[gentoo-commits] proj/sci:master commit in: sci-biology/pvmsx/

["Aisha Tammy" <gentoo@aisha.cc>]

commit:     d08f55efd3ed478e2ebf4a68bc83ee36e875c33c
Author:     Aisha Tammy <gentoo <AT> aisha <DOT> cc>
AuthorDate: Mon Jan 18 21:38:14 2021 +0000
Commit:     Aisha Tammy <gentoo <AT> aisha <DOT> cc>
CommitDate: Mon Jan 18 21:38:44 2021 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=d08f55ef

sci-biology/pvmsx: drop dead package

upstream has not updated in 14 years
Closes: https://bugs.gentoo.org/755830

Signed-off-by: Aisha Tammy <gentoo <AT> aisha.cc>

 sci-biology/pvmsx/metadata.xml     | 12 -----------
 sci-biology/pvmsx/pvmsx-0.1.ebuild | 43 --------------------------------------
 2 files changed, 55 deletions(-)

diff --git a/sci-biology/pvmsx/metadata.xml b/sci-biology/pvmsx/metadata.xml
deleted file mode 100644
index 138cb7705..000000000
--- a/sci-biology/pvmsx/metadata.xml
+++ /dev/null
@@ -1,12 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-	<maintainer type="person">
-		<email>mmokrejs@fold.natur.cuni.cz</email>
-		<name>Martin Mokrejs</name>
-	</maintainer>
-	<maintainer type="project">
-		<email>sci-biology@gentoo.org</email>
-		<name>Gentoo Biology Project</name>
-	</maintainer>
-</pkgmetadata>

diff --git a/sci-biology/pvmsx/pvmsx-0.1.ebuild b/sci-biology/pvmsx/pvmsx-0.1.ebuild
deleted file mode 100644
index b88863a45..000000000
--- a/sci-biology/pvmsx/pvmsx-0.1.ebuild
+++ /dev/null
@@ -1,43 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-DESCRIPTION="Parallel multi-FASTA file processing tool"
-HOMEPAGE="http://compbio.dfci.harvard.edu/tgi/software/"
-SRC_URI="
-	ftp://occams.dfci.harvard.edu/pub/bio/tgi/software/tgicl/${PN}.tar.gz
-	ftp://occams.dfci.harvard.edu/pub/bio/tgi/software/tgicl/cdbfasta.tar.gz"
-
-LICENSE="Artistic"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE=""
-
-#DEPEND="sys-cluster/pvm"
-#RDEPEND="${DEPEND}"
-
-S=${WORKDIR}
-
-src_prepare() {
-	# we need gclib from cdbfasta.tar.gz bundle which has fewer files than tgi_cpp_library.tar.gz wbut has e.g. GStr.h
-	sed \
-		-e 's/CFLAGS[ ]*=/CFLAGS :=/; s/-D_REENTRANT/-D_REENTRANT \${CFLAGS}/; s/CFLAGS[ ]*:=[ ]*-O2$//' \
-		-i "${S}"/Makefile || die "Failed to run sed"
-	sed \
-		-e 's#GCLDIR := ../gclib#GCLDIR := ../cdbfasta/gclib#' \
-		-i "${S}"/Makefile || die
-	sed \
-		-e "s#-I-#-iquote#" \
-		-i "${S}"/Makefile || die
-	ln -s ../cdbfasta/gcl . || die "Cannot make a softlink"
-}
-
-src_compile() {
-	default
-}
-
-src_install() {
-	dobin ${PN}
-	newdoc README README.${PN}
-}