From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by finch.gentoo.org (Postfix) with ESMTPS id E65E11382C5 for ; Mon, 18 Jan 2021 12:53:23 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id 2DD23E082F; Mon, 18 Jan 2021 12:53:23 +0000 (UTC) Received: from smtp.gentoo.org (mail.gentoo.org [IPv6:2001:470:ea4a:1:5054:ff:fec7:86e4]) (using TLSv1.2 with cipher ECDHE-RSA-AES128-GCM-SHA256 (128/128 bits)) (No client certificate requested) by pigeon.gentoo.org (Postfix) with ESMTPS id 1414EE082F for ; Mon, 18 Jan 2021 12:53:23 +0000 (UTC) Received: from oystercatcher.gentoo.org (unknown [IPv6:2a01:4f8:202:4333:225:90ff:fed9:fc84]) (using TLSv1.2 with cipher ECDHE-RSA-AES128-GCM-SHA256 (128/128 bits)) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id 98685340FEF for ; Mon, 18 Jan 2021 12:53:21 +0000 (UTC) Received: from localhost.localdomain (localhost [IPv6:::1]) by oystercatcher.gentoo.org (Postfix) with ESMTP id 4BB853A6 for ; Mon, 18 Jan 2021 12:53:20 +0000 (UTC) From: "Andrew Ammerlaan" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Andrew Ammerlaan" Message-ID: <1610974376.538fa4471cb85c2a2e2c2ddfa47f423a7690414a.andrewammerlaan@gentoo> Subject: [gentoo-commits] proj/sci:master commit in: sci-biology/VelvetOptimiser/ X-VCS-Repository: proj/sci X-VCS-Files: sci-biology/VelvetOptimiser/VelvetOptimiser-2.2.5.ebuild sci-biology/VelvetOptimiser/VelvetOptimiser-2.2.6.ebuild X-VCS-Directories: sci-biology/VelvetOptimiser/ X-VCS-Committer: andrewammerlaan X-VCS-Committer-Name: Andrew Ammerlaan X-VCS-Revision: 538fa4471cb85c2a2e2c2ddfa47f423a7690414a X-VCS-Branch: master Date: Mon, 18 Jan 2021 12:53:20 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Auto-Response-Suppress: DR, RN, NRN, OOF, AutoReply X-Archives-Salt: 2c35fa59-2623-4c05-845b-c366a90533bb X-Archives-Hash: c6f7ec0d4f7533a9a679147fa41bdfc4 commit: 538fa4471cb85c2a2e2c2ddfa47f423a7690414a Author: Andrew Ammerlaan riseup net> AuthorDate: Mon Jan 18 12:52:56 2021 +0000 Commit: Andrew Ammerlaan riseup net> CommitDate: Mon Jan 18 12:52:56 2021 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=538fa447 sci-biology/VelvetOptimiser: version bump 2.2.6, fetching fixed Package-Manager: Portage-3.0.13, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan riseup.net> ...Optimiser-2.2.5.ebuild => VelvetOptimiser-2.2.6.ebuild} | 14 ++++++-------- 1 file changed, 6 insertions(+), 8 deletions(-) diff --git a/sci-biology/VelvetOptimiser/VelvetOptimiser-2.2.5.ebuild b/sci-biology/VelvetOptimiser/VelvetOptimiser-2.2.6.ebuild similarity index 64% rename from sci-biology/VelvetOptimiser/VelvetOptimiser-2.2.5.ebuild rename to sci-biology/VelvetOptimiser/VelvetOptimiser-2.2.6.ebuild index f5ad6e636..e000e6290 100644 --- a/sci-biology/VelvetOptimiser/VelvetOptimiser-2.2.5.ebuild +++ b/sci-biology/VelvetOptimiser/VelvetOptimiser-2.2.6.ebuild @@ -1,21 +1,19 @@ -# Copyright 1999-2017 Gentoo Foundation +# Copyright 1999-2021 Gentoo Authors # Distributed under the terms of the GNU General Public License v2 -EAPI=6 +EAPI=7 inherit perl-functions DESCRIPTION="Optimise Velvet sequence assembler" -HOMEPAGE="http://www.vicbioinformatics.com/software.velvetoptimiser.shtml" -SRC_URI="http://www.vicbioinformatics.com/"${P}".tar.gz" +HOMEPAGE="https://vicbioinformatics.com/software.velvetoptimiser.shtml" +SRC_URI="https://github.com/tseemann/VelvetOptimiser/archive/${PV}.tar.gz -> ${P}.tar.gz" LICENSE="GPL-2" SLOT="0" KEYWORDS="~amd64" -IUSE="" -DEPEND="" -RDEPEND="${DEPEND} +RDEPEND=" >=sci-biology/bioperl-1.4 >=sci-biology/velvet-0.7.5.1 dev-lang/perl[ithreads]" # actually >=5.8 but make sure 5.16 is recognized as > 5.8, heh @@ -25,5 +23,5 @@ src_install(){ perl_set_version insinto ${VENDOR_LIB}/VelvetOpt doins VelvetOpt/*.pm - dodoc README INSTALL CHANGELOG + einstalldocs }