portage-3.0.14, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan riseup.net> sci-biology/SnpEff/SnpEff-4.3t.ebuild | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/sci-biology/SnpEff/SnpEff-4.3t.ebuild b/sci-biology/SnpEff/SnpEff-4.3t.ebuild index ddece0256..843c00356 100644 --- a/sci-biology/SnpEff/SnpEff-4.3t.ebuild +++ b/sci-biology/SnpEff/SnpEff-4.3t.ebuild @@ -13,7 +13,7 @@ SRC_URI=" LICENSE="LGPL-3" SLOT="0" -KEYWORDS="" +KEYWORDS="~amd64" RDEPEND=" >=virtual/jre-1.7:* @@ -31,8 +31,8 @@ src_install(){ mkdir -p "${ED}"/usr/share || die # but portage does not install the .* files and subdirs, grr! unzip \ - "${DISTDIR}"/snpEff_v"${MY_PV}"_core.zip -d "${ED}"/usr/share \ - || die "failed to unzip ${DISTDIR}/snpEff_v${MY_PV}_core.zip" + "${DISTDIR}"/snpEff_v"${PV//./_}"_core.zip -d "${ED}"/usr/share \ + || die "failed to unzip ${DISTDIR}/snpEff_v${PV//./_}_core.zip" sed \ -e "s#$HOME/tools/picard/#${ED}/usr/share/picard/lib/#" \ -i "${ED}"/usr/share/snpEff/scripts/annotate_demo_GATK.sh || die