[gentoo-commits] proj/sci:master commit in: sci-biology/vcftools/

["Aisha Tammy" <gentoo@aisha.cc>]

commit:     073eeef7c958c27b1446350637f65da82af168fa
Author:     Aisha Tammy <gentoo <AT> aisha <DOT> cc>
AuthorDate: Tue Sep 22 11:11:06 2020 +0000
Commit:     Aisha Tammy <gentoo <AT> aisha <DOT> cc>
CommitDate: Tue Sep 22 11:11:06 2020 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=073eeef7

sci-biology/vcftools: drop package

present in ::gentoo

Package-Manager: Portage-3.0.7, Repoman-3.0.1
Signed-off-by: Aisha Tammy <gentoo <AT> aisha.cc>

 sci-biology/vcftools/metadata.xml           | 12 ----------
 sci-biology/vcftools/vcftools-0.1.15.ebuild | 36 -----------------------------
 2 files changed, 48 deletions(-)

diff --git a/sci-biology/vcftools/metadata.xml b/sci-biology/vcftools/metadata.xml
deleted file mode 100644
index 0253c16be..000000000
--- a/sci-biology/vcftools/metadata.xml
+++ /dev/null
@@ -1,12 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-	<maintainer type="project">
-		<email>sci-biology@gentoo.org</email>
-		<name>Gentoo Biology Project</name>
-	</maintainer>
-	<upstream>
-		<remote-id type="github">vcftools/vcftools</remote-id>
-		<remote-id type="sourceforge">vcftools</remote-id>
-	</upstream>
-</pkgmetadata>

diff --git a/sci-biology/vcftools/vcftools-0.1.15.ebuild b/sci-biology/vcftools/vcftools-0.1.15.ebuild
deleted file mode 100644
index 3748c67f0..000000000
--- a/sci-biology/vcftools/vcftools-0.1.15.ebuild
+++ /dev/null
@@ -1,36 +0,0 @@
-# Copyright 1999-2017 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=6
-
-inherit flag-o-matic perl-functions toolchain-funcs
-
-MY_PV=${PV/_pre/}
-S="${WORKDIR}/${PN}-${MY_PV}"
-
-DESCRIPTION="Tools for working with VCF (Variant Call Format) files"
-HOMEPAGE="http://vcftools.sourceforge.net/"
-SRC_URI="https://github.com/${PN}/${PN}/releases/download/v${PV}/${PN}-${PV}.tar.gz"
-
-LICENSE="LGPL-3"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE="lapack"
-
-RDEPEND="
-	sys-libs/zlib
-	dev-lang/perl:=
-	lapack? ( virtual/lapack )"
-DEPEND="${RDEPEND}
-	virtual/pkgconfig"
-
-src_configure() {
-	perl_set_version
-
-	append-flags $($(tc-getPKG_CONFIG) --cflags lapack)
-	append-libs $($(tc-getPKG_CONFIG) --libs lapack)
-
-	econf \
-		$(use_enable lapack pca) \
-		--with-pmdir="${VENDOR_LIB#${EPREFIX}/usr}"
-}