From: "Horea Christian" <horea.christ@gmail.com>
To: gentoo-commits@lists.gentoo.org
Subject: [gentoo-commits] proj/sci:master commit in: sci-biology/exomiser-bin/
Date: Sun, 27 Sep 2020 21:24:30 +0000 (UTC) [thread overview]
Message-ID: <1601240616.e2f2334b11f6a99c17b945ccdbcdc3f029879db1.chymera@gentoo> (raw)
commit: e2f2334b11f6a99c17b945ccdbcdc3f029879db1
Author: Horea Christian <chr <AT> chymera <DOT> eu>
AuthorDate: Sun Sep 27 21:03:36 2020 +0000
Commit: Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Sun Sep 27 21:03:36 2020 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=e2f2334b
sci-biology/exomiser-bin: removed unmaintained package
Package-Manager: Portage-3.0.8, Repoman-3.0.1
Signed-off-by: Horea Christian <chr <AT> chymera.eu>
sci-biology/exomiser-bin/exomiser-bin-7.2.1.ebuild | 30 ----------------------
sci-biology/exomiser-bin/metadata.xml | 12 ---------
2 files changed, 42 deletions(-)
diff --git a/sci-biology/exomiser-bin/exomiser-bin-7.2.1.ebuild b/sci-biology/exomiser-bin/exomiser-bin-7.2.1.ebuild
deleted file mode 100644
index 87434fa8a..000000000
--- a/sci-biology/exomiser-bin/exomiser-bin-7.2.1.ebuild
+++ /dev/null
@@ -1,30 +0,0 @@
-# Copyright 1999-2016 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-DESCRIPTION="Annotate VCF files and prioritize genome/exome mutations"
-HOMEPAGE="http://www.sanger.ac.uk/science/tools/exomiser"
-SRC_URI="ftp://ftp.sanger.ac.uk/pub/resources/software/exomiser/downloads/exomiser/exomiser-cli-${PV}-distribution.zip
- ftp://ftp.sanger.ac.uk/pub/resources/software/exomiser/downloads/exomiser/GenomiserREADME -> ${PN}.README
- ftp://ftp.sanger.ac.uk/pub/resources/software/exomiser/downloads/exomiser/README.md -> ${PN}.README.md"
-# 1.16GB !
-
-LICENSE="AGPL-3+"
-SLOT="0"
-KEYWORDS=""
-IUSE=""
-
-DEPEND="sci-biology/Jannovar-bin"
-RDEPEND="${DEPEND}"
-
-src_install(){
- dodoc "${DISTDIR}"/${PN}.README "${DISTDIR}"/${PN}.README.md
-}
-
-pkg_postinst(){
- einfo "Please download 3.7GB file from ftp://ftp.sanger.ac.uk/pub/resources/software/exomiser/downloads/exomiser/h2_db_dumps/exomiser-${PV}.BETA.h2.db.gz"
- einfo "and follow README.md"
- einfo "The is also 19GB file ftp://ftp.sanger.ac.uk/pub/resources/software/exomiser/downloads/exomiser/exomiser-cli-7.2.1-data.zip"
- einfo "with test data"
-}
diff --git a/sci-biology/exomiser-bin/metadata.xml b/sci-biology/exomiser-bin/metadata.xml
deleted file mode 100644
index 138cb7705..000000000
--- a/sci-biology/exomiser-bin/metadata.xml
+++ /dev/null
@@ -1,12 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
-</pkgmetadata>
next reply other threads:[~2020-09-27 21:24 UTC|newest]
Thread overview: 3+ messages / expand[flat|nested] mbox.gz Atom feed top
2020-09-27 21:24 Horea Christian [this message]
-- strict thread matches above, loose matches on Subject: below --
2016-03-30 16:33 [gentoo-commits] proj/sci:master commit in: sci-biology/exomiser-bin/ Martin Mokrejs
2015-05-05 14:49 Martin Mokrejs
Reply instructions:
You may reply publicly to this message via plain-text email
using any one of the following methods:
* Save the following mbox file, import it into your mail client,
and reply-to-all from there: mbox
Avoid top-posting and favor interleaved quoting:
https://en.wikipedia.org/wiki/Posting_style#Interleaved_style
* Reply using the --to, --cc, and --in-reply-to
switches of git-send-email(1):
git send-email \
--in-reply-to=1601240616.e2f2334b11f6a99c17b945ccdbcdc3f029879db1.chymera@gentoo \
--to=horea.christ@gmail.com \
--cc=gentoo-commits@lists.gentoo.org \
--cc=gentoo-dev@lists.gentoo.org \
/path/to/YOUR_REPLY
https://kernel.org/pub/software/scm/git/docs/git-send-email.html
* If your mail client supports setting the In-Reply-To header
via mailto: links, try the mailto: link
Be sure your reply has a Subject: header at the top and a blank line
before the message body.
This is a public inbox, see mirroring instructions
for how to clone and mirror all data and code used for this inbox