* [gentoo-commits] proj/sci:master commit in: dev-python/persim/
@ 2020-09-24 14:10 Aisha Tammy
0 siblings, 0 replies; 13+ messages in thread
From: Aisha Tammy @ 2020-09-24 14:10 UTC (permalink / raw
To: gentoo-commits
commit: efae89049c2fe55426ac6a7cd761d458fa8e0d22
Author: Aisha Tammy <gentoo <AT> aisha <DOT> cc>
AuthorDate: Thu Sep 24 14:10:09 2020 +0000
Commit: Aisha Tammy <gentoo <AT> aisha <DOT> cc>
CommitDate: Thu Sep 24 14:10:09 2020 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=efae8904
dev-python/persim: persistence diagram tools
Package-Manager: Portage-3.0.8, Repoman-3.0.1
Signed-off-by: Aisha Tammy <gentoo <AT> aisha.cc>
dev-python/persim/metadata.xml | 12 ++++++++++++
dev-python/persim/persim-0.1.3.ebuild | 23 +++++++++++++++++++++++
2 files changed, 35 insertions(+)
diff --git a/dev-python/persim/metadata.xml b/dev-python/persim/metadata.xml
new file mode 100644
index 000000000..cfbacced2
--- /dev/null
+++ b/dev-python/persim/metadata.xml
@@ -0,0 +1,12 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+ <maintainer type="person">
+ <email>gentoo@aisha.cc</email>
+ <name>Aisha Tammy</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>proxy-maint@gentoo.org</email>
+ <name>Proxy Maintainers</name>
+ </maintainer>
+</pkgmetadata>
diff --git a/dev-python/persim/persim-0.1.3.ebuild b/dev-python/persim/persim-0.1.3.ebuild
new file mode 100644
index 000000000..b64ac9d90
--- /dev/null
+++ b/dev-python/persim/persim-0.1.3.ebuild
@@ -0,0 +1,23 @@
+# Copyright 1999-2020 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+
+PYTHON_COMPAT=( python3_{6..7} )
+
+inherit distutils-r1
+
+DESCRIPTION="Distances and representations of persistence diagrams"
+HOMEPAGE="https://persim.scikit-tda.org/"
+SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz"
+
+LICENSE="MIT"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+
+RDEPEND="${PYTHON_DEPS}
+ dev-python/numpy[${PYTHON_USEDEP}]
+ dev-python/plotly[${PYTHON_USEDEP}]
+ dev-python/scipy[${PYTHON_USEDEP}]
+ sci-libs/scikits_learn[${PYTHON_USEDEP}]
+"
^ permalink raw reply related [flat|nested] 13+ messages in thread
* [gentoo-commits] proj/sci:master commit in: dev-python/persim/
@ 2020-09-27 23:02 Aisha Tammy
0 siblings, 0 replies; 13+ messages in thread
From: Aisha Tammy @ 2020-09-27 23:02 UTC (permalink / raw
To: gentoo-commits
commit: 0cd9c150784821102674c7aebaf90c01a038f3d8
Author: Aisha Tammy <gentoo <AT> aisha <DOT> cc>
AuthorDate: Sun Sep 27 22:46:57 2020 +0000
Commit: Aisha Tammy <gentoo <AT> aisha <DOT> cc>
CommitDate: Sun Sep 27 23:02:00 2020 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=0cd9c150
dev-python/persim: enable tests
Package-Manager: Portage-3.0.8, Repoman-3.0.1
Signed-off-by: Aisha Tammy <gentoo <AT> aisha.cc>
dev-python/persim/persim-0.1.3.ebuild | 4 ++++
1 file changed, 4 insertions(+)
diff --git a/dev-python/persim/persim-0.1.3.ebuild b/dev-python/persim/persim-0.1.3.ebuild
index b64ac9d90..c078bf724 100644
--- a/dev-python/persim/persim-0.1.3.ebuild
+++ b/dev-python/persim/persim-0.1.3.ebuild
@@ -3,6 +3,7 @@
EAPI=7
+# bump on plotly bump merge
PYTHON_COMPAT=( python3_{6..7} )
inherit distutils-r1
@@ -16,8 +17,11 @@ SLOT="0"
KEYWORDS="~amd64 ~x86"
RDEPEND="${PYTHON_DEPS}
+ dev-python/hopcroftkarp[${PYTHON_USEDEP}]
dev-python/numpy[${PYTHON_USEDEP}]
dev-python/plotly[${PYTHON_USEDEP}]
dev-python/scipy[${PYTHON_USEDEP}]
sci-libs/scikits_learn[${PYTHON_USEDEP}]
"
+
+distutils_enable_tests pytest
^ permalink raw reply related [flat|nested] 13+ messages in thread
* [gentoo-commits] proj/sci:master commit in: dev-python/persim/
@ 2020-12-23 5:10 Aisha Tammy
0 siblings, 0 replies; 13+ messages in thread
From: Aisha Tammy @ 2020-12-23 5:10 UTC (permalink / raw
To: gentoo-commits
commit: c52d8c2a720ab4cdba9945063e86daa6b09d7ef5
Author: Aisha Tammy <gentoo <AT> aisha <DOT> cc>
AuthorDate: Wed Dec 23 04:38:49 2020 +0000
Commit: Aisha Tammy <gentoo <AT> aisha <DOT> cc>
CommitDate: Wed Dec 23 04:38:49 2020 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=c52d8c2a
dev-python/persim: add python3_{8,9}
Package-Manager: Portage-3.0.12, Repoman-3.0.2
Signed-off-by: Aisha Tammy <gentoo <AT> aisha.cc>
dev-python/persim/persim-0.1.3.ebuild | 3 +--
1 file changed, 1 insertion(+), 2 deletions(-)
diff --git a/dev-python/persim/persim-0.1.3.ebuild b/dev-python/persim/persim-0.1.3.ebuild
index 714796631..d86f5068b 100644
--- a/dev-python/persim/persim-0.1.3.ebuild
+++ b/dev-python/persim/persim-0.1.3.ebuild
@@ -3,8 +3,7 @@
EAPI=7
-# bump on plotly bump merge
-PYTHON_COMPAT=( python3_{6..7} )
+PYTHON_COMPAT=( python3_{6..9} )
inherit distutils-r1
^ permalink raw reply related [flat|nested] 13+ messages in thread
* [gentoo-commits] proj/sci:master commit in: dev-python/persim/
@ 2021-01-19 2:20 Aisha Tammy
0 siblings, 0 replies; 13+ messages in thread
From: Aisha Tammy @ 2021-01-19 2:20 UTC (permalink / raw
To: gentoo-commits
commit: 73993d2a4dca4bf4a902838c463adf6bb11ed1da
Author: Aisha Tammy <gentoo <AT> aisha <DOT> cc>
AuthorDate: Tue Jan 19 02:20:42 2021 +0000
Commit: Aisha Tammy <gentoo <AT> aisha <DOT> cc>
CommitDate: Tue Jan 19 02:20:42 2021 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=73993d2a
dev-python/persim: version bump to 0.2.0
Package-Manager: Portage-3.0.12, Repoman-3.0.2
Signed-off-by: Aisha Tammy <gentoo <AT> aisha.cc>
dev-python/persim/persim-0.2.0.ebuild | 26 ++++++++++++++++++++++++++
1 file changed, 26 insertions(+)
diff --git a/dev-python/persim/persim-0.2.0.ebuild b/dev-python/persim/persim-0.2.0.ebuild
new file mode 100644
index 000000000..065f0eb53
--- /dev/null
+++ b/dev-python/persim/persim-0.2.0.ebuild
@@ -0,0 +1,26 @@
+# Copyright 1999-2021 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+
+PYTHON_COMPAT=( python3_{6..9} )
+
+inherit distutils-r1
+
+DESCRIPTION="Distances and representations of persistence diagrams"
+HOMEPAGE="https://persim.scikit-tda.org/"
+SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz"
+
+LICENSE="MIT"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+
+RDEPEND="${PYTHON_DEPS}
+ dev-python/hopcroftkarp[${PYTHON_USEDEP}]
+ dev-python/numpy[${PYTHON_USEDEP}]
+ dev-python/plotly[${PYTHON_USEDEP}]
+ dev-python/scipy[${PYTHON_USEDEP}]
+ sci-libs/scikit-learn[${PYTHON_USEDEP}]
+"
+
+distutils_enable_tests pytest
^ permalink raw reply related [flat|nested] 13+ messages in thread
* [gentoo-commits] proj/sci:master commit in: dev-python/persim/
@ 2021-05-20 22:15 Aisha Tammy
0 siblings, 0 replies; 13+ messages in thread
From: Aisha Tammy @ 2021-05-20 22:15 UTC (permalink / raw
To: gentoo-commits
commit: 8d7feade594163f735a9db8a7eeb9d024117a069
Author: Aisha Tammy <gentoo <AT> aisha <DOT> cc>
AuthorDate: Thu May 20 22:15:31 2021 +0000
Commit: Aisha Tammy <gentoo <AT> aisha <DOT> cc>
CommitDate: Thu May 20 22:15:31 2021 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=8d7feade
dev-python/persim: version bump to 0.3.0
Package-Manager: Portage-3.0.18, Repoman-3.0.3
Signed-off-by: Aisha Tammy <gentoo <AT> aisha.cc>
dev-python/persim/persim-0.3.0.ebuild | 27 +++++++++++++++++++++++++++
1 file changed, 27 insertions(+)
diff --git a/dev-python/persim/persim-0.3.0.ebuild b/dev-python/persim/persim-0.3.0.ebuild
new file mode 100644
index 000000000..79bdd7426
--- /dev/null
+++ b/dev-python/persim/persim-0.3.0.ebuild
@@ -0,0 +1,27 @@
+# Copyright 1999-2021 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+
+PYTHON_COMPAT=( python3_{7..9} )
+
+inherit distutils-r1
+
+DESCRIPTION="Distances and representations of persistence diagrams"
+HOMEPAGE="https://persim.scikit-tda.org/"
+SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz"
+
+LICENSE="MIT"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+
+RDEPEND="${PYTHON_DEPS}
+ dev-python/hopcroftkarp[${PYTHON_USEDEP}]
+ dev-python/numpy[${PYTHON_USEDEP}]
+ dev-python/plotly[${PYTHON_USEDEP}]
+ dev-python/scipy[${PYTHON_USEDEP}]
+ sci-libs/scikit-learn[${PYTHON_USEDEP}]
+ test? ( dev-python/deprecated[${PYTHON_USEDEP}] )
+"
+
+distutils_enable_tests pytest
^ permalink raw reply related [flat|nested] 13+ messages in thread
* [gentoo-commits] proj/sci:master commit in: dev-python/persim/
@ 2021-05-24 13:26 Aisha Tammy
0 siblings, 0 replies; 13+ messages in thread
From: Aisha Tammy @ 2021-05-24 13:26 UTC (permalink / raw
To: gentoo-commits
commit: e0a46e74f8b3bd90654facd3d715b3bac53b6b63
Author: Aisha Tammy <gentoo <AT> aisha <DOT> cc>
AuthorDate: Mon May 24 13:25:58 2021 +0000
Commit: Aisha Tammy <gentoo <AT> aisha <DOT> cc>
CommitDate: Mon May 24 13:25:58 2021 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=e0a46e74
dev-python/persim: version bump to 0.3.1
Package-Manager: Portage-3.0.18, Repoman-3.0.3
Signed-off-by: Aisha Tammy <gentoo <AT> aisha.cc>
dev-python/persim/persim-0.3.0.ebuild | 1 +
dev-python/persim/{persim-0.3.0.ebuild => persim-0.3.1.ebuild} | 1 +
2 files changed, 2 insertions(+)
diff --git a/dev-python/persim/persim-0.3.0.ebuild b/dev-python/persim/persim-0.3.0.ebuild
index 79bdd7426..5272edc3a 100644
--- a/dev-python/persim/persim-0.3.0.ebuild
+++ b/dev-python/persim/persim-0.3.0.ebuild
@@ -17,6 +17,7 @@ KEYWORDS="~amd64 ~x86"
RDEPEND="${PYTHON_DEPS}
dev-python/hopcroftkarp[${PYTHON_USEDEP}]
+ dev-python/matplotlib[${PYTHON_USEDEP}]
dev-python/numpy[${PYTHON_USEDEP}]
dev-python/plotly[${PYTHON_USEDEP}]
dev-python/scipy[${PYTHON_USEDEP}]
diff --git a/dev-python/persim/persim-0.3.0.ebuild b/dev-python/persim/persim-0.3.1.ebuild
similarity index 94%
copy from dev-python/persim/persim-0.3.0.ebuild
copy to dev-python/persim/persim-0.3.1.ebuild
index 79bdd7426..5272edc3a 100644
--- a/dev-python/persim/persim-0.3.0.ebuild
+++ b/dev-python/persim/persim-0.3.1.ebuild
@@ -17,6 +17,7 @@ KEYWORDS="~amd64 ~x86"
RDEPEND="${PYTHON_DEPS}
dev-python/hopcroftkarp[${PYTHON_USEDEP}]
+ dev-python/matplotlib[${PYTHON_USEDEP}]
dev-python/numpy[${PYTHON_USEDEP}]
dev-python/plotly[${PYTHON_USEDEP}]
dev-python/scipy[${PYTHON_USEDEP}]
^ permalink raw reply related [flat|nested] 13+ messages in thread
* [gentoo-commits] proj/sci:master commit in: dev-python/persim/
@ 2021-06-01 9:26 Andrew Ammerlaan
0 siblings, 0 replies; 13+ messages in thread
From: Andrew Ammerlaan @ 2021-06-01 9:26 UTC (permalink / raw
To: gentoo-commits
commit: 7ce4870d08f6e10112fec81f8569438989ba4731
Author: Andrew Ammerlaan <andrewammerlaan <AT> gentoo <DOT> org>
AuthorDate: Tue Jun 1 09:26:03 2021 +0000
Commit: Andrew Ammerlaan <andrewammerlaan <AT> gentoo <DOT> org>
CommitDate: Tue Jun 1 09:26:03 2021 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=7ce4870d
dev-python/persim: move test deps out of RDEPEND
Package-Manager: Portage-3.0.19, Repoman-3.0.3
Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> gentoo.org>
dev-python/persim/persim-0.3.0.ebuild | 2 +-
dev-python/persim/persim-0.3.1.ebuild | 2 +-
2 files changed, 2 insertions(+), 2 deletions(-)
diff --git a/dev-python/persim/persim-0.3.0.ebuild b/dev-python/persim/persim-0.3.0.ebuild
index 5272edc3a..6e1d989aa 100644
--- a/dev-python/persim/persim-0.3.0.ebuild
+++ b/dev-python/persim/persim-0.3.0.ebuild
@@ -22,7 +22,7 @@ RDEPEND="${PYTHON_DEPS}
dev-python/plotly[${PYTHON_USEDEP}]
dev-python/scipy[${PYTHON_USEDEP}]
sci-libs/scikit-learn[${PYTHON_USEDEP}]
- test? ( dev-python/deprecated[${PYTHON_USEDEP}] )
"
+BDEPEND="test? ( dev-python/deprecated[${PYTHON_USEDEP}] )"
distutils_enable_tests pytest
diff --git a/dev-python/persim/persim-0.3.1.ebuild b/dev-python/persim/persim-0.3.1.ebuild
index 5272edc3a..6e1d989aa 100644
--- a/dev-python/persim/persim-0.3.1.ebuild
+++ b/dev-python/persim/persim-0.3.1.ebuild
@@ -22,7 +22,7 @@ RDEPEND="${PYTHON_DEPS}
dev-python/plotly[${PYTHON_USEDEP}]
dev-python/scipy[${PYTHON_USEDEP}]
sci-libs/scikit-learn[${PYTHON_USEDEP}]
- test? ( dev-python/deprecated[${PYTHON_USEDEP}] )
"
+BDEPEND="test? ( dev-python/deprecated[${PYTHON_USEDEP}] )"
distutils_enable_tests pytest
^ permalink raw reply related [flat|nested] 13+ messages in thread
* [gentoo-commits] proj/sci:master commit in: dev-python/persim/
@ 2023-01-14 0:59 Horea Christian
0 siblings, 0 replies; 13+ messages in thread
From: Horea Christian @ 2023-01-14 0:59 UTC (permalink / raw
To: gentoo-commits
commit: c98e64ee4d444b13bd98925df167ea175ca5bef6
Author: Horea Christian <chr <AT> chymera <DOT> eu>
AuthorDate: Fri Jan 13 23:59:53 2023 +0000
Commit: Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Fri Jan 13 23:59:53 2023 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=c98e64ee
dev-python/persim: PYTHON_COMPAT update
Signed-off-by: Horea Christian <chr <AT> chymera.eu>
dev-python/persim/persim-0.1.3.ebuild | 6 +++---
dev-python/persim/persim-0.2.0.ebuild | 6 +++---
dev-python/persim/persim-0.3.0.ebuild | 6 +++---
dev-python/persim/persim-0.3.1.ebuild | 6 +++---
4 files changed, 12 insertions(+), 12 deletions(-)
diff --git a/dev-python/persim/persim-0.1.3.ebuild b/dev-python/persim/persim-0.1.3.ebuild
index 722ae4d39..11d1d990d 100644
--- a/dev-python/persim/persim-0.1.3.ebuild
+++ b/dev-python/persim/persim-0.1.3.ebuild
@@ -1,9 +1,9 @@
-# Copyright 1999-2020 Gentoo Authors
+# Copyright 1999-2023 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
-EAPI=7
+EAPI=8
-PYTHON_COMPAT=( python3_{7..9} )
+PYTHON_COMPAT=( python3_{10..10} )
inherit distutils-r1
diff --git a/dev-python/persim/persim-0.2.0.ebuild b/dev-python/persim/persim-0.2.0.ebuild
index 8ca453bf9..11d1d990d 100644
--- a/dev-python/persim/persim-0.2.0.ebuild
+++ b/dev-python/persim/persim-0.2.0.ebuild
@@ -1,9 +1,9 @@
-# Copyright 1999-2021 Gentoo Authors
+# Copyright 1999-2023 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
-EAPI=7
+EAPI=8
-PYTHON_COMPAT=( python3_{7..9} )
+PYTHON_COMPAT=( python3_{10..10} )
inherit distutils-r1
diff --git a/dev-python/persim/persim-0.3.0.ebuild b/dev-python/persim/persim-0.3.0.ebuild
index 6e1d989aa..905f8994a 100644
--- a/dev-python/persim/persim-0.3.0.ebuild
+++ b/dev-python/persim/persim-0.3.0.ebuild
@@ -1,9 +1,9 @@
-# Copyright 1999-2021 Gentoo Authors
+# Copyright 1999-2023 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
-EAPI=7
+EAPI=8
-PYTHON_COMPAT=( python3_{7..9} )
+PYTHON_COMPAT=( python3_{10..10} )
inherit distutils-r1
diff --git a/dev-python/persim/persim-0.3.1.ebuild b/dev-python/persim/persim-0.3.1.ebuild
index 6e1d989aa..905f8994a 100644
--- a/dev-python/persim/persim-0.3.1.ebuild
+++ b/dev-python/persim/persim-0.3.1.ebuild
@@ -1,9 +1,9 @@
-# Copyright 1999-2021 Gentoo Authors
+# Copyright 1999-2023 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
-EAPI=7
+EAPI=8
-PYTHON_COMPAT=( python3_{7..9} )
+PYTHON_COMPAT=( python3_{10..10} )
inherit distutils-r1
^ permalink raw reply related [flat|nested] 13+ messages in thread
* [gentoo-commits] proj/sci:master commit in: dev-python/persim/
@ 2023-01-14 10:32 Horea Christian
0 siblings, 0 replies; 13+ messages in thread
From: Horea Christian @ 2023-01-14 10:32 UTC (permalink / raw
To: gentoo-commits
commit: 9b80f3dc50b31a0a62507e04d9976b0f397144ac
Author: Horea Christian <chr <AT> chymera <DOT> eu>
AuthorDate: Sat Jan 14 10:31:04 2023 +0000
Commit: Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Sat Jan 14 10:31:04 2023 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=9b80f3dc
dev-python/persim: deselected failing tests
Signed-off-by: Horea Christian <chr <AT> chymera.eu>
dev-python/persim/persim-0.1.3.ebuild | 10 ++++++++++
dev-python/persim/persim-0.2.0.ebuild | 17 +++++++++++++++++
dev-python/persim/persim-0.3.0.ebuild | 18 ++++++++++++++++++
dev-python/persim/persim-0.3.1.ebuild | 18 ++++++++++++++++++
4 files changed, 63 insertions(+)
diff --git a/dev-python/persim/persim-0.1.3.ebuild b/dev-python/persim/persim-0.1.3.ebuild
index 11d1d990d..57d7bf8b0 100644
--- a/dev-python/persim/persim-0.1.3.ebuild
+++ b/dev-python/persim/persim-0.1.3.ebuild
@@ -24,3 +24,13 @@ RDEPEND="${PYTHON_DEPS}
"
distutils_enable_tests pytest
+
+EPYTEST_DESELECT=(
+ # Reported upsream:
+ # https://github.com/scikit-tda/persim/issues/64
+ test/test_persim.py::test_integer_diagrams
+ test/test_persim.py::TestEmpty::test_empyt_diagram_list
+ test/test_persim.py::TestTransforms::test_lists_of_lists
+ test/test_persim.py::TestTransforms::test_n_pixels
+ test/test_persim.py::TestTransforms::test_multiple_diagrams
+)
diff --git a/dev-python/persim/persim-0.2.0.ebuild b/dev-python/persim/persim-0.2.0.ebuild
index 11d1d990d..4441720c2 100644
--- a/dev-python/persim/persim-0.2.0.ebuild
+++ b/dev-python/persim/persim-0.2.0.ebuild
@@ -24,3 +24,20 @@ RDEPEND="${PYTHON_DEPS}
"
distutils_enable_tests pytest
+
+EPYTEST_DESELECT=(
+ # Reported upsream:
+ # https://github.com/scikit-tda/persim/issues/65
+ test/test_persim.py::test_integer_diagrams
+ test/test_persim.py::TestEmpty::test_empyt_diagram_list
+ test/test_persim.py::TestTransforms::test_lists_of_lists
+ test/test_persim.py::TestTransforms::test_n_pixels
+ test/test_persim.py::TestTransforms::test_multiple_diagrams
+ test/test_persistence_imager.py::test_empty_diagram_list
+ test/test_persistence_imager.py::test_fit_diagram
+ test/test_persistence_imager.py::test_fit_diagram_list
+ test/test_persistence_imager.py::test_mixed_pairs
+ test/test_persistence_imager.py::TestTransformOutput::test_lists_of_lists
+ test/test_persistence_imager.py::TestTransformOutput::test_n_pixels
+ test/test_persistence_imager.py::TestTransformOutput::test_multiple_diagrams
+)
diff --git a/dev-python/persim/persim-0.3.0.ebuild b/dev-python/persim/persim-0.3.0.ebuild
index 905f8994a..8931c509e 100644
--- a/dev-python/persim/persim-0.3.0.ebuild
+++ b/dev-python/persim/persim-0.3.0.ebuild
@@ -26,3 +26,21 @@ RDEPEND="${PYTHON_DEPS}
BDEPEND="test? ( dev-python/deprecated[${PYTHON_USEDEP}] )"
distutils_enable_tests pytest
+
+EPYTEST_DESELECT=(
+ # Reported upsream:
+ # https://github.com/scikit-tda/persim/issues/66
+ test/test_landscapes.py::TestPersLandscapeExact::test_exact_critical_pairs
+ test/test_persim.py::test_integer_diagrams
+ test/test_persim.py::TestEmpty::test_empyt_diagram_list
+ test/test_persim.py::TestTransforms::test_lists_of_lists
+ test/test_persim.py::TestTransforms::test_n_pixels
+ test/test_persim.py::TestTransforms::test_multiple_diagrams
+ test/test_persistence_imager.py::test_empty_diagram_list
+ test/test_persistence_imager.py::test_fit_diagram
+ test/test_persistence_imager.py::test_fit_diagram_list
+ test/test_persistence_imager.py::test_mixed_pairs
+ test/test_persistence_imager.py::TestTransformOutput::test_lists_of_lists
+ test/test_persistence_imager.py::TestTransformOutput::test_n_pixels
+ test/test_persistence_imager.py::TestTransformOutput::test_multiple_diagrams
+)
diff --git a/dev-python/persim/persim-0.3.1.ebuild b/dev-python/persim/persim-0.3.1.ebuild
index 905f8994a..8931c509e 100644
--- a/dev-python/persim/persim-0.3.1.ebuild
+++ b/dev-python/persim/persim-0.3.1.ebuild
@@ -26,3 +26,21 @@ RDEPEND="${PYTHON_DEPS}
BDEPEND="test? ( dev-python/deprecated[${PYTHON_USEDEP}] )"
distutils_enable_tests pytest
+
+EPYTEST_DESELECT=(
+ # Reported upsream:
+ # https://github.com/scikit-tda/persim/issues/66
+ test/test_landscapes.py::TestPersLandscapeExact::test_exact_critical_pairs
+ test/test_persim.py::test_integer_diagrams
+ test/test_persim.py::TestEmpty::test_empyt_diagram_list
+ test/test_persim.py::TestTransforms::test_lists_of_lists
+ test/test_persim.py::TestTransforms::test_n_pixels
+ test/test_persim.py::TestTransforms::test_multiple_diagrams
+ test/test_persistence_imager.py::test_empty_diagram_list
+ test/test_persistence_imager.py::test_fit_diagram
+ test/test_persistence_imager.py::test_fit_diagram_list
+ test/test_persistence_imager.py::test_mixed_pairs
+ test/test_persistence_imager.py::TestTransformOutput::test_lists_of_lists
+ test/test_persistence_imager.py::TestTransformOutput::test_n_pixels
+ test/test_persistence_imager.py::TestTransformOutput::test_multiple_diagrams
+)
^ permalink raw reply related [flat|nested] 13+ messages in thread
* [gentoo-commits] proj/sci:master commit in: dev-python/persim/
@ 2023-01-14 11:17 Horea Christian
0 siblings, 0 replies; 13+ messages in thread
From: Horea Christian @ 2023-01-14 11:17 UTC (permalink / raw
To: gentoo-commits
commit: a1d5e9795a97df5591fc52f48fa69187efb7cbce
Author: Horea Christian <chr <AT> chymera <DOT> eu>
AuthorDate: Sat Jan 14 11:16:30 2023 +0000
Commit: Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Sat Jan 14 11:16:30 2023 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=a1d5e979
dev-python/persim: using PEP517
Signed-off-by: Horea Christian <chr <AT> chymera.eu>
dev-python/persim/persim-0.1.3.ebuild | 1 +
dev-python/persim/persim-0.2.0.ebuild | 1 +
dev-python/persim/persim-0.3.0.ebuild | 1 +
dev-python/persim/persim-0.3.1.ebuild | 1 +
4 files changed, 4 insertions(+)
diff --git a/dev-python/persim/persim-0.1.3.ebuild b/dev-python/persim/persim-0.1.3.ebuild
index 57d7bf8b0..e8aad47df 100644
--- a/dev-python/persim/persim-0.1.3.ebuild
+++ b/dev-python/persim/persim-0.1.3.ebuild
@@ -4,6 +4,7 @@
EAPI=8
PYTHON_COMPAT=( python3_{10..10} )
+DISTUTILS_USE_PEP517=setuptools
inherit distutils-r1
diff --git a/dev-python/persim/persim-0.2.0.ebuild b/dev-python/persim/persim-0.2.0.ebuild
index 4441720c2..792839a0b 100644
--- a/dev-python/persim/persim-0.2.0.ebuild
+++ b/dev-python/persim/persim-0.2.0.ebuild
@@ -4,6 +4,7 @@
EAPI=8
PYTHON_COMPAT=( python3_{10..10} )
+DISTUTILS_USE_PEP517=setuptools
inherit distutils-r1
diff --git a/dev-python/persim/persim-0.3.0.ebuild b/dev-python/persim/persim-0.3.0.ebuild
index 8931c509e..91b9514ad 100644
--- a/dev-python/persim/persim-0.3.0.ebuild
+++ b/dev-python/persim/persim-0.3.0.ebuild
@@ -4,6 +4,7 @@
EAPI=8
PYTHON_COMPAT=( python3_{10..10} )
+DISTUTILS_USE_PEP517=setuptools
inherit distutils-r1
diff --git a/dev-python/persim/persim-0.3.1.ebuild b/dev-python/persim/persim-0.3.1.ebuild
index 8931c509e..91b9514ad 100644
--- a/dev-python/persim/persim-0.3.1.ebuild
+++ b/dev-python/persim/persim-0.3.1.ebuild
@@ -4,6 +4,7 @@
EAPI=8
PYTHON_COMPAT=( python3_{10..10} )
+DISTUTILS_USE_PEP517=setuptools
inherit distutils-r1
^ permalink raw reply related [flat|nested] 13+ messages in thread
* [gentoo-commits] proj/sci:master commit in: dev-python/persim/
@ 2023-02-10 13:19 Andrew Ammerlaan
0 siblings, 0 replies; 13+ messages in thread
From: Andrew Ammerlaan @ 2023-02-10 13:19 UTC (permalink / raw
To: gentoo-commits
commit: eb1fdb92b75dc1aa534d291f14d17a265598b3a6
Author: Andrew Ammerlaan <andrewammerlaan <AT> gentoo <DOT> org>
AuthorDate: Fri Feb 10 13:17:46 2023 +0000
Commit: Andrew Ammerlaan <andrewammerlaan <AT> gentoo <DOT> org>
CommitDate: Fri Feb 10 13:17:54 2023 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=eb1fdb92
dev-python/persim: enable py3.11
Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> gentoo.org>
dev-python/persim/metadata.xml | 3 +++
dev-python/persim/persim-0.3.1.ebuild | 7 +++----
2 files changed, 6 insertions(+), 4 deletions(-)
diff --git a/dev-python/persim/metadata.xml b/dev-python/persim/metadata.xml
index 2f2c0b51c..ea34f9f89 100644
--- a/dev-python/persim/metadata.xml
+++ b/dev-python/persim/metadata.xml
@@ -9,4 +9,7 @@
<email>sci@gentoo.org</email>
<name>Gentoo Science Project</name>
</maintainer>
+ <upstream>
+ <remote-id type="pypi">persim</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/persim/persim-0.3.1.ebuild b/dev-python/persim/persim-0.3.1.ebuild
index 91b9514ad..78b86d6ea 100644
--- a/dev-python/persim/persim-0.3.1.ebuild
+++ b/dev-python/persim/persim-0.3.1.ebuild
@@ -3,20 +3,19 @@
EAPI=8
-PYTHON_COMPAT=( python3_{10..10} )
+PYTHON_COMPAT=( python3_{10..11} )
DISTUTILS_USE_PEP517=setuptools
-inherit distutils-r1
+inherit distutils-r1 pypi
DESCRIPTION="Distances and representations of persistence diagrams"
HOMEPAGE="https://persim.scikit-tda.org/"
-SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz"
LICENSE="MIT"
SLOT="0"
KEYWORDS="~amd64 ~x86"
-RDEPEND="${PYTHON_DEPS}
+RDEPEND="
dev-python/hopcroftkarp[${PYTHON_USEDEP}]
dev-python/matplotlib[${PYTHON_USEDEP}]
dev-python/numpy[${PYTHON_USEDEP}]
^ permalink raw reply related [flat|nested] 13+ messages in thread
* [gentoo-commits] proj/sci:master commit in: dev-python/persim/
@ 2023-05-22 13:17 Andrew Ammerlaan
0 siblings, 0 replies; 13+ messages in thread
From: Andrew Ammerlaan @ 2023-05-22 13:17 UTC (permalink / raw
To: gentoo-commits
commit: 5fbddacd11e416bd26026fddea6ca598ec9608c6
Author: Andrew Ammerlaan <andrewammerlaan <AT> gentoo <DOT> org>
AuthorDate: Mon May 22 13:15:34 2023 +0000
Commit: Andrew Ammerlaan <andrewammerlaan <AT> gentoo <DOT> org>
CommitDate: Mon May 22 13:15:34 2023 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=5fbddacd
dev-python/persim: drop 0.1.3, 0.2.0, 0.3.0
Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> gentoo.org>
dev-python/persim/persim-0.1.3.ebuild | 37 ---------------------------
dev-python/persim/persim-0.2.0.ebuild | 44 --------------------------------
dev-python/persim/persim-0.3.0.ebuild | 47 -----------------------------------
3 files changed, 128 deletions(-)
diff --git a/dev-python/persim/persim-0.1.3.ebuild b/dev-python/persim/persim-0.1.3.ebuild
deleted file mode 100644
index e8aad47df..000000000
--- a/dev-python/persim/persim-0.1.3.ebuild
+++ /dev/null
@@ -1,37 +0,0 @@
-# Copyright 1999-2023 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=8
-
-PYTHON_COMPAT=( python3_{10..10} )
-DISTUTILS_USE_PEP517=setuptools
-
-inherit distutils-r1
-
-DESCRIPTION="Distances and representations of persistence diagrams"
-HOMEPAGE="https://persim.scikit-tda.org/"
-SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz"
-
-LICENSE="MIT"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-
-RDEPEND="${PYTHON_DEPS}
- dev-python/hopcroftkarp[${PYTHON_USEDEP}]
- dev-python/numpy[${PYTHON_USEDEP}]
- dev-python/plotly[${PYTHON_USEDEP}]
- dev-python/scipy[${PYTHON_USEDEP}]
- sci-libs/scikit-learn[${PYTHON_USEDEP}]
-"
-
-distutils_enable_tests pytest
-
-EPYTEST_DESELECT=(
- # Reported upsream:
- # https://github.com/scikit-tda/persim/issues/64
- test/test_persim.py::test_integer_diagrams
- test/test_persim.py::TestEmpty::test_empyt_diagram_list
- test/test_persim.py::TestTransforms::test_lists_of_lists
- test/test_persim.py::TestTransforms::test_n_pixels
- test/test_persim.py::TestTransforms::test_multiple_diagrams
-)
diff --git a/dev-python/persim/persim-0.2.0.ebuild b/dev-python/persim/persim-0.2.0.ebuild
deleted file mode 100644
index 792839a0b..000000000
--- a/dev-python/persim/persim-0.2.0.ebuild
+++ /dev/null
@@ -1,44 +0,0 @@
-# Copyright 1999-2023 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=8
-
-PYTHON_COMPAT=( python3_{10..10} )
-DISTUTILS_USE_PEP517=setuptools
-
-inherit distutils-r1
-
-DESCRIPTION="Distances and representations of persistence diagrams"
-HOMEPAGE="https://persim.scikit-tda.org/"
-SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz"
-
-LICENSE="MIT"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-
-RDEPEND="${PYTHON_DEPS}
- dev-python/hopcroftkarp[${PYTHON_USEDEP}]
- dev-python/numpy[${PYTHON_USEDEP}]
- dev-python/plotly[${PYTHON_USEDEP}]
- dev-python/scipy[${PYTHON_USEDEP}]
- sci-libs/scikit-learn[${PYTHON_USEDEP}]
-"
-
-distutils_enable_tests pytest
-
-EPYTEST_DESELECT=(
- # Reported upsream:
- # https://github.com/scikit-tda/persim/issues/65
- test/test_persim.py::test_integer_diagrams
- test/test_persim.py::TestEmpty::test_empyt_diagram_list
- test/test_persim.py::TestTransforms::test_lists_of_lists
- test/test_persim.py::TestTransforms::test_n_pixels
- test/test_persim.py::TestTransforms::test_multiple_diagrams
- test/test_persistence_imager.py::test_empty_diagram_list
- test/test_persistence_imager.py::test_fit_diagram
- test/test_persistence_imager.py::test_fit_diagram_list
- test/test_persistence_imager.py::test_mixed_pairs
- test/test_persistence_imager.py::TestTransformOutput::test_lists_of_lists
- test/test_persistence_imager.py::TestTransformOutput::test_n_pixels
- test/test_persistence_imager.py::TestTransformOutput::test_multiple_diagrams
-)
diff --git a/dev-python/persim/persim-0.3.0.ebuild b/dev-python/persim/persim-0.3.0.ebuild
deleted file mode 100644
index 91b9514ad..000000000
--- a/dev-python/persim/persim-0.3.0.ebuild
+++ /dev/null
@@ -1,47 +0,0 @@
-# Copyright 1999-2023 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=8
-
-PYTHON_COMPAT=( python3_{10..10} )
-DISTUTILS_USE_PEP517=setuptools
-
-inherit distutils-r1
-
-DESCRIPTION="Distances and representations of persistence diagrams"
-HOMEPAGE="https://persim.scikit-tda.org/"
-SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz"
-
-LICENSE="MIT"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-
-RDEPEND="${PYTHON_DEPS}
- dev-python/hopcroftkarp[${PYTHON_USEDEP}]
- dev-python/matplotlib[${PYTHON_USEDEP}]
- dev-python/numpy[${PYTHON_USEDEP}]
- dev-python/plotly[${PYTHON_USEDEP}]
- dev-python/scipy[${PYTHON_USEDEP}]
- sci-libs/scikit-learn[${PYTHON_USEDEP}]
-"
-BDEPEND="test? ( dev-python/deprecated[${PYTHON_USEDEP}] )"
-
-distutils_enable_tests pytest
-
-EPYTEST_DESELECT=(
- # Reported upsream:
- # https://github.com/scikit-tda/persim/issues/66
- test/test_landscapes.py::TestPersLandscapeExact::test_exact_critical_pairs
- test/test_persim.py::test_integer_diagrams
- test/test_persim.py::TestEmpty::test_empyt_diagram_list
- test/test_persim.py::TestTransforms::test_lists_of_lists
- test/test_persim.py::TestTransforms::test_n_pixels
- test/test_persim.py::TestTransforms::test_multiple_diagrams
- test/test_persistence_imager.py::test_empty_diagram_list
- test/test_persistence_imager.py::test_fit_diagram
- test/test_persistence_imager.py::test_fit_diagram_list
- test/test_persistence_imager.py::test_mixed_pairs
- test/test_persistence_imager.py::TestTransformOutput::test_lists_of_lists
- test/test_persistence_imager.py::TestTransformOutput::test_n_pixels
- test/test_persistence_imager.py::TestTransformOutput::test_multiple_diagrams
-)
^ permalink raw reply related [flat|nested] 13+ messages in thread
* [gentoo-commits] proj/sci:master commit in: dev-python/persim/
@ 2024-02-29 2:01 Horea Christian
0 siblings, 0 replies; 13+ messages in thread
From: Horea Christian @ 2024-02-29 2:01 UTC (permalink / raw
To: gentoo-commits
commit: 5da1ece965b466bed18247c3ad817756a7c7db9e
Author: Horea Christian <chr <AT> chymera <DOT> eu>
AuthorDate: Thu Feb 29 02:01:02 2024 +0000
Commit: Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Thu Feb 29 02:01:02 2024 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=5da1ece9
dev-python/persim: unkeyword 0.3.1 for ~x86
Signed-off-by: Horea Christian <chr <AT> chymera.eu>
dev-python/persim/persim-0.3.1.ebuild | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/dev-python/persim/persim-0.3.1.ebuild b/dev-python/persim/persim-0.3.1.ebuild
index 78b86d6ea..994dca206 100644
--- a/dev-python/persim/persim-0.3.1.ebuild
+++ b/dev-python/persim/persim-0.3.1.ebuild
@@ -13,7 +13,7 @@ HOMEPAGE="https://persim.scikit-tda.org/"
LICENSE="MIT"
SLOT="0"
-KEYWORDS="~amd64 ~x86"
+KEYWORDS="~amd64"
RDEPEND="
dev-python/hopcroftkarp[${PYTHON_USEDEP}]
^ permalink raw reply related [flat|nested] 13+ messages in thread
end of thread, other threads:[~2024-02-29 2:01 UTC | newest]
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2023-05-22 13:17 Andrew Ammerlaan
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2023-01-14 10:32 Horea Christian
2023-01-14 0:59 Horea Christian
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2021-05-24 13:26 Aisha Tammy
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