[gentoo-commits] proj/sci:master commit in: sci-biology/deeptools/

[gentoo-commits] proj/sci:master commit in: sci-biology/deeptools/

[Martin Mokrejs]

commit:     b0176e52f19303e32d2797d6b41273a70dfb2b2c
Author:     Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Fri Mar 31 21:10:09 2017 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Fri Mar 31 21:10:09 2017 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=b0176e52

sci-biology/deeptools: add new package

Package-Manager: Portage-2.3.5, Repoman-2.3.1

 sci-biology/deeptools/deeptools-2.5.0.ebuild | 32 ++++++++++++++++++++++++++++
 sci-biology/deeptools/deeptools-9999.ebuild  | 32 ++++++++++++++++++++++++++++
 sci-biology/deeptools/metadata.xml           | 12 +++++++++++
 3 files changed, 76 insertions(+)

diff --git a/sci-biology/deeptools/deeptools-2.5.0.ebuild b/sci-biology/deeptools/deeptools-2.5.0.ebuild
new file mode 100644
index 000000000..e69672942
--- /dev/null
+++ b/sci-biology/deeptools/deeptools-2.5.0.ebuild
@@ -0,0 +1,32 @@
+# Copyright 1999-2017 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=6
+
+PYTHON_COMPAT=( python2_7 python3_5 )
+
+inherit distutils-r1
+
+[ "$PV" == "9999" ] && inherit git-2
+
+DESCRIPTION="Extract reads from BAM files, normalize, draw figures, convert BAM to bigWig"
+HOMEPAGE="https://github.com/fidelram/deepTools"
+if [ "$PV" == "9999" ]; then
+	EGIT_REPO_URI="https://github.com/fidelram/deepTools"
+	KEYWORDS=""
+else
+	SRC_URI="https://github.com/fidelram/deepTools/archive/2.5.0.tar.gz -> ${P}.tar.gz"
+	KEYWORDS="~amd64"
+fi
+
+LICENSE="GPL-3"
+SLOT="0"
+IUSE=""
+
+DEPEND=">=dev-python/numpy-1.8.0
+		>=sci-libs/scipy-0.17.0
+		>=dev-python/py2bit-0.1.0
+		>=dev-python/pyBigWig-0.2.1
+		>=sci-biology/pysam-0.8
+		>=dev-python/matplotlib-1.4.0"
+RDEPEND="${DEPEND}"

diff --git a/sci-biology/deeptools/deeptools-9999.ebuild b/sci-biology/deeptools/deeptools-9999.ebuild
new file mode 100644
index 000000000..a2c1fcfb9
--- /dev/null
+++ b/sci-biology/deeptools/deeptools-9999.ebuild
@@ -0,0 +1,32 @@
+# Copyright 1999-2017 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=5
+
+PYTHON_COMPAT=( python2_7 python3_5 )
+
+inherit distutils-r1
+
+[ "$PV" == "9999" ] && inherit git-2
+
+DESCRIPTION="Extract reads from BAM files, normalize, draw figures, convert BAM to bigWig"
+HOMEPAGE="https://github.com/fidelram/deepTools"
+if [ "$PV" == "9999" ]; then
+	EGIT_REPO_URI="https://github.com/fidelram/deepTools"
+	KEYWORDS=""
+else
+	SRC_URI="https://github.com/fidelram/deepTools/archive/2.5.0.tar.gz -> ${P}.tar.gz"
+	KEYWORDS="~amd64"
+fi
+
+LICENSE="GPL-3"
+SLOT="0"
+IUSE=""
+
+DEPEND=">=dev-python/numpy-1.8.0
+		>=sci-libs/scipy-0.17.0
+		>=dev-python/py2bit-0.1.0
+		>=dev-python/pyBigWig-0.2.1
+		>=sci-biology/pysam-0.8
+		>=dev-python/matplotlib-1.4.0"
+RDEPEND="${DEPEND}"

diff --git a/sci-biology/deeptools/metadata.xml b/sci-biology/deeptools/metadata.xml
new file mode 100644
index 000000000..f68a1b6fa
--- /dev/null
+++ b/sci-biology/deeptools/metadata.xml
@@ -0,0 +1,12 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+  <maintainer type="person">
+    <email>mmokrejs@fold.natur.cuni.cz</email>
+    <name>Martin Mokrejs</name>
+  </maintainer>
+  <maintainer type="project">
+    <email>sci-biology@gentoo.org</email>
+    <name>Gentoo Biology Project</name>
+  </maintainer>
+</pkgmetadata>

[gentoo-commits] proj/sci:master commit in: sci-biology/deeptools/

[Horea Christian]

commit:     7427cd98637c28d8ca30cc61094c980034113dfb
Author:     Horea Christian <chr <AT> chymera <DOT> eu>
AuthorDate: Sun Sep 13 20:39:57 2020 +0000
Commit:     Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Sun Sep 13 20:39:57 2020 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=7427cd98

sci-biology/deeptools: QA fix: EAPI 7, git-r3 eclass, copyright bump

Package-Manager: Portage-3.0.6, Repoman-3.0.1
Signed-off-by: Horea Christian <chr <AT> chymera.eu>

 sci-biology/deeptools/deeptools-2.5.0.ebuild | 4 ++--
 sci-biology/deeptools/deeptools-9999.ebuild  | 6 +++---
 2 files changed, 5 insertions(+), 5 deletions(-)

diff --git a/sci-biology/deeptools/deeptools-2.5.0.ebuild b/sci-biology/deeptools/deeptools-2.5.0.ebuild
index e69672942..a0d1d47cd 100644
--- a/sci-biology/deeptools/deeptools-2.5.0.ebuild
+++ b/sci-biology/deeptools/deeptools-2.5.0.ebuild
@@ -1,7 +1,7 @@
-# Copyright 1999-2017 Gentoo Foundation
+# Copyright 1999-2020 Gentoo Authors
 # Distributed under the terms of the GNU General Public License v2
 
-EAPI=6
+EAPI=7
 
 PYTHON_COMPAT=( python2_7 python3_5 )
 

diff --git a/sci-biology/deeptools/deeptools-9999.ebuild b/sci-biology/deeptools/deeptools-9999.ebuild
index a2c1fcfb9..3e73bdec5 100644
--- a/sci-biology/deeptools/deeptools-9999.ebuild
+++ b/sci-biology/deeptools/deeptools-9999.ebuild
@@ -1,13 +1,13 @@
-# Copyright 1999-2017 Gentoo Foundation
+# Copyright 1999-2020 Gentoo Authors
 # Distributed under the terms of the GNU General Public License v2
 
-EAPI=5
+EAPI=7
 
 PYTHON_COMPAT=( python2_7 python3_5 )
 
 inherit distutils-r1
 
-[ "$PV" == "9999" ] && inherit git-2
+[ "$PV" == "9999" ] && inherit git-r3
 
 DESCRIPTION="Extract reads from BAM files, normalize, draw figures, convert BAM to bigWig"
 HOMEPAGE="https://github.com/fidelram/deepTools"

[gentoo-commits] proj/sci:master commit in: sci-biology/deeptools/

[Horea Christian]

commit:     021ac334c980bba7a50590d2dd6c7345a3c67e39
Author:     Horea Christian <chr <AT> chymera <DOT> eu>
AuthorDate: Sun Sep 13 21:10:22 2020 +0000
Commit:     Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Sun Sep 13 21:10:22 2020 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=021ac334

sci-biology/deeptools: QA fix: KEYWORDS and conditional definition

Package-Manager: Portage-3.0.6, Repoman-3.0.1
Signed-off-by: Horea Christian <chr <AT> chymera.eu>

 sci-biology/deeptools/deeptools-2.5.0.ebuild | 8 +++-----
 sci-biology/deeptools/deeptools-9999.ebuild  | 7 ++-----
 2 files changed, 5 insertions(+), 10 deletions(-)

diff --git a/sci-biology/deeptools/deeptools-2.5.0.ebuild b/sci-biology/deeptools/deeptools-2.5.0.ebuild
index a0d1d47cd..eb9d530dd 100644
--- a/sci-biology/deeptools/deeptools-2.5.0.ebuild
+++ b/sci-biology/deeptools/deeptools-2.5.0.ebuild
@@ -7,21 +7,19 @@ PYTHON_COMPAT=( python2_7 python3_5 )
 
 inherit distutils-r1
 
-[ "$PV" == "9999" ] && inherit git-2
+[[ "$PV" == "9999" ]] && inherit git-r3
 
 DESCRIPTION="Extract reads from BAM files, normalize, draw figures, convert BAM to bigWig"
 HOMEPAGE="https://github.com/fidelram/deepTools"
-if [ "$PV" == "9999" ]; then
+if [[ "$PV" == "9999" ]]; then
 	EGIT_REPO_URI="https://github.com/fidelram/deepTools"
-	KEYWORDS=""
 else
 	SRC_URI="https://github.com/fidelram/deepTools/archive/2.5.0.tar.gz -> ${P}.tar.gz"
-	KEYWORDS="~amd64"
 fi
 
 LICENSE="GPL-3"
 SLOT="0"
-IUSE=""
+KEYWORDS="~amd64"
 
 DEPEND=">=dev-python/numpy-1.8.0
 		>=sci-libs/scipy-0.17.0

diff --git a/sci-biology/deeptools/deeptools-9999.ebuild b/sci-biology/deeptools/deeptools-9999.ebuild
index 3e73bdec5..7c3896433 100644
--- a/sci-biology/deeptools/deeptools-9999.ebuild
+++ b/sci-biology/deeptools/deeptools-9999.ebuild
@@ -7,21 +7,18 @@ PYTHON_COMPAT=( python2_7 python3_5 )
 
 inherit distutils-r1
 
-[ "$PV" == "9999" ] && inherit git-r3
+[[ "$PV" == "9999" ]] && inherit git-r3
 
 DESCRIPTION="Extract reads from BAM files, normalize, draw figures, convert BAM to bigWig"
 HOMEPAGE="https://github.com/fidelram/deepTools"
-if [ "$PV" == "9999" ]; then
+if [[ "$PV" == "9999" ]]; then
 	EGIT_REPO_URI="https://github.com/fidelram/deepTools"
-	KEYWORDS=""
 else
 	SRC_URI="https://github.com/fidelram/deepTools/archive/2.5.0.tar.gz -> ${P}.tar.gz"
-	KEYWORDS="~amd64"
 fi
 
 LICENSE="GPL-3"
 SLOT="0"
-IUSE=""
 
 DEPEND=">=dev-python/numpy-1.8.0
 		>=sci-libs/scipy-0.17.0

[gentoo-commits] proj/sci:master commit in: sci-biology/deeptools/

[Horea Christian]

commit:     76926ef29fca81c7d72833654c27f9dccc09358c
Author:     Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
AuthorDate: Sat Jan  2 13:35:22 2021 +0000
Commit:     Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Sun Jan  3 06:25:30 2021 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=76926ef2

sci-biology/deeptools: version bump, bump py targets, enable sphinx

Package-Manager: Portage-3.0.12, Repoman-3.0.2
Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> riseup.net>
Signed-off-by: Horea Christian <chr <AT> chymera.eu>

 sci-biology/deeptools/deeptools-2.5.0.ebuild | 30 -----------------------
 sci-biology/deeptools/deeptools-3.5.0.ebuild | 36 ++++++++++++++++++++++++++++
 sci-biology/deeptools/deeptools-9999.ebuild  | 29 ----------------------
 3 files changed, 36 insertions(+), 59 deletions(-)

diff --git a/sci-biology/deeptools/deeptools-2.5.0.ebuild b/sci-biology/deeptools/deeptools-2.5.0.ebuild
deleted file mode 100644
index e57fe3313..000000000
--- a/sci-biology/deeptools/deeptools-2.5.0.ebuild
+++ /dev/null
@@ -1,30 +0,0 @@
-# Copyright 1999-2020 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-PYTHON_COMPAT=( python2_7 python3_5 )
-
-inherit distutils-r1
-
-[[ "$PV" == "9999" ]] && inherit git-r3
-
-DESCRIPTION="Extract reads from BAM files, normalize, draw figures, convert BAM to bigWig"
-HOMEPAGE="https://github.com/fidelram/deepTools"
-if [[ "$PV" == "9999" ]]; then
-	EGIT_REPO_URI="https://github.com/fidelram/deepTools"
-else
-	SRC_URI="https://github.com/fidelram/deepTools/archive/2.5.0.tar.gz -> ${P}.tar.gz"
-fi
-
-LICENSE="GPL-3"
-SLOT="0"
-KEYWORDS="~amd64"
-
-DEPEND=">=dev-python/numpy-1.8.0
-		>=dev-python/scipy-0.17.0
-		>=dev-python/py2bit-0.1.0
-		>=dev-python/pyBigWig-0.2.1
-		>=sci-biology/pysam-0.8
-		>=dev-python/matplotlib-1.4.0"
-RDEPEND="${DEPEND}"

diff --git a/sci-biology/deeptools/deeptools-3.5.0.ebuild b/sci-biology/deeptools/deeptools-3.5.0.ebuild
new file mode 100644
index 000000000..f53a19bcb
--- /dev/null
+++ b/sci-biology/deeptools/deeptools-3.5.0.ebuild
@@ -0,0 +1,36 @@
+# Copyright 1999-2021 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+
+PYTHON_COMPAT=( python3_{7,8,9} )
+
+inherit distutils-r1
+
+DESCRIPTION="Extract reads from BAM files, normalize, draw figures, convert BAM to bigWig"
+HOMEPAGE="https://github.com/deeptools/deepTools"
+SRC_URI="https://github.com/deeptools/deepTools/archive/${PV}.tar.gz -> ${P}.tar.gz"
+
+LICENSE="BSD"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+
+# TODO: fix this
+RESTRICT="test"
+
+RDEPEND="
+	>=sci-biology/deeptools-intervals-0.1.8[${PYTHON_USEDEP}]
+	>=dev-python/numpy-1.9.0[${PYTHON_USEDEP}]
+	>=dev-python/numpydoc-0.5[${PYTHON_USEDEP}]
+	>=dev-python/scipy-0.17.0[${PYTHON_USEDEP}]
+	>=dev-python/plotly-2.0.0[${PYTHON_USEDEP}]
+	>=dev-python/py2bit-0.2.0[${PYTHON_USEDEP}]
+	>=dev-python/pyBigWig-0.2.1[${PYTHON_USEDEP}]
+	>=sci-biology/pysam-0.14.0[${PYTHON_USEDEP}]
+	>=dev-python/matplotlib-3.1.0[${PYTHON_USEDEP}]
+"
+
+S="${WORKDIR}/deepTools-${PV}"
+
+distutils_enable_sphinx docs dev-python/sphinx_rtd_theme dev-python/sphinx-argparse
+distutils_enable_tests nose

diff --git a/sci-biology/deeptools/deeptools-9999.ebuild b/sci-biology/deeptools/deeptools-9999.ebuild
deleted file mode 100644
index 89a8bf763..000000000
--- a/sci-biology/deeptools/deeptools-9999.ebuild
+++ /dev/null
@@ -1,29 +0,0 @@
-# Copyright 1999-2020 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-PYTHON_COMPAT=( python2_7 python3_5 )
-
-inherit distutils-r1
-
-[[ "$PV" == "9999" ]] && inherit git-r3
-
-DESCRIPTION="Extract reads from BAM files, normalize, draw figures, convert BAM to bigWig"
-HOMEPAGE="https://github.com/fidelram/deepTools"
-if [[ "$PV" == "9999" ]]; then
-	EGIT_REPO_URI="https://github.com/fidelram/deepTools"
-else
-	SRC_URI="https://github.com/fidelram/deepTools/archive/2.5.0.tar.gz -> ${P}.tar.gz"
-fi
-
-LICENSE="GPL-3"
-SLOT="0"
-
-DEPEND=">=dev-python/numpy-1.8.0
-		>=dev-python/scipy-0.17.0
-		>=dev-python/py2bit-0.1.0
-		>=dev-python/pyBigWig-0.2.1
-		>=sci-biology/pysam-0.8
-		>=dev-python/matplotlib-1.4.0"
-RDEPEND="${DEPEND}"

[gentoo-commits] proj/sci:master commit in: sci-biology/deeptools/

[Horea Christian]

commit:     7d409d7497bc831fda6854cb3b511986001e3d86
Author:     Horea Christian <chr <AT> chymera <DOT> eu>
AuthorDate: Fri Jan 13 08:50:33 2023 +0000
Commit:     Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Fri Jan 13 08:50:33 2023 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=7d409d74

sci-biology/deeptools: update EAPI 7 -> 8

Signed-off-by: Horea Christian <chr <AT> chymera.eu>

 sci-biology/deeptools/deeptools-3.5.0.ebuild | 8 ++++----
 1 file changed, 4 insertions(+), 4 deletions(-)

diff --git a/sci-biology/deeptools/deeptools-3.5.0.ebuild b/sci-biology/deeptools/deeptools-3.5.0.ebuild
index f53a19bcb..5dbf6dc55 100644
--- a/sci-biology/deeptools/deeptools-3.5.0.ebuild
+++ b/sci-biology/deeptools/deeptools-3.5.0.ebuild
@@ -1,9 +1,9 @@
-# Copyright 1999-2021 Gentoo Authors
+# Copyright 1999-2023 Gentoo Authors
 # Distributed under the terms of the GNU General Public License v2
 
-EAPI=7
+EAPI=8
 
-PYTHON_COMPAT=( python3_{7,8,9} )
+PYTHON_COMPAT=( python3_{10..10} )
 
 inherit distutils-r1
 
@@ -23,7 +23,7 @@ RDEPEND="
 	>=dev-python/numpy-1.9.0[${PYTHON_USEDEP}]
 	>=dev-python/numpydoc-0.5[${PYTHON_USEDEP}]
 	>=dev-python/scipy-0.17.0[${PYTHON_USEDEP}]
-	>=dev-python/plotly-2.0.0[${PYTHON_USEDEP}]
+	dev-python/plotly[${PYTHON_USEDEP}]
 	>=dev-python/py2bit-0.2.0[${PYTHON_USEDEP}]
 	>=dev-python/pyBigWig-0.2.1[${PYTHON_USEDEP}]
 	>=sci-biology/pysam-0.14.0[${PYTHON_USEDEP}]

[gentoo-commits] proj/sci:master commit in: sci-biology/deeptools/

[Horea Christian]

commit:     e77cdd7196f6fe5a0c488260fd37a76bd9ea7f8c
Author:     Horea Christian <chr <AT> chymera <DOT> eu>
AuthorDate: Fri Jan 13 08:53:46 2023 +0000
Commit:     Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Fri Jan 13 08:53:46 2023 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=e77cdd71

sci-biology/deeptools: deprecating tests

Signed-off-by: Horea Christian <chr <AT> chymera.eu>

 sci-biology/deeptools/deeptools-3.5.0.ebuild | 2 +-
 sci-biology/deeptools/deeptools-3.5.1.ebuild | 2 +-
 2 files changed, 2 insertions(+), 2 deletions(-)

diff --git a/sci-biology/deeptools/deeptools-3.5.0.ebuild b/sci-biology/deeptools/deeptools-3.5.0.ebuild
index 5dbf6dc55..fc48e2224 100644
--- a/sci-biology/deeptools/deeptools-3.5.0.ebuild
+++ b/sci-biology/deeptools/deeptools-3.5.0.ebuild
@@ -33,4 +33,4 @@ RDEPEND="
 S="${WORKDIR}/deepTools-${PV}"
 
 distutils_enable_sphinx docs dev-python/sphinx_rtd_theme dev-python/sphinx-argparse
-distutils_enable_tests nose
+#distutils_enable_tests nose

diff --git a/sci-biology/deeptools/deeptools-3.5.1.ebuild b/sci-biology/deeptools/deeptools-3.5.1.ebuild
index 5dbf6dc55..fc48e2224 100644
--- a/sci-biology/deeptools/deeptools-3.5.1.ebuild
+++ b/sci-biology/deeptools/deeptools-3.5.1.ebuild
@@ -33,4 +33,4 @@ RDEPEND="
 S="${WORKDIR}/deepTools-${PV}"
 
 distutils_enable_sphinx docs dev-python/sphinx_rtd_theme dev-python/sphinx-argparse
-distutils_enable_tests nose
+#distutils_enable_tests nose

[gentoo-commits] proj/sci:master commit in: sci-biology/deeptools/

[Horea Christian]

commit:     701845a53aaac429eca917f44a0de89e5a7b4024
Author:     Horea Christian <chr <AT> chymera <DOT> eu>
AuthorDate: Fri Jan 13 08:53:00 2023 +0000
Commit:     Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Fri Jan 13 08:53:00 2023 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=701845a5

sci-biology/deeptools: add 3.5.1

Signed-off-by: Horea Christian <chr <AT> chymera.eu>

 sci-biology/deeptools/deeptools-3.5.1.ebuild | 36 ++++++++++++++++++++++++++++
 1 file changed, 36 insertions(+)

diff --git a/sci-biology/deeptools/deeptools-3.5.1.ebuild b/sci-biology/deeptools/deeptools-3.5.1.ebuild
new file mode 100644
index 000000000..5dbf6dc55
--- /dev/null
+++ b/sci-biology/deeptools/deeptools-3.5.1.ebuild
@@ -0,0 +1,36 @@
+# Copyright 1999-2023 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=8
+
+PYTHON_COMPAT=( python3_{10..10} )
+
+inherit distutils-r1
+
+DESCRIPTION="Extract reads from BAM files, normalize, draw figures, convert BAM to bigWig"
+HOMEPAGE="https://github.com/deeptools/deepTools"
+SRC_URI="https://github.com/deeptools/deepTools/archive/${PV}.tar.gz -> ${P}.tar.gz"
+
+LICENSE="BSD"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+
+# TODO: fix this
+RESTRICT="test"
+
+RDEPEND="
+	>=sci-biology/deeptools-intervals-0.1.8[${PYTHON_USEDEP}]
+	>=dev-python/numpy-1.9.0[${PYTHON_USEDEP}]
+	>=dev-python/numpydoc-0.5[${PYTHON_USEDEP}]
+	>=dev-python/scipy-0.17.0[${PYTHON_USEDEP}]
+	dev-python/plotly[${PYTHON_USEDEP}]
+	>=dev-python/py2bit-0.2.0[${PYTHON_USEDEP}]
+	>=dev-python/pyBigWig-0.2.1[${PYTHON_USEDEP}]
+	>=sci-biology/pysam-0.14.0[${PYTHON_USEDEP}]
+	>=dev-python/matplotlib-3.1.0[${PYTHON_USEDEP}]
+"
+
+S="${WORKDIR}/deepTools-${PV}"
+
+distutils_enable_sphinx docs dev-python/sphinx_rtd_theme dev-python/sphinx-argparse
+distutils_enable_tests nose

[gentoo-commits] proj/sci:master commit in: sci-biology/deeptools/

[Horea Christian]

commit:     17688a432b33d4ce2ecb5fe1cbc25e7e36efe288
Author:     Horea Christian <chr <AT> chymera <DOT> eu>
AuthorDate: Thu Feb 29 02:05:41 2024 +0000
Commit:     Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Thu Feb 29 02:05:41 2024 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=17688a43

sci-biology/deeptools: dropped ~x86, added PEP517

Signed-off-by: Horea Christian <chr <AT> chymera.eu>

 sci-biology/deeptools/deeptools-3.5.0.ebuild | 5 +++--
 sci-biology/deeptools/deeptools-3.5.1.ebuild | 5 +++--
 2 files changed, 6 insertions(+), 4 deletions(-)

diff --git a/sci-biology/deeptools/deeptools-3.5.0.ebuild b/sci-biology/deeptools/deeptools-3.5.0.ebuild
index a76bf6690..7c2eaa739 100644
--- a/sci-biology/deeptools/deeptools-3.5.0.ebuild
+++ b/sci-biology/deeptools/deeptools-3.5.0.ebuild
@@ -3,7 +3,8 @@
 
 EAPI=8
 
-PYTHON_COMPAT=( python3_{10..10} )
+DISTUTILS_USE_PEP517=setuptools
+PYTHON_COMPAT=( python3_{10..11} )
 
 inherit distutils-r1
 
@@ -13,7 +14,7 @@ SRC_URI="https://github.com/deeptools/deepTools/archive/${PV}.tar.gz -> ${P}.tar
 
 LICENSE="BSD"
 SLOT="0"
-KEYWORDS="~amd64 ~x86"
+KEYWORDS="~amd64"
 
 # TODO: fix this
 RESTRICT="test"

diff --git a/sci-biology/deeptools/deeptools-3.5.1.ebuild b/sci-biology/deeptools/deeptools-3.5.1.ebuild
index a76bf6690..7c2eaa739 100644
--- a/sci-biology/deeptools/deeptools-3.5.1.ebuild
+++ b/sci-biology/deeptools/deeptools-3.5.1.ebuild
@@ -3,7 +3,8 @@
 
 EAPI=8
 
-PYTHON_COMPAT=( python3_{10..10} )
+DISTUTILS_USE_PEP517=setuptools
+PYTHON_COMPAT=( python3_{10..11} )
 
 inherit distutils-r1
 
@@ -13,7 +14,7 @@ SRC_URI="https://github.com/deeptools/deepTools/archive/${PV}.tar.gz -> ${P}.tar
 
 LICENSE="BSD"
 SLOT="0"
-KEYWORDS="~amd64 ~x86"
+KEYWORDS="~amd64"
 
 # TODO: fix this
 RESTRICT="test"