From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by finch.gentoo.org (Postfix) with ESMTPS id C971B138359 for ; Wed, 6 May 2020 18:22:42 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id 1A5F1E03EC; Wed, 6 May 2020 18:22:42 +0000 (UTC) Received: from smtp.gentoo.org (woodpecker.gentoo.org [IPv6:2001:470:ea4a:1:5054:ff:fec7:86e4]) (using TLSv1.2 with cipher ECDHE-RSA-AES128-GCM-SHA256 (128/128 bits)) (No client certificate requested) by pigeon.gentoo.org (Postfix) with ESMTPS id 015E0E03EC for ; Wed, 6 May 2020 18:22:41 +0000 (UTC) Received: from oystercatcher.gentoo.org (unknown [IPv6:2a01:4f8:202:4333:225:90ff:fed9:fc84]) (using TLSv1.2 with cipher ECDHE-RSA-AES128-GCM-SHA256 (128/128 bits)) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id 23E8E34F366 for ; Wed, 6 May 2020 18:22:40 +0000 (UTC) Received: from localhost.localdomain (localhost [IPv6:::1]) by oystercatcher.gentoo.org (Postfix) with ESMTP id 9816B1BD for ; Wed, 6 May 2020 18:22:38 +0000 (UTC) From: "Martin Mokrejs" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Martin Mokrejs" Message-ID: <1588789340.e29df37c8b9b02f3749a57c2075bed05f0a71260.mmokrejs@gentoo> Subject: [gentoo-commits] proj/sci:master commit in: sci-biology/pybedtools/ X-VCS-Repository: proj/sci X-VCS-Files: sci-biology/pybedtools/pybedtools-0.8.0.ebuild X-VCS-Directories: sci-biology/pybedtools/ X-VCS-Committer: mmokrejs X-VCS-Committer-Name: Martin Mokrejs X-VCS-Revision: e29df37c8b9b02f3749a57c2075bed05f0a71260 X-VCS-Branch: master Date: Wed, 6 May 2020 18:22:38 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Auto-Response-Suppress: DR, RN, NRN, OOF, AutoReply X-Archives-Salt: 99d3bc76-ec02-46ca-a0df-aaea7be8e835 X-Archives-Hash: 470a3d5e2b518904c01ff1be6ef77ba7 commit: e29df37c8b9b02f3749a57c2075bed05f0a71260 Author: Martin Mokrejs gmail com> AuthorDate: Wed May 6 18:22:00 2020 +0000 Commit: Martin Mokrejs fold natur cuni cz> CommitDate: Wed May 6 18:22:20 2020 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=e29df37c sci-biology/pybedtools: respect minimal and doc USE flags Installation of the to be generated doc pages is not tested as I am blocked by bug #721306. Probably some dir needs to be recursively installed. Package-Manager: Portage-2.3.95, Repoman-2.3.22 Signed-off-by: Martin Mokrejs gmail.com> sci-biology/pybedtools/pybedtools-0.8.0.ebuild | 7 +++++-- 1 file changed, 5 insertions(+), 2 deletions(-) diff --git a/sci-biology/pybedtools/pybedtools-0.8.0.ebuild b/sci-biology/pybedtools/pybedtools-0.8.0.ebuild index cd444a09e..9d4dc23c0 100644 --- a/sci-biology/pybedtools/pybedtools-0.8.0.ebuild +++ b/sci-biology/pybedtools/pybedtools-0.8.0.ebuild @@ -14,15 +14,18 @@ SRC_URI="https://github.com/daler/pybedtools/archive/v${PV}.tar.gz -> ${P}.tar.g LICENSE="MIT" SLOT="0" KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" -IUSE="" +IUSE="doc minimal" RDEPEND=" sci-biology/bedtools - sci-biology/pysam" + sci-biology/pysam + !minimal? ( sci-libs/htslib ) + doc? ( dev-python/sphinx )" DEPEND="${RDEPEND} dev-python/cython[${PYTHON_USEDEP}]" src_compile(){ python setup.py cythonize default + use doc && cd docs && emake html }