[gentoo-commits] proj/sci:master commit in: sci-biology/sclust/

[gentoo-commits] proj/sci:master commit in: sci-biology/sclust/

[Justin Lecher]

commit:     31a0bc7c3d9f2e6663f5642e41e7c1ee0f402204
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Tue Sep 22 07:54:59 2015 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Tue Sep 22 07:54:59 2015 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=31a0bc7c

sci-biology/sclust: Bump to EAPI=5

Package-Manager: portage-2.2.21
Signed-off-by: Justin Lecher <jlec <AT> gentoo.org>

 sci-biology/sclust/sclust-0.1.ebuild | 16 +++++++---------
 1 file changed, 7 insertions(+), 9 deletions(-)

diff --git a/sci-biology/sclust/sclust-0.1.ebuild b/sci-biology/sclust/sclust-0.1.ebuild
index 4916ef1..cb5fe1f 100644
--- a/sci-biology/sclust/sclust-0.1.ebuild
+++ b/sci-biology/sclust/sclust-0.1.ebuild
@@ -1,22 +1,20 @@
-# Copyright 1999-2014 Gentoo Foundation
+# Copyright 1999-2015 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
 # $Id$
 
-EAPI=3
+EAPI=5
 
 DESCRIPTION="seeded clustering tool by processing pairwise alignments from TIGR Gene Indices project tools"
 HOMEPAGE="http://compbio.dfci.harvard.edu/tgi/software/"
-SRC_URI="ftp://occams.dfci.harvard.edu/pub/bio/tgi/software/tgicl/${PN}.tar.gz
-		ftp://occams.dfci.harvard.edu/pub/bio/tgi/software/tgicl/cdbfasta.tar.gz"
+SRC_URI="
+	ftp://occams.dfci.harvard.edu/pub/bio/tgi/software/tgicl/${PN}.tar.gz
+	ftp://occams.dfci.harvard.edu/pub/bio/tgi/software/tgicl/cdbfasta.tar.gz"
 
 LICENSE="Artistic"
 SLOT="0"
 KEYWORDS="~amd64 ~x86"
 IUSE=""
 
-DEPEND=""
-RDEPEND="${DEPEND}"
-
 S=${WORKDIR}
 
 src_prepare() {
@@ -29,11 +27,11 @@ src_prepare() {
 
 src_compile() {
 	cd ${PN} || die
-	emake || die "emake failed in "${S}"/${PN}"
+	default
 }
 
 src_install() {
 	cd ${PN} || die
-	dobin ${PN} || die "Failed to install ${PN} binary"
+	dobin ${PN}
 	newdoc README README.${PN}
 }

[gentoo-commits] proj/sci:master commit in: sci-biology/sclust/

[Andrew Ammerlaan]

commit:     99f9dfabe1643d64da0adc89b6fe937b698805dd
Author:     Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
AuthorDate: Tue Jan 19 16:31:35 2021 +0000
Commit:     Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
CommitDate: Tue Jan 19 16:31:35 2021 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=99f9dfab

sci-biology/sclust: properly name tarball

Package-Manager: Portage-3.0.13, Repoman-3.0.2
Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> riseup.net>

 sci-biology/sclust/sclust-0.1.ebuild | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/sci-biology/sclust/sclust-0.1.ebuild b/sci-biology/sclust/sclust-0.1.ebuild
index a4c16f997..ee8f3c5c1 100644
--- a/sci-biology/sclust/sclust-0.1.ebuild
+++ b/sci-biology/sclust/sclust-0.1.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2015 Gentoo Foundation
+# Copyright 1999-2021 Gentoo Authors
 # Distributed under the terms of the GNU General Public License v2
 
 EAPI=5
@@ -6,7 +6,7 @@ EAPI=5
 DESCRIPTION="Seeded clustering tool by processing pairwise alignments"
 HOMEPAGE="http://compbio.dfci.harvard.edu/tgi/software/"
 SRC_URI="
-	ftp://occams.dfci.harvard.edu/pub/bio/tgi/software/tgicl/${PN}.tar.gz
+	ftp://occams.dfci.harvard.edu/pub/bio/tgi/software/tgicl/${PN}.tar.gz -> ${P}.tar.gz
 	ftp://occams.dfci.harvard.edu/pub/bio/tgi/software/tgicl/cdbfasta.tar.gz"
 
 LICENSE="Artistic"