* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/procheck/
@ 2017-04-24 13:31 Agostino Sarubbo
0 siblings, 0 replies; 7+ messages in thread
From: Agostino Sarubbo @ 2017-04-24 13:31 UTC (permalink / raw
To: gentoo-commits
commit: c3a3351563711c9089b0537aff1f5f34ab6b95db
Author: Agostino Sarubbo <ago <AT> gentoo <DOT> org>
AuthorDate: Mon Apr 24 13:31:42 2017 +0000
Commit: Agostino Sarubbo <ago <AT> gentoo <DOT> org>
CommitDate: Mon Apr 24 13:31:42 2017 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=c3a33515
sci-chemistry/procheck: amd64 stable wrt bug #615536
Package-Manager: Portage-2.3.3, Repoman-2.3.1
RepoMan-Options: --include-arches="amd64"
Signed-off-by: Agostino Sarubbo <ago <AT> gentoo.org>
sci-chemistry/procheck/procheck-3.5.4-r3.ebuild | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/sci-chemistry/procheck/procheck-3.5.4-r3.ebuild b/sci-chemistry/procheck/procheck-3.5.4-r3.ebuild
index 585c9b591d9..b6078e122b6 100644
--- a/sci-chemistry/procheck/procheck-3.5.4-r3.ebuild
+++ b/sci-chemistry/procheck/procheck-3.5.4-r3.ebuild
@@ -13,7 +13,7 @@ SRC_URI="
LICENSE="procheck"
SLOT="0"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
+KEYWORDS="amd64 ~x86 ~amd64-linux ~x86-linux"
IUSE="doc"
RDEPEND="app-shells/tcsh"
^ permalink raw reply related [flat|nested] 7+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/procheck/
@ 2017-04-27 10:36 Agostino Sarubbo
0 siblings, 0 replies; 7+ messages in thread
From: Agostino Sarubbo @ 2017-04-27 10:36 UTC (permalink / raw
To: gentoo-commits
commit: b3bd623f2bdf411078a842fbcb93806c404edfa1
Author: Agostino Sarubbo <ago <AT> gentoo <DOT> org>
AuthorDate: Thu Apr 27 10:35:11 2017 +0000
Commit: Agostino Sarubbo <ago <AT> gentoo <DOT> org>
CommitDate: Thu Apr 27 10:35:11 2017 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=b3bd623f
sci-chemistry/procheck: x86 stable wrt bug #615536
Package-Manager: Portage-2.3.3, Repoman-2.3.1
RepoMan-Options: --include-arches="x86"
Signed-off-by: Agostino Sarubbo <ago <AT> gentoo.org>
sci-chemistry/procheck/procheck-3.5.4-r3.ebuild | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/sci-chemistry/procheck/procheck-3.5.4-r3.ebuild b/sci-chemistry/procheck/procheck-3.5.4-r3.ebuild
index b6078e122b6..4b188e5a982 100644
--- a/sci-chemistry/procheck/procheck-3.5.4-r3.ebuild
+++ b/sci-chemistry/procheck/procheck-3.5.4-r3.ebuild
@@ -13,7 +13,7 @@ SRC_URI="
LICENSE="procheck"
SLOT="0"
-KEYWORDS="amd64 ~x86 ~amd64-linux ~x86-linux"
+KEYWORDS="amd64 x86 ~amd64-linux ~x86-linux"
IUSE="doc"
RDEPEND="app-shells/tcsh"
^ permalink raw reply related [flat|nested] 7+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/procheck/
@ 2017-04-29 18:49 Justin Lecher
0 siblings, 0 replies; 7+ messages in thread
From: Justin Lecher @ 2017-04-29 18:49 UTC (permalink / raw
To: gentoo-commits
commit: 5a75133ead1e97dbb1ff7853a5fdb23c146f4af2
Author: Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Sat Apr 29 18:34:04 2017 +0000
Commit: Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Sat Apr 29 18:49:14 2017 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=5a75133e
sci-chemistry/procheck: Drop old
Package-Manager: Portage-2.3.5, Repoman-2.3.2
Signed-off-by: Justin Lecher <jlec <AT> gentoo.org>
sci-chemistry/procheck/procheck-3.5.4-r1.ebuild | 86 -------------------------
1 file changed, 86 deletions(-)
diff --git a/sci-chemistry/procheck/procheck-3.5.4-r1.ebuild b/sci-chemistry/procheck/procheck-3.5.4-r1.ebuild
deleted file mode 100644
index c93ea1996d6..00000000000
--- a/sci-chemistry/procheck/procheck-3.5.4-r1.ebuild
+++ /dev/null
@@ -1,86 +0,0 @@
-# Copyright 1999-2017 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=4
-
-inherit eutils fortran-2 multilib toolchain-funcs versionator
-
-DESCRIPTION="Checks the stereochemical quality of a protein structure"
-HOMEPAGE="http://www.biochem.ucl.ac.uk/~roman/procheck/procheck.html"
-SRC_URI="
- ${P}.tar.gz ${P}-README
- doc? ( ${P}-manual.tar.gz )"
-
-LICENSE="procheck"
-SLOT="0"
-KEYWORDS="amd64 x86 ~amd64-linux ~x86-linux"
-IUSE="doc"
-
-RDEPEND="app-shells/tcsh"
-DEPEND="${RDEPEND}"
-
-RESTRICT="fetch"
-
-S="${WORKDIR}/${PN}"
-
-pkg_nofetch() {
- elog "Please visit http://www.ebi.ac.uk/thornton-srv/software/PROCHECK/download.html"
- elog "And follow the instruction for downloading."
- elog "Files should be stored in following way"
- elog "${PN}.tar.gz -> ${DISTDIR}/${P}.tar.gz"
- elog "README -> ${DISTDIR}/${P}-README"
- if use doc; then
- elog "manual.tar.gz -> ${DISTDIR}/${P}-manual.tar.gz"
- fi
-}
-
-src_prepare() {
- epatch "${FILESDIR}"/${P}-ldflags.patch
-}
-
-src_compile() {
- emake \
- F77=$(tc-getFC) \
- CC=$(tc-getCC) \
- COPTS="${CFLAGS}" \
- FOPTS="${FFLAGS}"
-}
-
-src_install() {
- for i in *.scr; do
- newbin ${i} ${i%.scr}
- done
-
- exeinto /usr/$(get_libdir)/${PN}/
- doexe \
- anglen \
- clean \
- rmsdev \
- secstr \
- gfac2pdb \
- pplot \
- bplot \
- tplot \
- mplot \
- vplot \
- viol2pdb \
- wirplot \
- nb
- dodoc "${DISTDIR}"/${P}-README
-
- insinto /usr/$(get_libdir)/${PN}/
- doins *.dat *.prm
- newins resdefs.dat resdefs.data
-
- cat >> "${T}"/30${PN} <<- EOF
- prodir="${EPREFIX}/usr/$(get_libdir)/${PN}/"
- EOF
-
- doenvd "${T}"/30${PN}
-
- if use doc; then
- pushd "${WORKDIR}"
- dohtml -r manual
- popd
- fi
-}
^ permalink raw reply related [flat|nested] 7+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/procheck/
@ 2017-12-18 14:03 Justin Lecher
0 siblings, 0 replies; 7+ messages in thread
From: Justin Lecher @ 2017-12-18 14:03 UTC (permalink / raw
To: gentoo-commits
commit: 3d391ea9df6f9fd2c3dd709da16f4c32647a59d7
Author: Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Sun Dec 17 19:35:16 2017 +0000
Commit: Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Mon Dec 18 14:03:47 2017 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=3d391ea9
sci-chemistry/procheck: Update to latest hashing algos
Signed-off-by: Justin Lecher <jlec <AT> gentoo.org>
Package-Manager: Portage-2.3.19, Repoman-2.3.6
sci-chemistry/procheck/Manifest | 6 +++---
1 file changed, 3 insertions(+), 3 deletions(-)
diff --git a/sci-chemistry/procheck/Manifest b/sci-chemistry/procheck/Manifest
index 2a1321949b7..48f2a0e21fd 100644
--- a/sci-chemistry/procheck/Manifest
+++ b/sci-chemistry/procheck/Manifest
@@ -1,3 +1,3 @@
-DIST procheck-3.5.4-README 6585 SHA256 202d5b4d9ffaebdad19c368e6e6fd8ab54744c511609b1c609ef46c21fa0ffa0 SHA512 c6eff94cef9b67fd61884e88fa77ec381553d4dba53f477023738e1e44a6191c4241b14543ee7ecb93b049f16f262db2a09cf5d1a63248057633aab290f1f82a WHIRLPOOL 53a618978a9285e8a8f09c7ebd3e34951a8c1056c0894c1f4e4c11f73ad3127829322c9c7597fc6dea98f1fa4c40552e6caf383eed15aaeef0594cf93887d196
-DIST procheck-3.5.4-manual.tar.gz 517840 SHA256 3c2faa505be05102ccbe23473abdddc1cd4dc87c6b5e74222b7ea5c27b18db5a SHA512 0fa9c7d50b7ca43c626d5261c524166938d3a92be1d02221721bc7ce7e91ac4919e7200b946ce563f9bb696d7dab9588c1d1b31a4d551cafa2f2bce4931a212c WHIRLPOOL 591afad0a534762d654779722b229e3dcb9cc1ed0f9216c443d4872dd7379257638e5cf3ee5844adf15b2ec55d5c5b15ab585ae52ae993678311985642aa8eaf
-DIST procheck-3.5.4.tar.gz 522013 SHA256 4923fe5a7b86d5369fd639d0c77cfb866e574f076ec8c52424d746e843a404f4 SHA512 1dd78b53070484fbcdca51001fd147ab13fd5e51b3d1da54fd529531917c31012393751ee514f0c79d579b17a1701dde04f81b1c9ac27b2b835a43fa96785ecc WHIRLPOOL 2732981bdbb5269567019a645b401009bd48d782ab20b4f68bd213a90f7248a9fa3f46ab3a026aa0515a677a99826040d4c3f5464816ed4390b5091a6a98b375
+DIST procheck-3.5.4-README 6585 BLAKE2B c61606848f30728b67d2ab51e0beadec1c30aaa0ca65a68834bff3ed3e3f466e34a0e4b64323e80cce9cee83854650ebe0805abf0509c0a9154bf08e3e0a2d6b SHA512 c6eff94cef9b67fd61884e88fa77ec381553d4dba53f477023738e1e44a6191c4241b14543ee7ecb93b049f16f262db2a09cf5d1a63248057633aab290f1f82a
+DIST procheck-3.5.4-manual.tar.gz 517840 BLAKE2B 33c5da5888bcd263e900cf2839f9287373e032fdde234e0375af061ec1c588d1ea5d2718da2a050da8060ba4003748a8fef3ff35b22f424c1cf6a1892aec0fe6 SHA512 0fa9c7d50b7ca43c626d5261c524166938d3a92be1d02221721bc7ce7e91ac4919e7200b946ce563f9bb696d7dab9588c1d1b31a4d551cafa2f2bce4931a212c
+DIST procheck-3.5.4.tar.gz 522013 BLAKE2B be6764bc741ec3f868aee349fc7e23608c612758029d0b745c421f40b47c896dd48de84ee7df6d09a64a20695bd5a1ed0a96464e6dcaf44de03da1ae231787f8 SHA512 1dd78b53070484fbcdca51001fd147ab13fd5e51b3d1da54fd529531917c31012393751ee514f0c79d579b17a1701dde04f81b1c9ac27b2b835a43fa96785ecc
^ permalink raw reply related [flat|nested] 7+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/procheck/
@ 2019-02-05 18:46 Ben Kohler
0 siblings, 0 replies; 7+ messages in thread
From: Ben Kohler @ 2019-02-05 18:46 UTC (permalink / raw
To: gentoo-commits
commit: cfb4772fe187284c4a855161395dccd0db41e999
Author: Ben Kohler <bkohler <AT> gentoo <DOT> org>
AuthorDate: Tue Feb 5 18:34:15 2019 +0000
Commit: Ben Kohler <bkohler <AT> gentoo <DOT> org>
CommitDate: Tue Feb 5 18:45:09 2019 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=cfb4772f
sci-chemistry/procheck: don't reference ${DISTDIR} in pkg_nofetch
Package-Manager: Portage-2.3.59, Repoman-2.3.12
Signed-off-by: Ben Kohler <bkohler <AT> gentoo.org>
sci-chemistry/procheck/procheck-3.5.4-r3.ebuild | 13 +++++++------
1 file changed, 7 insertions(+), 6 deletions(-)
diff --git a/sci-chemistry/procheck/procheck-3.5.4-r3.ebuild b/sci-chemistry/procheck/procheck-3.5.4-r3.ebuild
index 4b188e5a982..cc536d671b8 100644
--- a/sci-chemistry/procheck/procheck-3.5.4-r3.ebuild
+++ b/sci-chemistry/procheck/procheck-3.5.4-r3.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2017 Gentoo Foundation
+# Copyright 1999-2019 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=6
@@ -25,11 +25,12 @@ S="${WORKDIR}/${PN}"
pkg_nofetch() {
elog "Please visit http://www.ebi.ac.uk/thornton-srv/software/PROCHECK/download.html"
- elog "And follow the instruction for downloading."
- elog "Files should be stored in following way"
- elog "${PN}.tar.gz -> ${DISTDIR}/${P}.tar.gz"
- elog "README -> ${DISTDIR}/${P}-README"
- use doc && elog "manual.tar.gz -> ${DISTDIR}/${P}-manual.tar.gz"
+ elog "and follow the instruction for downloading."
+ elog "Files should be renamed in the following way before being copied to your"
+ elog "DISTDIR directory:"
+ elog " ${PN}.tar.gz -> ${P}.tar.gz"
+ elog " README -> ${P}-README"
+ use doc && elog " manual.tar.gz -> ${P}-manual.tar.gz"
}
PATCHES=(
^ permalink raw reply related [flat|nested] 7+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/procheck/
@ 2020-11-21 21:22 David Seifert
0 siblings, 0 replies; 7+ messages in thread
From: David Seifert @ 2020-11-21 21:22 UTC (permalink / raw
To: gentoo-commits
commit: 1e12ed2024d17b9dfae07efdcc1b179445d31650
Author: Jakov Smolic <jakov.smolic <AT> sartura <DOT> hr>
AuthorDate: Sat Nov 21 21:21:11 2020 +0000
Commit: David Seifert <soap <AT> gentoo <DOT> org>
CommitDate: Sat Nov 21 21:21:11 2020 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=1e12ed20
sci-chemistry/procheck: update HOMEPAGE
Closes: https://bugs.gentoo.org/680404
Package-Manager: Portage-3.0.8, Repoman-3.0.1
Signed-off-by: Jakov Smolic <jakov.smolic <AT> sartura.hr>
Signed-off-by: David Seifert <soap <AT> gentoo.org>
sci-chemistry/procheck/procheck-3.5.4-r3.ebuild | 6 +++---
1 file changed, 3 insertions(+), 3 deletions(-)
diff --git a/sci-chemistry/procheck/procheck-3.5.4-r3.ebuild b/sci-chemistry/procheck/procheck-3.5.4-r3.ebuild
index cc536d671b8..1a700ee4110 100644
--- a/sci-chemistry/procheck/procheck-3.5.4-r3.ebuild
+++ b/sci-chemistry/procheck/procheck-3.5.4-r3.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2019 Gentoo Authors
+# Copyright 1999-2020 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=6
@@ -6,7 +6,7 @@ EAPI=6
inherit fortran-2 multilib toolchain-funcs versionator
DESCRIPTION="Checks the stereochemical quality of a protein structure"
-HOMEPAGE="http://www.biochem.ucl.ac.uk/~roman/procheck/procheck.html"
+HOMEPAGE="https://www.ebi.ac.uk/thornton-srv/software/PROCHECK"
SRC_URI="
${P}.tar.gz ${P}-README
doc? ( ${P}-manual.tar.gz )"
@@ -24,7 +24,7 @@ RESTRICT="fetch"
S="${WORKDIR}/${PN}"
pkg_nofetch() {
- elog "Please visit http://www.ebi.ac.uk/thornton-srv/software/PROCHECK/download.html"
+ elog "Please visit https://www.ebi.ac.uk/thornton-srv/software/PROCHECK/download.html"
elog "and follow the instruction for downloading."
elog "Files should be renamed in the following way before being copied to your"
elog "DISTDIR directory:"
^ permalink raw reply related [flat|nested] 7+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/procheck/
@ 2022-03-20 18:51 Sam James
0 siblings, 0 replies; 7+ messages in thread
From: Sam James @ 2022-03-20 18:51 UTC (permalink / raw
To: gentoo-commits
commit: 288b7fd3ad17a357dfeeaf9ab7d6e99e82f9ebce
Author: Sam James <sam <AT> gentoo <DOT> org>
AuthorDate: Sun Mar 20 18:49:57 2022 +0000
Commit: Sam James <sam <AT> gentoo <DOT> org>
CommitDate: Sun Mar 20 18:51:10 2022 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=288b7fd3
sci-chemistry/procheck: [QA] fix tc-get* quoting
This can cause build problems for e.g. 32-bit (gcc -m32 ...)
Signed-off-by: Sam James <sam <AT> gentoo.org>
sci-chemistry/procheck/procheck-3.5.4-r3.ebuild | 6 +++---
1 file changed, 3 insertions(+), 3 deletions(-)
diff --git a/sci-chemistry/procheck/procheck-3.5.4-r3.ebuild b/sci-chemistry/procheck/procheck-3.5.4-r3.ebuild
index 1a700ee4110f..d7522b14f7c4 100644
--- a/sci-chemistry/procheck/procheck-3.5.4-r3.ebuild
+++ b/sci-chemistry/procheck/procheck-3.5.4-r3.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2020 Gentoo Authors
+# Copyright 1999-2022 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=6
@@ -40,8 +40,8 @@ PATCHES=(
src_compile() {
emake \
- F77=$(tc-getFC) \
- CC=$(tc-getCC) \
+ F77="$(tc-getFC)" \
+ CC="$(tc-getCC)" \
COPTS="${CFLAGS}" \
FOPTS="${FFLAGS} -std=legacy"
}
^ permalink raw reply related [flat|nested] 7+ messages in thread
end of thread, other threads:[~2022-03-20 18:51 UTC | newest]
Thread overview: 7+ messages (download: mbox.gz follow: Atom feed
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2019-02-05 18:46 Ben Kohler
2017-12-18 14:03 Justin Lecher
2017-04-29 18:49 Justin Lecher
2017-04-27 10:36 Agostino Sarubbo
2017-04-24 13:31 Agostino Sarubbo
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