[gentoo-commits] proj/sci:master commit in: sci-libs/libmaus/

[gentoo-commits] proj/sci:master commit in: sci-libs/libmaus/

[Justin Lecher]

commit:     81d062a2e94b3d82f77d93f3622ba56e65b256fc
Author:     mschubert <mschu.dev <AT> gmail <DOT> com>
AuthorDate: Sat Dec 20 20:22:52 2014 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Sat Dec 20 20:22:52 2014 +0000
URL:        http://sources.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=81d062a2

fix libmaus herd to sci-biology

---
 sci-libs/libmaus/metadata.xml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/sci-libs/libmaus/metadata.xml b/sci-libs/libmaus/metadata.xml
index 3d92636..72461eb 100644
--- a/sci-libs/libmaus/metadata.xml
+++ b/sci-libs/libmaus/metadata.xml
@@ -1,7 +1,7 @@
 <?xml version="1.0" encoding="UTF-8"?>
 <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
 <pkgmetadata>
-<herd>sci-libs</herd>
+<herd>sci-biology</herd>
 <longdescription lang="en">
 libmaus is a collection of data structures and algorithms. It contains
 

[gentoo-commits] proj/sci:master commit in: sci-libs/libmaus/

[Justin Lecher]

commit:     0389f56505ddad6eddb920911de5d215103406dd
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Fri Jun  5 11:17:52 2015 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Fri Jun  5 11:17:52 2015 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=0389f565

sci-libs/libmaus: Add github to remote-id in metadata.xml

Package-Manager: portage-2.2.20

 sci-libs/libmaus/ChangeLog    | 6 ++++++
 sci-libs/libmaus/metadata.xml | 7 +++++--
 2 files changed, 11 insertions(+), 2 deletions(-)

diff --git a/sci-libs/libmaus/ChangeLog b/sci-libs/libmaus/ChangeLog
new file mode 100644
index 0000000..57677bc
--- /dev/null
+++ b/sci-libs/libmaus/ChangeLog
@@ -0,0 +1,6 @@
+# ChangeLog for sci-libs/libmaus
+# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
+# $Header: $
+
+  05 Jun 2015; Justin Lecher <jlec@gentoo.org> metadata.xml:
+  sci-libs/libmaus: Add github to remote-id in metadata.xml

diff --git a/sci-libs/libmaus/metadata.xml b/sci-libs/libmaus/metadata.xml
index 72461eb..c0feca3 100644
--- a/sci-libs/libmaus/metadata.xml
+++ b/sci-libs/libmaus/metadata.xml
@@ -1,8 +1,8 @@
 <?xml version="1.0" encoding="UTF-8"?>
 <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
 <pkgmetadata>
-<herd>sci-biology</herd>
-<longdescription lang="en">
+  <herd>sci-biology</herd>
+  <longdescription lang="en">
 libmaus is a collection of data structures and algorithms. It contains
 
 I/O classes (single byte and UTF-8)
@@ -11,4 +11,7 @@ I/O classes (single byte and UTF-8)
 	BAM sequence alignment files input/output (simple and collating)
 	and many lower level support classes.
 </longdescription>
+  <upstream>
+    <remote-id type="github">gt1/libmaus</remote-id>
+  </upstream>
 </pkgmetadata>

[gentoo-commits] proj/sci:master commit in: sci-libs/libmaus/

[Justin Lecher]

commit:     4280fa0a9f111cf3e528fdc1ab99f7d9f174d153
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Fri Jul  7 06:48:57 2017 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Fri Jul  7 06:48:57 2017 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=4280fa0a

sci-libs/libmaus: Bump to EAPI 6

Package-Manager: Portage-2.3.6-prefix, Repoman-2.3.2
Signed-off-by: Justin Lecher <jlec <AT> gentoo.org>

 sci-libs/libmaus/libmaus-0.0.185.ebuild | 4 ++--
 sci-libs/libmaus/metadata.xml           | 2 +-
 2 files changed, 3 insertions(+), 3 deletions(-)

diff --git a/sci-libs/libmaus/libmaus-0.0.185.ebuild b/sci-libs/libmaus/libmaus-0.0.185.ebuild
index de938ecc0..cac8548c2 100644
--- a/sci-libs/libmaus/libmaus-0.0.185.ebuild
+++ b/sci-libs/libmaus/libmaus-0.0.185.ebuild
@@ -1,7 +1,7 @@
-# Copyright 1999-2014 Gentoo Foundation
+# Copyright 1999-2017 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
 
-EAPI=5
+EAPI=6
 
 FULLVER=${PV}-release-20141201090944
 

diff --git a/sci-libs/libmaus/metadata.xml b/sci-libs/libmaus/metadata.xml
index daa058d7d..417405dfb 100644
--- a/sci-libs/libmaus/metadata.xml
+++ b/sci-libs/libmaus/metadata.xml
@@ -1,4 +1,4 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
 <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
 <pkgmetadata>
   <maintainer type="project">

[gentoo-commits] proj/sci:master commit in: sci-libs/libmaus/

[Horea Christian]

commit:     8a594858b874feda82a2aee06885ef7299367f27
Author:     Horea Christian <chr <AT> chymera <DOT> eu>
AuthorDate: Mon Sep 28 05:59:40 2020 +0000
Commit:     Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Mon Sep 28 05:59:40 2020 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=8a594858

sci-libs/libmaus: removed discontinued package

Package-Manager: Portage-3.0.8, Repoman-3.0.1
Signed-off-by: Horea Christian <chr <AT> chymera.eu>

 sci-libs/libmaus/libmaus-0.0.185.ebuild | 17 -----------------
 sci-libs/libmaus/metadata.xml           | 20 --------------------
 2 files changed, 37 deletions(-)

diff --git a/sci-libs/libmaus/libmaus-0.0.185.ebuild b/sci-libs/libmaus/libmaus-0.0.185.ebuild
deleted file mode 100644
index cac8548c2..000000000
--- a/sci-libs/libmaus/libmaus-0.0.185.ebuild
+++ /dev/null
@@ -1,17 +0,0 @@
-# Copyright 1999-2017 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=6
-
-FULLVER=${PV}-release-20141201090944
-
-DESCRIPTION="Library for biobambam"
-HOMEPAGE="https://github.com/gt1/libmaus"
-SRC_URI="https://github.com/gt1/libmaus/archive/${FULLVER}.tar.gz"
-
-LICENSE="GPL-3"
-SLOT="0"
-KEYWORDS="~x86"
-IUSE=""
-
-S="${WORKDIR}"/${PN}-${FULLVER}

diff --git a/sci-libs/libmaus/metadata.xml b/sci-libs/libmaus/metadata.xml
deleted file mode 100644
index 80f68639f..000000000
--- a/sci-libs/libmaus/metadata.xml
+++ /dev/null
@@ -1,20 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-	<maintainer type="project">
-		<email>sci-biology@gentoo.org</email>
-		<name>Gentoo Biology Project</name>
-	</maintainer>
-	<longdescription lang="en">
-libmaus is a collection of data structures and algorithms. It contains
-
-I/O classes (single byte and UTF-8)
-bitio classes (input, output and various forms of bit level manipulation)
-text indexing classes (suffix and LCP array, fulltext and minute (FM), ...)
-BAM sequence alignment files input/output (simple and collating)
-and many lower level support classes.
-</longdescription>
-	<upstream>
-		<remote-id type="github">gt1/libmaus</remote-id>
-	</upstream>
-</pkgmetadata>