[gentoo-commits] proj/sci:master commit in: dev-python/bcbio-gff/

[gentoo-commits] proj/sci:master commit in: dev-python/bcbio-gff/

[Martin Mokrejs]

commit:     5082d6784b4349f55d788f238d5ef89676fb153a
Author:     Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Thu Apr 20 16:53:44 2017 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Thu Apr 20 16:53:44 2017 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=5082d678

dev-python/bcbio-gff: new package

Package-Manager: Portage-2.3.5, Repoman-2.3.2

 dev-python/bcbio-gff/bcbio-gff-0.6.4.ebuild | 19 +++++++++++++++++++
 dev-python/bcbio-gff/metadata.xml           | 12 ++++++++++++
 2 files changed, 31 insertions(+)

diff --git a/dev-python/bcbio-gff/bcbio-gff-0.6.4.ebuild b/dev-python/bcbio-gff/bcbio-gff-0.6.4.ebuild
new file mode 100644
index 000000000..8cebbe010
--- /dev/null
+++ b/dev-python/bcbio-gff/bcbio-gff-0.6.4.ebuild
@@ -0,0 +1,19 @@
+# Copyright 1999-2017 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=6
+
+PYTHON_COMPAT=( python2_7 python3_5 )
+inherit distutils-r1
+
+DESCRIPTION="Read and write Generic Feature Format (GFF) with Biopython"
+HOMEPAGE="https://pypi.python.org/pypi/bcbio-gff"
+SRC_URI="https://pypi.python.org/packages/94/df/e2d75cc688ac6eb53f5fb4e2cffd240596bbcd5be28bab8d4f6404a6f86c/bcbio-gff-0.6.4.tar.gz"
+
+LICENSE="HPND" # same as biopython
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+IUSE=""
+
+DEPEND=""
+RDEPEND="${DEPEND}"

diff --git a/dev-python/bcbio-gff/metadata.xml b/dev-python/bcbio-gff/metadata.xml
new file mode 100644
index 000000000..f68a1b6fa
--- /dev/null
+++ b/dev-python/bcbio-gff/metadata.xml
@@ -0,0 +1,12 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+  <maintainer type="person">
+    <email>mmokrejs@fold.natur.cuni.cz</email>
+    <name>Martin Mokrejs</name>
+  </maintainer>
+  <maintainer type="project">
+    <email>sci-biology@gentoo.org</email>
+    <name>Gentoo Biology Project</name>
+  </maintainer>
+</pkgmetadata>

[gentoo-commits] proj/sci:master commit in: dev-python/bcbio-gff/

[Horea Christian]

commit:     28ce7753b360f6857f1d373c3befab890c7a7811
Author:     Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
AuthorDate: Sat Jan  2 12:20:35 2021 +0000
Commit:     Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Sun Jan  3 04:29:58 2021 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=28ce7753

dev-python/bcbio-gff: version bump, bump py targets

Package-Manager: Portage-3.0.12, Repoman-3.0.2
Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> riseup.net>
Signed-off-by: Horea Christian <chr <AT> chymera.eu>

 .../{bcbio-gff-0.6.4.ebuild => bcbio-gff-0.6.6.ebuild}      | 13 ++++++-------
 1 file changed, 6 insertions(+), 7 deletions(-)

diff --git a/dev-python/bcbio-gff/bcbio-gff-0.6.4.ebuild b/dev-python/bcbio-gff/bcbio-gff-0.6.6.ebuild
similarity index 52%
rename from dev-python/bcbio-gff/bcbio-gff-0.6.4.ebuild
rename to dev-python/bcbio-gff/bcbio-gff-0.6.6.ebuild
index 8cebbe010..73f412971 100644
--- a/dev-python/bcbio-gff/bcbio-gff-0.6.4.ebuild
+++ b/dev-python/bcbio-gff/bcbio-gff-0.6.6.ebuild
@@ -1,19 +1,18 @@
-# Copyright 1999-2017 Gentoo Foundation
+# Copyright 1999-2021 Gentoo Authors
 # Distributed under the terms of the GNU General Public License v2
 
-EAPI=6
+EAPI=7
+
+PYTHON_COMPAT=( python3_{7,8,9} )
 
-PYTHON_COMPAT=( python2_7 python3_5 )
 inherit distutils-r1
 
 DESCRIPTION="Read and write Generic Feature Format (GFF) with Biopython"
 HOMEPAGE="https://pypi.python.org/pypi/bcbio-gff"
-SRC_URI="https://pypi.python.org/packages/94/df/e2d75cc688ac6eb53f5fb4e2cffd240596bbcd5be28bab8d4f6404a6f86c/bcbio-gff-0.6.4.tar.gz"
+SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz"
 
 LICENSE="HPND" # same as biopython
 SLOT="0"
 KEYWORDS="~amd64 ~x86"
-IUSE=""
 
-DEPEND=""
-RDEPEND="${DEPEND}"
+RDEPEND="dev-python/six[${PYTHON_USEDEP}]"