[gentoo-commits] repo/gentoo:master commit in: dev-python/numpy-python2/

["Pacho Ramos" <pacho@gentoo.org>]

commit:     57f3bb19cd470f5bad05a4379d83eea7326c3d62
Author:     Pacho Ramos <pacho <AT> gentoo <DOT> org>
AuthorDate: Fri May  1 16:56:57 2020 +0000
Commit:     Pacho Ramos <pacho <AT> gentoo <DOT> org>
CommitDate: Fri May  1 16:56:57 2020 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=57f3bb19

dev-python/numpy-python2: Bump to 1.16.6

Package-Manager: Portage-2.3.96, Repoman-2.3.22
Signed-off-by: Pacho Ramos <pacho <AT> gentoo.org>

 dev-python/numpy-python2/Manifest                  |   4 +
 .../numpy-python2/numpy-python2-1.16.6.ebuild      | 172 +++++++++++++++++++++
 2 files changed, 176 insertions(+)

diff --git a/dev-python/numpy-python2/Manifest b/dev-python/numpy-python2/Manifest
index 5d698101579..6f961d3c98b 100644
--- a/dev-python/numpy-python2/Manifest
+++ b/dev-python/numpy-python2/Manifest
@@ -1,4 +1,8 @@
 DIST numpy-1.16.5.zip 5138208 BLAKE2B f5511650e66939a6ce21cfad7874aecdeb6c07a70b32419a808956e42c7819d82bb364f1632da91b4d8a5237001c8ae3cbdcac10651fa0acca9558bdeafb5437 SHA512 6dd790ff57fdb7e7b0bddb47ea2b70b2667edefe632548ec68934e12a16af4a51bed9726e495c4993aad4c448dc4a204d0a087577d43dcfc9fa0164eb1d4b898
+DIST numpy-1.16.6.zip 5143340 BLAKE2B 2c31473551aaf00e7d3175ce37463ce0f14ff3e77bdeb71c9f85ede634880e014d4a941b1f1c1bb107f1b01217d6a68cc71d188b7ae3edf833a6fd6a9a746acb SHA512 c219841cc804c194a38b8e046b83265b8b7a35be8f33d68561ef17b085465dd11bd1e84fe1baea809af0efb09a9b13283f13728d125fcdd2221c30ec23fd0a50
 DIST numpy-html-1.16.4.zip 12097069 BLAKE2B db1f897342fbc80a761fbaee7b0eee3761dbfa04ef6c46a137bb2392caaec8256580467ce06498cceeada2639151a1ec75dafab484d64cb897c008727d6d32a5 SHA512 c44c5e1e0cb22f9dd46fe9e302030292d85e567456178fee296746a414271634e906509fb6665ac63fbfebdd13c5383574f0aa47b4fbc639063da31addc3316a
+DIST numpy-html-1.16.6.zip 12190671 BLAKE2B c24586a40bb05fdb2f2f092778e01f7c60b17d2c695d0fb8577e988778ad80b711edf7e067a20c699946344a50febc152ab586f4653b80bcbeb489650dafbd1b SHA512 ad25e7b91b992af78a6748f12d6fcbe153d96cb8667d5dc4a6b6b2a6105e24a11c32cbf63dd3314ed4aa9b65a55ec5b3a51cd7763af5dfdd133510ddd6e4ed16
 DIST numpy-ref-1.16.4.pdf 5176571 BLAKE2B 9a875ebd1473b241d463d810a6d191581aef961158f2f82959671b554ace3ad482795e4f3e1cb7dd4632cff926c1e864c675a7624fb0f4e4f297948bf50f0564 SHA512 983ba0f34a70c011886bdbc9fd8f3f75a3a967ca29217acc76fa46e7da391296a5628c9a557ac76efb393271abfb8ee4f376d401c1cc1e5c30622e54b9325d09
+DIST numpy-ref-1.16.6.pdf 5183393 BLAKE2B e92a8a7a32ab45d2fdfd6760e62d8d9b5b3f89e202a29e18ef1b6ce49ec56bbfea0e48e0c47b4c35cad02783fa1db33726a0f4fed4a50b0d8ed84babced8b79e SHA512 66dbb684f4140874d19826b479c781e16e7992a7cec46137f785f9a8fa071911966fbb3932cbcdcd040bbb5fbefac8c96d511ef623a57fc268aac9331aae8d22
 DIST numpy-user-1.16.4.pdf 596203 BLAKE2B da3ad1f0ec1c965d20656f73a970911cbb58efa73a5df89e2e6485e0dd763f483e35eea1395ac919bf35d496fb216cee954fc5d31edebc1796a24a2a7a2d12b9 SHA512 3083008547213bfa98ffa5cd8e2cea13f6947f42d83aef61502a2a852b0d5f27d727c76b42d281d7a2f4f76c78e88b12ee3d9b164b39fe1f0213ace7097357d6
+DIST numpy-user-1.16.6.pdf 621980 BLAKE2B ec735ff7057935d3a7f33f291792b74618f5dc10ee091c434f49c77e58f683821af9cce46286564ac9b8cb0111498f9d1b657d0c343e0a4313c3f895982dca8b SHA512 ff03719c91707a39b4bc388558838f72d4412f34dd0b07f2a0b2cf8fedac6811e8789985013cf1f23c7a650f115655f71e9cadc51ef4e7ae6e49d7552752409a

diff --git a/dev-python/numpy-python2/numpy-python2-1.16.6.ebuild b/dev-python/numpy-python2/numpy-python2-1.16.6.ebuild
new file mode 100644
index 00000000000..6ef01ffe4ba
--- /dev/null
+++ b/dev-python/numpy-python2/numpy-python2-1.16.6.ebuild
@@ -0,0 +1,172 @@
+# Copyright 1999-2020 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI="7"
+
+PYTHON_COMPAT=( python2_7 )
+PYTHON_REQ_USE="threads(+)"
+
+FORTRAN_NEEDED=lapack
+
+inherit distutils-r1 flag-o-matic fortran-2 multiprocessing toolchain-funcs
+
+MY_PN="numpy"
+DOC_PV="1.16.6"
+
+DESCRIPTION="Fast array and numerical python library"
+HOMEPAGE="https://www.numpy.org"
+SRC_URI="
+	mirror://pypi/${MY_PN:0:1}/${MY_PN}/${MY_PN}-${PV}.zip
+	doc? (
+		https://numpy.org/doc/$(ver_cut 1-2 ${DOC_PV})/numpy-html.zip -> numpy-html-${DOC_PV}.zip
+		https://numpy.org/doc/$(ver_cut 1-2 ${DOC_PV})/numpy-ref.pdf -> numpy-ref-${DOC_PV}.pdf
+		https://numpy.org/doc/$(ver_cut 1-2 ${DOC_PV})/numpy-user.pdf -> numpy-user-${DOC_PV}.pdf
+	)"
+LICENSE="BSD"
+SLOT="0"
+KEYWORDS="~alpha ~amd64 ~arm ~arm64 ~hppa ~ia64 ~mips ~ppc ~ppc64 ~s390 ~sparc ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~x64-macos ~x86-macos ~sparc-solaris ~x64-solaris ~x86-solaris"
+IUSE="doc lapack test"
+RESTRICT="!test? ( test )"
+
+RDEPEND="
+	!<dev-python/numpy-1.17
+	lapack? (
+		virtual/cblas
+		virtual/lapack
+	)
+"
+DEPEND="${RDEPEND}"
+
+BDEPEND="
+	app-arch/unzip
+	dev-python/setuptools[${PYTHON_USEDEP}]
+	lapack? ( virtual/pkgconfig )
+	test? (
+		dev-python/pytest[${PYTHON_USEDEP}]
+	)
+"
+
+S="${WORKDIR}/${MY_PN}-${PV}"
+
+PATCHES=(
+	"${FILESDIR}"/${MY_PN}-1.15.4-no-hardcode-blas.patch
+	"${FILESDIR}"/numpy-1.16.5-setup.py-install-skip-build-fails.patch
+)
+
+src_unpack() {
+	default
+	if use doc; then
+		unzip -qo "${DISTDIR}"/numpy-html-${DOC_PV}.zip -d html || die
+	fi
+}
+
+pc_incdir() {
+	$(tc-getPKG_CONFIG) --cflags-only-I $@ | \
+		sed -e 's/^-I//' -e 's/[ ]*-I/:/g' -e 's/[ ]*$//' -e 's|^:||'
+}
+
+pc_libdir() {
+	$(tc-getPKG_CONFIG) --libs-only-L $@ | \
+		sed -e 's/^-L//' -e 's/[ ]*-L/:/g' -e 's/[ ]*$//' -e 's|^:||'
+}
+
+pc_libs() {
+	$(tc-getPKG_CONFIG) --libs-only-l $@ | \
+		sed -e 's/[ ]-l*\(pthread\|m\)\([ ]\|$\)//g' \
+		-e 's/^-l//' -e 's/[ ]*-l/,/g' -e 's/[ ]*$//' \
+		| tr ',' '\n' | sort -u | tr '\n' ',' | sed -e 's|,$||'
+}
+
+python_prepare_all() {
+	if use lapack; then
+		append-ldflags "$($(tc-getPKG_CONFIG) --libs-only-other cblas lapack)"
+		local incdir="${EPREFIX}"/usr/include
+		local libdir="${EPREFIX}"/usr/$(get_libdir)
+		cat >> site.cfg <<-EOF || die
+			[blas]
+			include_dirs = $(pc_incdir cblas):${incdir}
+			library_dirs = $(pc_libdir cblas blas):${libdir}
+			blas_libs = $(pc_libs cblas blas)
+			[lapack]
+			library_dirs = $(pc_libdir lapack):${libdir}
+			lapack_libs = $(pc_libs lapack)
+		EOF
+	else
+		export {ATLAS,PTATLAS,BLAS,LAPACK,MKL}=None
+	fi
+
+	export CC="$(tc-getCC) ${CFLAGS}"
+
+	append-flags -fno-strict-aliasing
+
+	# See progress in http://projects.scipy.org/scipy/numpy/ticket/573
+	# with the subtle difference that we don't want to break Darwin where
+	# -shared is not a valid linker argument
+	if [[ ${CHOST} != *-darwin* ]]; then
+		append-ldflags -shared
+	fi
+
+	# only one fortran to link with:
+	# linking with cblas and lapack library will force
+	# autodetecting and linking to all available fortran compilers
+	append-fflags -fPIC
+	if use lapack; then
+		NUMPY_FCONFIG="config_fc --noopt --noarch"
+		# workaround bug 335908
+		[[ $(tc-getFC) == *gfortran* ]] && NUMPY_FCONFIG+=" --fcompiler=gnu95"
+	fi
+
+	# don't version f2py, we will handle it.
+	sed -i -e '/f2py_exe/s: + os\.path.*$::' numpy/f2py/setup.py || die
+
+	# disable fuzzed tests
+	find numpy/*/tests -name '*.py' -exec sed -i \
+		-e 's:def \(.*_fuzz\):def _\1:' {} + || die
+	# very memory- and disk-hungry
+	sed -i -e 's:test_large_zip:_&:' numpy/lib/tests/test_io.py || die
+
+	distutils-r1_python_prepare_all
+}
+
+python_compile() {
+	export MAKEOPTS=-j1 #660754
+
+	local python_makeopts_jobs=""
+	python_is_python3 || python_makeopts_jobs="-j $(makeopts_jobs)"
+	distutils-r1_python_compile \
+		${python_makeopts_jobs} \
+		${NUMPY_FCONFIG}
+}
+
+python_test() {
+	distutils_install_for_testing --single-version-externally-managed \
+		--record "${TMPDIR}/record.txt" ${NUMPY_FCONFIG}
+
+	cd "${TMPDIR}" || die
+
+	"${EPYTHON}" -c "
+import numpy, sys
+r = numpy.test(label='full', verbose=3)
+sys.exit(0 if r else 1)" || die "Tests fail with ${EPYTHON}"
+}
+
+python_install() {
+	# https://github.com/numpy/numpy/issues/16005
+	local mydistutilsargs=( build_src )
+	distutils-r1_python_install ${NUMPY_FCONFIG}
+	python_optimize
+}
+
+python_install_all() {
+	local DOCS=( THANKS.txt )
+
+	if use doc; then
+		local HTML_DOCS=( "${WORKDIR}"/html/. )
+		DOCS+=( "${DISTDIR}"/${MY_PN}-{user,ref}-${DOC_PV}.pdf )
+	fi
+
+	distutils-r1_python_install_all
+
+	# Let latest version to provide f2py link
+	rm "${ED}"/usr/bin/f2py || die
+}