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Tue, 22 Sep 2020 11:48:55 +0000 (UTC) Received: from localhost.localdomain (localhost [IPv6:::1]) by oystercatcher.gentoo.org (Postfix) with ESMTP id EAC8535F for ; Tue, 22 Sep 2020 11:48:53 +0000 (UTC) From: "Aisha Tammy" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Aisha Tammy" Message-ID: <1600775296.d8cb2c57a2d4c5777a8ae7ddd270678349e1e51c.epsilon-0@gentoo> Subject: [gentoo-commits] proj/sci:master commit in: sci-chemistry/GromacsWrapper/, sci-chemistry/GromacsWrapper/files/ X-VCS-Repository: proj/sci X-VCS-Files: sci-chemistry/GromacsWrapper/GromacsWrapper-9999.ebuild sci-chemistry/GromacsWrapper/files/0001-Drop-chmod-hack.patch sci-chemistry/GromacsWrapper/metadata.xml X-VCS-Directories: sci-chemistry/GromacsWrapper/ sci-chemistry/GromacsWrapper/files/ X-VCS-Committer: epsilon-0 X-VCS-Committer-Name: Aisha Tammy X-VCS-Revision: d8cb2c57a2d4c5777a8ae7ddd270678349e1e51c X-VCS-Branch: master Date: Tue, 22 Sep 2020 11:48:53 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Auto-Response-Suppress: DR, RN, NRN, OOF, AutoReply X-Archives-Salt: 766fb34b-b4f2-447f-87dd-06726c8e19b1 X-Archives-Hash: 0fa01c79e557e773f52e68456e87c2ed commit: d8cb2c57a2d4c5777a8ae7ddd270678349e1e51c Author: Aisha Tammy aisha cc> AuthorDate: Tue Sep 22 11:48:16 2020 +0000 Commit: Aisha Tammy aisha cc> CommitDate: Tue Sep 22 11:48:16 2020 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=d8cb2c57 sci-chemistry/GromacsWrapper: drop package present in ::gentoo Package-Manager: Portage-3.0.7, Repoman-3.0.1 Signed-off-by: Aisha Tammy aisha.cc> .../GromacsWrapper/GromacsWrapper-9999.ebuild | 40 ---------------------- .../files/0001-Drop-chmod-hack.patch | 28 --------------- sci-chemistry/GromacsWrapper/metadata.xml | 12 ------- 3 files changed, 80 deletions(-) diff --git a/sci-chemistry/GromacsWrapper/GromacsWrapper-9999.ebuild b/sci-chemistry/GromacsWrapper/GromacsWrapper-9999.ebuild deleted file mode 100644 index b51f80273..000000000 --- a/sci-chemistry/GromacsWrapper/GromacsWrapper-9999.ebuild +++ /dev/null @@ -1,40 +0,0 @@ -# Copyright 1999-2014 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 - -EAPI=5 - -PYTHON_COMPAT=( python2_7 ) - -if [[ $PV = *9999* ]]; then - scm_eclass=git-r3 - EGIT_REPO_URI=" - git://github.com/orbeckst/${PN}.git - https://github.com/orbeckst/${PN}.git" - EGIT_BRANCH="develop" - SRC_URI="" - KEYWORDS="" -else - scm_eclass=vcs-snapshot - SRC_URI="https://github.com/orbeckst/${PN}/archive/release-${PV}.tar.gz -> ${P}.tar.gz" - KEYWORDS="~amd64 ~x86" -fi - -inherit eutils distutils-r1 ${scm_eclass} - -DESCRIPTION="Python framework for Gromacs" -HOMEPAGE="http://orbeckst.github.com/GromacsWrapper/" - -LICENSE="GPL-3 LGPL-3" -SLOT="0" -IUSE="" - -DEPEND=" - >=dev-python/matplotlib-0.91.3[${PYTHON_USEDEP}] - >=dev-python/RecSQL-0.3[${PYTHON_USEDEP}] - >=sci-libs/scipy-0.9[${PYTHON_USEDEP}] - " -RDEPEND="${DEPEND}" - -PATCHES=( - "${FILESDIR}/0001-Drop-chmod-hack.patch" -) diff --git a/sci-chemistry/GromacsWrapper/files/0001-Drop-chmod-hack.patch b/sci-chemistry/GromacsWrapper/files/0001-Drop-chmod-hack.patch deleted file mode 100644 index 8645df77b..000000000 --- a/sci-chemistry/GromacsWrapper/files/0001-Drop-chmod-hack.patch +++ /dev/null @@ -1,28 +0,0 @@ -From 49b8d9662365e0e9b0725682b8a8479de402b272 Mon Sep 17 00:00:00 2001 -From: Alexey Shvetsov -Date: Sat, 23 Mar 2013 16:40:04 +0400 -Subject: [PATCH] Drop chmod hack. - -It doesnt work if wrapper installed system-wide - -Signed-off-by: Alexey Shvetsov ---- - gromacs/config.py | 2 -- - 1 file changed, 2 deletions(-) - -diff --git a/gromacs/config.py b/gromacs/config.py -index cece6fc..2e686e7 100644 ---- a/gromacs/config.py -+++ b/gromacs/config.py -@@ -619,8 +619,6 @@ del g - # Must extract because it is part of a zipped python egg; - # see http://peak.telecommunity.com/DevCenter/PythonEggs#accessing-package-resources - GridMAT_MD = resource_filename(__name__,'external/GridMAT-MD_v1.0.2/GridMAT-MD.pl') --os.chmod(GridMAT_MD, 0755) -- - - #: 3rd party bundled analysis scripts and tools; this is a list of triplets of - #: --- -1.8.1.5 - diff --git a/sci-chemistry/GromacsWrapper/metadata.xml b/sci-chemistry/GromacsWrapper/metadata.xml deleted file mode 100644 index 7daa2ce7e..000000000 --- a/sci-chemistry/GromacsWrapper/metadata.xml +++ /dev/null @@ -1,12 +0,0 @@ - - - - - alexxy@gentoo.org - Alexey Shvetsov - - - sci-chemistry@gentoo.org - Gentoo Chemistry Project - -