From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by finch.gentoo.org (Postfix) with ESMTPS id 0EDFB138359 for ; Mon, 3 Aug 2020 18:17:33 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id 42F58E0907; Mon, 3 Aug 2020 18:17:32 +0000 (UTC) Received: from smtp.gentoo.org (dev.gentoo.org [IPv6:2001:470:ea4a:1:5054:ff:fec7:86e4]) (using TLSv1.2 with cipher ECDHE-RSA-AES128-GCM-SHA256 (128/128 bits)) (No client certificate requested) by pigeon.gentoo.org (Postfix) with ESMTPS id 2A865E0907 for ; Mon, 3 Aug 2020 18:17:32 +0000 (UTC) Received: from oystercatcher.gentoo.org (unknown [IPv6:2a01:4f8:202:4333:225:90ff:fed9:fc84]) (using TLSv1.2 with cipher ECDHE-RSA-AES128-GCM-SHA256 (128/128 bits)) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id 4A1BA34EE84 for ; Mon, 3 Aug 2020 18:17:31 +0000 (UTC) Received: from localhost.localdomain (localhost [IPv6:::1]) by oystercatcher.gentoo.org (Postfix) with ESMTP id BF947274 for ; Mon, 3 Aug 2020 18:17:29 +0000 (UTC) From: "David Seifert" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "David Seifert" Message-ID: <1596478636.b4b33dfa42e5b47cf0bfbf07275fd5b8c576a018.soap@gentoo> Subject: [gentoo-commits] repo/gentoo:master commit in: sci-biology/samtools/ X-VCS-Repository: repo/gentoo X-VCS-Files: sci-biology/samtools/samtools-0.1.20-r4.ebuild X-VCS-Directories: sci-biology/samtools/ X-VCS-Committer: soap X-VCS-Committer-Name: David Seifert X-VCS-Revision: b4b33dfa42e5b47cf0bfbf07275fd5b8c576a018 X-VCS-Branch: master Date: Mon, 3 Aug 2020 18:17:29 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Auto-Response-Suppress: DR, RN, NRN, OOF, AutoReply X-Archives-Salt: ac9c8dfb-874c-4a0f-99b0-768fe2b1d8c6 X-Archives-Hash: 996b30b1d17b704124de5a9483e8f7ca commit: b4b33dfa42e5b47cf0bfbf07275fd5b8c576a018 Author: David Seifert gentoo org> AuthorDate: Mon Aug 3 18:17:16 2020 +0000 Commit: David Seifert gentoo org> CommitDate: Mon Aug 3 18:17:16 2020 +0000 URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=b4b33dfa sci-biology/samtools: [QA] Fix UnnecessarySlashStrip Package-Manager: Portage-3.0.1, Repoman-2.3.23 Signed-off-by: David Seifert gentoo.org> sci-biology/samtools/samtools-0.1.20-r4.ebuild | 10 +++++----- 1 file changed, 5 insertions(+), 5 deletions(-) diff --git a/sci-biology/samtools/samtools-0.1.20-r4.ebuild b/sci-biology/samtools/samtools-0.1.20-r4.ebuild index 2c76f0580f8..d598a329272 100644 --- a/sci-biology/samtools/samtools-0.1.20-r4.ebuild +++ b/sci-biology/samtools/samtools-0.1.20-r4.ebuild @@ -36,16 +36,16 @@ src_install() { # install executables and hide them away from sight dobin samtools bcftools/{bcftools,vcfutils.pl} misc/{*.py,*.pl,wgsim,ace2sam} \ misc/{md5sum-lite,maq2sam-short,bamcheck,maq2sam-long,md5fa,plot-bamcheck} - mv "${ED%/}"/usr/{bin,${PN}-${SLOT}} || die - mkdir "${ED%/}"/usr/bin || die - mv "${ED%/}"/usr/{${PN}-${SLOT},bin/} || die + mv "${ED}"/usr/{bin,${PN}-${SLOT}} || die + mkdir "${ED}"/usr/bin || die + mv "${ED}"/usr/{${PN}-${SLOT},bin/} || die # remove py2 script, has been removed upstream anyways # https://github.com/samtools/samtools/issues/1125 - rm "${ED%/}"/usr/bin/${PN}-${SLOT}/varfilter.py || die + rm "${ED}"/usr/bin/${PN}-${SLOT}/varfilter.py || die # fix perl shebangs - pushd "${ED%/}"/usr/bin/${PN}-${SLOT} >/dev/null || die + pushd "${ED}"/usr/bin/${PN}-${SLOT} >/dev/null || die local i for i in plot-bamcheck *.pl; do sed -e '1s:.*:#!/usr/bin/env perl:' -i "${i}" || die