* [gentoo-commits] repo/gentoo:master commit in: dev-python/mpi4py/files/, dev-python/mpi4py/
@ 2020-06-06 13:17 Andreas Sturmlechner
0 siblings, 0 replies; 2+ messages in thread
From: Andreas Sturmlechner @ 2020-06-06 13:17 UTC (permalink / raw
To: gentoo-commits
commit: a1b504563aa4c57e0706fd5034b47eb2be4fe211
Author: Andreas Sturmlechner <asturm <AT> gentoo <DOT> org>
AuthorDate: Sat Jun 6 10:28:43 2020 +0000
Commit: Andreas Sturmlechner <asturm <AT> gentoo <DOT> org>
CommitDate: Sat Jun 6 13:17:00 2020 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=a1b50456
dev-python/mpi4py: 3.0.3 version bump w/ python3_8, python3_9
Package-Manager: Portage-2.3.100, Repoman-2.3.22
Signed-off-by: Andreas Sturmlechner <asturm <AT> gentoo.org>
dev-python/mpi4py/Manifest | 1 +
.../mpi4py/files/mpi4py-3.0.3-py38futures.patch | 131 +++++++++++++++++++++
.../mpi4py/files/mpi4py-3.0.3-py38setup.patch | 25 ++++
dev-python/mpi4py/mpi4py-3.0.3.ebuild | 63 ++++++++++
4 files changed, 220 insertions(+)
diff --git a/dev-python/mpi4py/Manifest b/dev-python/mpi4py/Manifest
index 761d398e96d..4e912a3804f 100644
--- a/dev-python/mpi4py/Manifest
+++ b/dev-python/mpi4py/Manifest
@@ -1 +1,2 @@
DIST mpi4py-3.0.2.tar.gz 1429331 BLAKE2B 9e35749a82698ec656553583f01ebd8edbfb3b649c7693a9ff63f9f6abfa3fd41a54cbe4e3a1de55cbaf4dc626602706c776c505d0f5c0d82ebe88f2b4ceeddb SHA512 0a18332fd45e8e80b8dab0761fbaa30444a0d55776af7a2333be17ade827e92d04ac5bb8619ce26937142f344f75de0e5ef6dcb7502f33389716aa9482ddf5ab
+DIST mpi4py-3.0.3.tar.gz 1429389 BLAKE2B 1e8c44b857b417237832682d0b3b5c90d1f1046fd8137d2a63972419ff8ec0e1fd2ebba521e2d2d6ba9f773b7c607370b55d8d75c9afeaca172ac06dd838943c SHA512 041768f753c8188b2560fe92711861780f0d77eda3281433520c98bb1e9b4da6a89c364f2d1c4623868ffbbcfde34ef556198b1bef6fc1c4a9c19cd5e71b546c
diff --git a/dev-python/mpi4py/files/mpi4py-3.0.3-py38futures.patch b/dev-python/mpi4py/files/mpi4py-3.0.3-py38futures.patch
new file mode 100644
index 00000000000..53b3aa36b2f
--- /dev/null
+++ b/dev-python/mpi4py/files/mpi4py-3.0.3-py38futures.patch
@@ -0,0 +1,131 @@
+From 62a7b879051f2029fe46618f8bf9a019bdb96845 Mon Sep 17 00:00:00 2001
+From: Lisandro Dalcin <dalcinl@gmail.com>
+Date: Fri, 25 Oct 2019 12:22:41 +0300
+Subject: [PATCH] mpi4py.futures: Fixes to support Python 3.8
+
+---
+ demo/futures/test_futures.py | 7 +++++--
+ src/mpi4py/futures/__init__.py | 10 ++++++++++
+ src/mpi4py/futures/_base.py | 25 +++++++++++++++++++++++--
+ 3 files changed, 38 insertions(+), 4 deletions(-)
+
+diff --git a/demo/futures/test_futures.py b/demo/futures/test_futures.py
+index 925544d..7e03003 100644
+--- a/demo/futures/test_futures.py
++++ b/demo/futures/test_futures.py
+@@ -1157,7 +1157,9 @@ class ThenTest(unittest.TestCase):
+ def transform(a):
+ try:
+ f = chain.pop(0)
+- f.set_result(transform(a))
++ r = transform(a)
++ f.__init__()
++ f.set_result(r)
+ return f
+ except IndexError:
+ return 42
+@@ -1176,7 +1178,8 @@ class ThenTest(unittest.TestCase):
+ self.assert_(new_f.exception())
+ with self.assertRaises(RuntimeError) as catcher:
+ new_f.result()
+- assert 'Circular future chain detected' in catcher.exception.args[0]
++ self.assert_('Circular future chain detected'
++ in catcher.exception.args[0])
+
+
+ SKIP_POOL_TEST = False
+diff --git a/src/mpi4py/futures/__init__.py b/src/mpi4py/futures/__init__.py
+index d8c00bc..0518d7a 100644
+--- a/src/mpi4py/futures/__init__.py
++++ b/src/mpi4py/futures/__init__.py
+@@ -15,6 +15,14 @@ try:
+ wait,
+ as_completed,
+ )
++ try: # Python 3.7
++ from concurrent.futures import BrokenExecutor
++ except ImportError: # pragma: no cover
++ BrokenExecutor = RuntimeError
++ try: # Python 3.8
++ from concurrent.futures import InvalidStateError
++ except ImportError: # pragma: no cover
++ InvalidStateError = CancelledError.__base__
+ except ImportError: # pragma: no cover
+ from ._base import (
+ FIRST_COMPLETED,
+@@ -22,6 +30,8 @@ except ImportError: # pragma: no cover
+ ALL_COMPLETED,
+ CancelledError,
+ TimeoutError,
++ InvalidStateError,
++ BrokenExecutor,
+ Future,
+ Executor,
+ wait,
+diff --git a/src/mpi4py/futures/_base.py b/src/mpi4py/futures/_base.py
+index cfbd2c0..3eaa512 100644
+--- a/src/mpi4py/futures/_base.py
++++ b/src/mpi4py/futures/_base.py
+@@ -1,4 +1,4 @@
+-# Backport of concurrent.futures._base from Python 3.7
++# Backport of concurrent.futures._base from Python 3.8
+ # pylint: skip-file
+
+ # Copyright 2009 Brian Quinlan. All Rights Reserved.
+@@ -61,6 +61,10 @@ class TimeoutError(Error):
+ """The operation exceeded the given deadline."""
+ pass
+
++class InvalidStateError(Error):
++ """The operation is not allowed in this state."""
++ pass
++
+ class _Waiter(object):
+ """Provides the event that wait() and as_completed() block on."""
+ def __init__(self):
+@@ -414,7 +418,14 @@ class Future(object):
+ if self._state not in [CANCELLED, CANCELLED_AND_NOTIFIED, FINISHED]:
+ self._done_callbacks.append(fn)
+ return
+- fn(self)
++ try:
++ fn(self)
++ except Exception:
++ LOGGER.exception('exception calling callback for %r', self)
++ except BaseException:
++ raise
++ except: # old-style exception objects
++ LOGGER.exception('exception calling callback for %r', self)
+
+ def result(self, timeout=None):
+ """Return the result of the call that the future represents.
+@@ -527,6 +538,8 @@ class Future(object):
+ Should only be used by Executor implementations and unit tests.
+ """
+ with self._condition:
++ if self._state in {CANCELLED, CANCELLED_AND_NOTIFIED, FINISHED}:
++ raise InvalidStateError('{}: {!r}'.format(self._state, self))
+ self._result = result
+ self._state = FINISHED
+ for waiter in self._waiters:
+@@ -540,6 +553,8 @@ class Future(object):
+ Should only be used by Executor implementations and unit tests.
+ """
+ with self._condition:
++ if self._state in {CANCELLED, CANCELLED_AND_NOTIFIED, FINISHED}:
++ raise InvalidStateError('{}: {!r}'.format(self._state, self))
+ self._exception = exception
+ self._state = FINISHED
+ for waiter in self._waiters:
+@@ -625,3 +640,9 @@ class Executor(object):
+ def __exit__(self, exc_type, exc_val, exc_tb):
+ self.shutdown(wait=True)
+ return False
++
++
++class BrokenExecutor(RuntimeError):
++ """
++ Raised when a executor has become non-functional after a severe failure.
++ """
+--
+2.10.5
diff --git a/dev-python/mpi4py/files/mpi4py-3.0.3-py38setup.patch b/dev-python/mpi4py/files/mpi4py-3.0.3-py38setup.patch
new file mode 100644
index 00000000000..877486b4060
--- /dev/null
+++ b/dev-python/mpi4py/files/mpi4py-3.0.3-py38setup.patch
@@ -0,0 +1,25 @@
+From 36e77661b7a879f0ec1eb165c3b5cd0259eb8496 Mon Sep 17 00:00:00 2001
+From: Lisandro Dalcin <dalcinl@gmail.com>
+Date: Sat, 28 Sep 2019 18:10:52 +0300
+Subject: [PATCH] setup: Minor fix for Python 3.8
+
+---
+ setup.py | 2 +-
+ 1 file changed, 1 insertion(+), 1 deletion(-)
+
+diff --git a/setup.py b/setup.py
+index 235b115..9c03c49 100644
+--- a/setup.py
++++ b/setup.py
+@@ -336,7 +336,7 @@ def configure_pyexe(exe, config_cmd):
+ libraries = []
+ library_dirs = []
+ link_args = []
+- if not sysconfig.get_config_var('Py_ENABLE_SHARED'):
++ if pyver >= (3, 8) or not cfg_vars.get('Py_ENABLE_SHARED'):
+ py_version = sysconfig.get_python_version()
+ py_abiflags = getattr(sys, 'abiflags', '')
+ libraries = ['python' + py_version + py_abiflags]
+--
+2.10.5
+
diff --git a/dev-python/mpi4py/mpi4py-3.0.3.ebuild b/dev-python/mpi4py/mpi4py-3.0.3.ebuild
new file mode 100644
index 00000000000..123da6c2686
--- /dev/null
+++ b/dev-python/mpi4py/mpi4py-3.0.3.ebuild
@@ -0,0 +1,63 @@
+# Copyright 1999-2020 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+
+PYTHON_COMPAT=( python3_{6,7,8,9} )
+inherit distutils-r1
+
+DESCRIPTION="Message Passing Interface for Python"
+HOMEPAGE="https://bitbucket.org/mpi4py/ https://pypi.org/project/mpi4py/"
+SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz"
+
+LICENSE="BSD"
+SLOT="0"
+KEYWORDS="~amd64 ~arm ~x86 ~amd64-linux ~x86-linux"
+IUSE="doc examples test"
+
+RESTRICT="!test? ( test )"
+
+RDEPEND="
+ dev-python/cython[${PYTHON_USEDEP}]
+ dev-python/numpy[${PYTHON_USEDEP}]
+ virtual/mpi
+"
+DEPEND="${RDEPEND}
+ test? (
+ dev-python/nose[${PYTHON_USEDEP}]
+ virtual/mpi[romio]
+ )
+"
+
+DISTUTILS_IN_SOURCE_BUILD=1
+
+PATCHES=(
+ "${FILESDIR}/${P}-py38setup.patch"
+ "${FILESDIR}/${P}-py38futures.patch"
+)
+
+python_prepare_all() {
+ # not needed on install
+ rm -vr docs/source || die
+ rm test/test_pickle.py || die # disabled by Gentoo-bug #659348
+ distutils-r1_python_prepare_all
+}
+
+src_compile() {
+ export FAKEROOTKEY=1
+ distutils-r1_src_compile
+}
+
+python_test() {
+ echo "Beginning test phase"
+ pushd "${BUILD_DIR}"/../ &> /dev/null || die
+ mpiexec --use-hwthread-cpus --mca btl tcp,self -n 1 "${PYTHON}" -B ./test/runtests.py -v --exclude="test_msgspec" ||
+ die "Testsuite failed under ${EPYTHON}"
+ popd &> /dev/null || die
+}
+
+python_install_all() {
+ use doc && local HTML_DOCS=( docs/. )
+ use examples && local DOCS=( demo )
+ distutils-r1_python_install_all
+}
^ permalink raw reply related [flat|nested] 2+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: dev-python/mpi4py/files/, dev-python/mpi4py/
@ 2022-02-15 15:28 Michał Górny
0 siblings, 0 replies; 2+ messages in thread
From: Michał Górny @ 2022-02-15 15:28 UTC (permalink / raw
To: gentoo-commits
commit: 7d38783c51a3a6350ffa86c60055c810340de0c0
Author: Michał Górny <mgorny <AT> gentoo <DOT> org>
AuthorDate: Tue Feb 15 15:27:48 2022 +0000
Commit: Michał Górny <mgorny <AT> gentoo <DOT> org>
CommitDate: Tue Feb 15 15:27:48 2022 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=7d38783c
dev-python/mpi4py: Remove old
Signed-off-by: Michał Górny <mgorny <AT> gentoo.org>
dev-python/mpi4py/Manifest | 1 -
.../mpi4py/files/mpi4py-3.0.3-py38futures.patch | 131 ---------------------
.../mpi4py/files/mpi4py-3.0.3-py38setup.patch | 25 ----
dev-python/mpi4py/mpi4py-3.0.3.ebuild | 70 -----------
4 files changed, 227 deletions(-)
diff --git a/dev-python/mpi4py/Manifest b/dev-python/mpi4py/Manifest
index f8d8047eb817..7e2384ad85d3 100644
--- a/dev-python/mpi4py/Manifest
+++ b/dev-python/mpi4py/Manifest
@@ -1,2 +1 @@
-DIST mpi4py-3.0.3.tar.gz 1429389 BLAKE2B 1e8c44b857b417237832682d0b3b5c90d1f1046fd8137d2a63972419ff8ec0e1fd2ebba521e2d2d6ba9f773b7c607370b55d8d75c9afeaca172ac06dd838943c SHA512 041768f753c8188b2560fe92711861780f0d77eda3281433520c98bb1e9b4da6a89c364f2d1c4623868ffbbcfde34ef556198b1bef6fc1c4a9c19cd5e71b546c
DIST mpi4py-3.1.3.tar.gz 2461368 BLAKE2B 3ff7f6519a1ee96249567b1c65401fd1242c433bbb0a55c9d0a9b07f167ec44c71aefc24ac5fb354ceeb591dbfe97a4306f8455bb00559789367e91b78d80c16 SHA512 7a15224692016253120e8e88be1f7201e6f4548c1fb5ed15f04f416000b0d9e259dd8e80c0e237b1a960143e52b4a840d2a541359833387ac12868af1c059cea
diff --git a/dev-python/mpi4py/files/mpi4py-3.0.3-py38futures.patch b/dev-python/mpi4py/files/mpi4py-3.0.3-py38futures.patch
deleted file mode 100644
index 53b3aa36b2fb..000000000000
--- a/dev-python/mpi4py/files/mpi4py-3.0.3-py38futures.patch
+++ /dev/null
@@ -1,131 +0,0 @@
-From 62a7b879051f2029fe46618f8bf9a019bdb96845 Mon Sep 17 00:00:00 2001
-From: Lisandro Dalcin <dalcinl@gmail.com>
-Date: Fri, 25 Oct 2019 12:22:41 +0300
-Subject: [PATCH] mpi4py.futures: Fixes to support Python 3.8
-
----
- demo/futures/test_futures.py | 7 +++++--
- src/mpi4py/futures/__init__.py | 10 ++++++++++
- src/mpi4py/futures/_base.py | 25 +++++++++++++++++++++++--
- 3 files changed, 38 insertions(+), 4 deletions(-)
-
-diff --git a/demo/futures/test_futures.py b/demo/futures/test_futures.py
-index 925544d..7e03003 100644
---- a/demo/futures/test_futures.py
-+++ b/demo/futures/test_futures.py
-@@ -1157,7 +1157,9 @@ class ThenTest(unittest.TestCase):
- def transform(a):
- try:
- f = chain.pop(0)
-- f.set_result(transform(a))
-+ r = transform(a)
-+ f.__init__()
-+ f.set_result(r)
- return f
- except IndexError:
- return 42
-@@ -1176,7 +1178,8 @@ class ThenTest(unittest.TestCase):
- self.assert_(new_f.exception())
- with self.assertRaises(RuntimeError) as catcher:
- new_f.result()
-- assert 'Circular future chain detected' in catcher.exception.args[0]
-+ self.assert_('Circular future chain detected'
-+ in catcher.exception.args[0])
-
-
- SKIP_POOL_TEST = False
-diff --git a/src/mpi4py/futures/__init__.py b/src/mpi4py/futures/__init__.py
-index d8c00bc..0518d7a 100644
---- a/src/mpi4py/futures/__init__.py
-+++ b/src/mpi4py/futures/__init__.py
-@@ -15,6 +15,14 @@ try:
- wait,
- as_completed,
- )
-+ try: # Python 3.7
-+ from concurrent.futures import BrokenExecutor
-+ except ImportError: # pragma: no cover
-+ BrokenExecutor = RuntimeError
-+ try: # Python 3.8
-+ from concurrent.futures import InvalidStateError
-+ except ImportError: # pragma: no cover
-+ InvalidStateError = CancelledError.__base__
- except ImportError: # pragma: no cover
- from ._base import (
- FIRST_COMPLETED,
-@@ -22,6 +30,8 @@ except ImportError: # pragma: no cover
- ALL_COMPLETED,
- CancelledError,
- TimeoutError,
-+ InvalidStateError,
-+ BrokenExecutor,
- Future,
- Executor,
- wait,
-diff --git a/src/mpi4py/futures/_base.py b/src/mpi4py/futures/_base.py
-index cfbd2c0..3eaa512 100644
---- a/src/mpi4py/futures/_base.py
-+++ b/src/mpi4py/futures/_base.py
-@@ -1,4 +1,4 @@
--# Backport of concurrent.futures._base from Python 3.7
-+# Backport of concurrent.futures._base from Python 3.8
- # pylint: skip-file
-
- # Copyright 2009 Brian Quinlan. All Rights Reserved.
-@@ -61,6 +61,10 @@ class TimeoutError(Error):
- """The operation exceeded the given deadline."""
- pass
-
-+class InvalidStateError(Error):
-+ """The operation is not allowed in this state."""
-+ pass
-+
- class _Waiter(object):
- """Provides the event that wait() and as_completed() block on."""
- def __init__(self):
-@@ -414,7 +418,14 @@ class Future(object):
- if self._state not in [CANCELLED, CANCELLED_AND_NOTIFIED, FINISHED]:
- self._done_callbacks.append(fn)
- return
-- fn(self)
-+ try:
-+ fn(self)
-+ except Exception:
-+ LOGGER.exception('exception calling callback for %r', self)
-+ except BaseException:
-+ raise
-+ except: # old-style exception objects
-+ LOGGER.exception('exception calling callback for %r', self)
-
- def result(self, timeout=None):
- """Return the result of the call that the future represents.
-@@ -527,6 +538,8 @@ class Future(object):
- Should only be used by Executor implementations and unit tests.
- """
- with self._condition:
-+ if self._state in {CANCELLED, CANCELLED_AND_NOTIFIED, FINISHED}:
-+ raise InvalidStateError('{}: {!r}'.format(self._state, self))
- self._result = result
- self._state = FINISHED
- for waiter in self._waiters:
-@@ -540,6 +553,8 @@ class Future(object):
- Should only be used by Executor implementations and unit tests.
- """
- with self._condition:
-+ if self._state in {CANCELLED, CANCELLED_AND_NOTIFIED, FINISHED}:
-+ raise InvalidStateError('{}: {!r}'.format(self._state, self))
- self._exception = exception
- self._state = FINISHED
- for waiter in self._waiters:
-@@ -625,3 +640,9 @@ class Executor(object):
- def __exit__(self, exc_type, exc_val, exc_tb):
- self.shutdown(wait=True)
- return False
-+
-+
-+class BrokenExecutor(RuntimeError):
-+ """
-+ Raised when a executor has become non-functional after a severe failure.
-+ """
---
-2.10.5
diff --git a/dev-python/mpi4py/files/mpi4py-3.0.3-py38setup.patch b/dev-python/mpi4py/files/mpi4py-3.0.3-py38setup.patch
deleted file mode 100644
index 877486b40604..000000000000
--- a/dev-python/mpi4py/files/mpi4py-3.0.3-py38setup.patch
+++ /dev/null
@@ -1,25 +0,0 @@
-From 36e77661b7a879f0ec1eb165c3b5cd0259eb8496 Mon Sep 17 00:00:00 2001
-From: Lisandro Dalcin <dalcinl@gmail.com>
-Date: Sat, 28 Sep 2019 18:10:52 +0300
-Subject: [PATCH] setup: Minor fix for Python 3.8
-
----
- setup.py | 2 +-
- 1 file changed, 1 insertion(+), 1 deletion(-)
-
-diff --git a/setup.py b/setup.py
-index 235b115..9c03c49 100644
---- a/setup.py
-+++ b/setup.py
-@@ -336,7 +336,7 @@ def configure_pyexe(exe, config_cmd):
- libraries = []
- library_dirs = []
- link_args = []
-- if not sysconfig.get_config_var('Py_ENABLE_SHARED'):
-+ if pyver >= (3, 8) or not cfg_vars.get('Py_ENABLE_SHARED'):
- py_version = sysconfig.get_python_version()
- py_abiflags = getattr(sys, 'abiflags', '')
- libraries = ['python' + py_version + py_abiflags]
---
-2.10.5
-
diff --git a/dev-python/mpi4py/mpi4py-3.0.3.ebuild b/dev-python/mpi4py/mpi4py-3.0.3.ebuild
deleted file mode 100644
index 2a020662ac41..000000000000
--- a/dev-python/mpi4py/mpi4py-3.0.3.ebuild
+++ /dev/null
@@ -1,70 +0,0 @@
-# Copyright 1999-2021 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-PYTHON_COMPAT=( python3_{8..10} )
-inherit distutils-r1
-
-DESCRIPTION="Message Passing Interface for Python"
-HOMEPAGE="https://bitbucket.org/mpi4py/ https://pypi.org/project/mpi4py/"
-SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz"
-
-LICENSE="BSD"
-SLOT="0"
-KEYWORDS="amd64 ~arm x86 ~amd64-linux ~x86-linux"
-IUSE="doc examples test"
-
-RESTRICT="!test? ( test )"
-
-RDEPEND="
- dev-python/cython[${PYTHON_USEDEP}]
- dev-python/numpy[${PYTHON_USEDEP}]
- virtual/mpi
-"
-DEPEND="${RDEPEND}
- test? (
- dev-python/nose[${PYTHON_USEDEP}]
- virtual/mpi[romio]
- )
-"
-
-DISTUTILS_IN_SOURCE_BUILD=1
-
-PATCHES=(
- "${FILESDIR}/${P}-py38setup.patch"
- "${FILESDIR}/${P}-py38futures.patch"
-)
-
-src_prepare() {
- sed -e 's/++Py_REFCNT/Py_INCREF/' \
- -e 's/--Py_REFCNT/Py_DECREF/' \
- -i src/*.c || die
- distutils-r1_src_prepare
-}
-
-python_prepare_all() {
- # not needed on install
- rm -vr docs/source || die
- rm test/test_pickle.py || die # disabled by Gentoo-bug #659348
- distutils-r1_python_prepare_all
-}
-
-src_compile() {
- export FAKEROOTKEY=1
- distutils-r1_src_compile
-}
-
-python_test() {
- echo "Beginning test phase"
- pushd "${BUILD_DIR}"/../ &> /dev/null || die
- mpiexec --use-hwthread-cpus --mca btl tcp,self -n 1 "${PYTHON}" -B ./test/runtests.py -v --exclude="test_msgspec" ||
- die "Testsuite failed under ${EPYTHON}"
- popd &> /dev/null || die
-}
-
-python_install_all() {
- use doc && local HTML_DOCS=( docs/. )
- use examples && local DOCS=( demo )
- distutils-r1_python_install_all
-}
^ permalink raw reply related [flat|nested] 2+ messages in thread
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