From: "David Seifert" <soap@gentoo.org>
To: gentoo-commits@lists.gentoo.org
Subject: [gentoo-commits] repo/gentoo:master commit in: sci-biology/samtools/
Date: Mon, 3 Aug 2020 18:17:29 +0000 (UTC) [thread overview]
Message-ID: <1596478636.b4b33dfa42e5b47cf0bfbf07275fd5b8c576a018.soap@gentoo> (raw)
commit: b4b33dfa42e5b47cf0bfbf07275fd5b8c576a018
Author: David Seifert <soap <AT> gentoo <DOT> org>
AuthorDate: Mon Aug 3 18:17:16 2020 +0000
Commit: David Seifert <soap <AT> gentoo <DOT> org>
CommitDate: Mon Aug 3 18:17:16 2020 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=b4b33dfa
sci-biology/samtools: [QA] Fix UnnecessarySlashStrip
Package-Manager: Portage-3.0.1, Repoman-2.3.23
Signed-off-by: David Seifert <soap <AT> gentoo.org>
sci-biology/samtools/samtools-0.1.20-r4.ebuild | 10 +++++-----
1 file changed, 5 insertions(+), 5 deletions(-)
diff --git a/sci-biology/samtools/samtools-0.1.20-r4.ebuild b/sci-biology/samtools/samtools-0.1.20-r4.ebuild
index 2c76f0580f8..d598a329272 100644
--- a/sci-biology/samtools/samtools-0.1.20-r4.ebuild
+++ b/sci-biology/samtools/samtools-0.1.20-r4.ebuild
@@ -36,16 +36,16 @@ src_install() {
# install executables and hide them away from sight
dobin samtools bcftools/{bcftools,vcfutils.pl} misc/{*.py,*.pl,wgsim,ace2sam} \
misc/{md5sum-lite,maq2sam-short,bamcheck,maq2sam-long,md5fa,plot-bamcheck}
- mv "${ED%/}"/usr/{bin,${PN}-${SLOT}} || die
- mkdir "${ED%/}"/usr/bin || die
- mv "${ED%/}"/usr/{${PN}-${SLOT},bin/} || die
+ mv "${ED}"/usr/{bin,${PN}-${SLOT}} || die
+ mkdir "${ED}"/usr/bin || die
+ mv "${ED}"/usr/{${PN}-${SLOT},bin/} || die
# remove py2 script, has been removed upstream anyways
# https://github.com/samtools/samtools/issues/1125
- rm "${ED%/}"/usr/bin/${PN}-${SLOT}/varfilter.py || die
+ rm "${ED}"/usr/bin/${PN}-${SLOT}/varfilter.py || die
# fix perl shebangs
- pushd "${ED%/}"/usr/bin/${PN}-${SLOT} >/dev/null || die
+ pushd "${ED}"/usr/bin/${PN}-${SLOT} >/dev/null || die
local i
for i in plot-bamcheck *.pl; do
sed -e '1s:.*:#!/usr/bin/env perl:' -i "${i}" || die
next reply other threads:[~2020-08-03 18:17 UTC|newest]
Thread overview: 29+ messages / expand[flat|nested] mbox.gz Atom feed top
2020-08-03 18:17 David Seifert [this message]
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2024-05-24 8:59 [gentoo-commits] repo/gentoo:master commit in: sci-biology/samtools/ David Seifert
2024-05-24 8:59 David Seifert
2024-03-26 11:06 David Seifert
2023-04-06 19:29 David Seifert
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2022-12-27 0:06 David Seifert
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2021-07-17 21:30 David Seifert
2020-08-03 17:40 David Seifert
2020-08-03 16:56 David Seifert
2020-03-27 10:35 David Seifert
2018-10-28 20:25 David Seifert
2016-10-03 20:21 David Seifert
2016-04-10 9:21 David Seifert
2016-04-09 19:58 David Seifert
2016-03-27 22:53 David Seifert
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2016-03-27 22:40 David Seifert
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2016-03-27 22:40 David Seifert
2015-09-24 12:56 Agostino Sarubbo
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