[gentoo-commits] proj/sci:master commit in: sci-chemistry/mdsctk/

["Andrew Ammerlaan" <andrewammerlaan@riseup.net>]

commit:     1286cafb69a932e2f236c37867fcbbc07142a323
Author:     Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
AuthorDate: Tue Jan  5 19:19:27 2021 +0000
Commit:     Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
CommitDate: Tue Jan  5 19:20:34 2021 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=1286cafb

sci-chemistry/mdsctk: drop pack, last update 2015, no compat w. gromacs::gentoo

Package-Manager: Portage-3.0.12, Repoman-3.0.2
Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> riseup.net>

 sci-chemistry/mdsctk/mdsctk-1.2.0.ebuild | 43 --------------------------------
 sci-chemistry/mdsctk/metadata.xml        | 18 -------------
 2 files changed, 61 deletions(-)

diff --git a/sci-chemistry/mdsctk/mdsctk-1.2.0.ebuild b/sci-chemistry/mdsctk/mdsctk-1.2.0.ebuild
deleted file mode 100644
index 1a099e69c..000000000
--- a/sci-chemistry/mdsctk/mdsctk-1.2.0.ebuild
+++ /dev/null
@@ -1,43 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-inherit cmake-utils db-use toolchain-funcs
-
-DESCRIPTION="Molecular Dynamics Spectral Clustering Toolkit"
-HOMEPAGE="https://github.com/douradopalmares/mdsctk"
-SRC_URI="https://github.com/douradopalmares/${PN}/archive/${PV}.tar.gz -> ${P}.tar.gz"
-
-LICENSE="GPL-2"
-SLOT="0"
-KEYWORDS=""
-IUSE="examples R"
-
-DEPEND="
-	=sci-chemistry/gromacs-4.6*:=
-	sci-libs/gsl
-	sys-libs/db:=[cxx]
-	virtual/blas
-	virtual/lapack
-	sci-libs/arpack
-	R? ( dev-lang/R )
-	"
-RDEPEND="${DEPEND}"
-
-src_configure() {
-	echo 'include_directories(${DB_CXX_INCLUDE_PATH})' >> CMakeLists.txt
-	local mycmakeargs=( -DDB_CXX_INCLUDE_PATH="$(db_includedir)" )
-	cmake-utils_src_configure
-}
-
-src_install() {
-	dodoc AUTHORS README.md
-	use R && dobin clustering_nmi.r  clustering_pdf.r  density.r  entropy.r  kmeans.r  mdsctk.r  plot_pdf.r \
-		probability.r
-	insinto /usr/share/"${PN}"/examples
-	use examples && doins -r examples
-	cd "${BUILD_DIR}" || die
-	dobin auto_decomp_sparse auto_decomp_sparse_nystrom bb_xtc_to_phipsi check_xtc decomp_sparse decomp_sparse_nystrom \
-		knn_data knn_rms make_sysparse make_gesparse phipsi_to_sincos rms_test split_xtc
-}

diff --git a/sci-chemistry/mdsctk/metadata.xml b/sci-chemistry/mdsctk/metadata.xml
deleted file mode 100644
index 466c91299..000000000
--- a/sci-chemistry/mdsctk/metadata.xml
+++ /dev/null
@@ -1,18 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-	<maintainer type="person">
-		<email>ottxor@gentoo.org</email>
-		<name>Christoph Junghans</name>
-	</maintainer>
-	<maintainer type="project">
-		<email>sci-chemistry@gentoo.org</email>
-		<name>Gentoo Chemistry Project</name>
-	</maintainer>
-	<use>
-		<flag name="R">Install <pkg>dev-lang/R</pkg> scripts as well</flag>
-	</use>
-	<upstream>
-		<remote-id type="github">douradopalmares/mdsctk</remote-id>
-	</upstream>
-</pkgmetadata>