From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by finch.gentoo.org (Postfix) with ESMTPS id 3C178138350 for ; Thu, 2 Apr 2020 04:11:05 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id 63476E0C0E; Thu, 2 Apr 2020 04:11:04 +0000 (UTC) Received: from smtp.gentoo.org (dev.gentoo.org [IPv6:2001:470:ea4a:1:5054:ff:fec7:86e4]) (using TLSv1.2 with cipher ECDHE-RSA-AES128-GCM-SHA256 (128/128 bits)) (No client certificate requested) by pigeon.gentoo.org (Postfix) with ESMTPS id 01955E0C0E for ; Thu, 2 Apr 2020 04:11:03 +0000 (UTC) Received: from oystercatcher.gentoo.org (unknown [IPv6:2a01:4f8:202:4333:225:90ff:fed9:fc84]) (using TLSv1.2 with cipher ECDHE-RSA-AES128-GCM-SHA256 (128/128 bits)) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id 50A5434FC53 for ; Thu, 2 Apr 2020 04:11:02 +0000 (UTC) Received: from localhost.localdomain (localhost [IPv6:::1]) by oystercatcher.gentoo.org (Postfix) with ESMTP id 10B74150 for ; Thu, 2 Apr 2020 04:11:00 +0000 (UTC) From: "Horea Christian" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Horea Christian" Message-ID: <1585800647.ca73ecf31bb85b7a3a976df75fbdbec29627ff12.chymera@gentoo> Subject: [gentoo-commits] proj/sci:master commit in: sci-biology/bruker2nifti/ X-VCS-Repository: proj/sci X-VCS-Files: sci-biology/bruker2nifti/bruker2nifti-1.0.4.ebuild sci-biology/bruker2nifti/metadata.xml X-VCS-Directories: sci-biology/bruker2nifti/ X-VCS-Committer: chymera X-VCS-Committer-Name: Horea Christian X-VCS-Revision: ca73ecf31bb85b7a3a976df75fbdbec29627ff12 X-VCS-Branch: master Date: Thu, 2 Apr 2020 04:11:00 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Auto-Response-Suppress: DR, RN, NRN, OOF, AutoReply X-Archives-Salt: 191cedda-342f-4226-aeb1-1516343d3b4d X-Archives-Hash: 9f6b1edbf73aac7911d5cd8ea85d8212 commit: ca73ecf31bb85b7a3a976df75fbdbec29627ff12 Author: Horea Christian chymera eu> AuthorDate: Thu Apr 2 04:10:47 2020 +0000 Commit: Horea Christian gmail com> CommitDate: Thu Apr 2 04:10:47 2020 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=ca73ecf3 sci-biology/bruker2nifti: new package Python Bruker ParaVision to NIfTI converter Package-Manager: Portage-2.3.96, Repoman-2.3.22 Signed-off-by: Horea Christian chymera.eu> sci-biology/bruker2nifti/bruker2nifti-1.0.4.ebuild | 31 ++++++++++++++++++++++ sci-biology/bruker2nifti/metadata.xml | 16 +++++++++++ 2 files changed, 47 insertions(+) diff --git a/sci-biology/bruker2nifti/bruker2nifti-1.0.4.ebuild b/sci-biology/bruker2nifti/bruker2nifti-1.0.4.ebuild new file mode 100644 index 000000000..2297139a2 --- /dev/null +++ b/sci-biology/bruker2nifti/bruker2nifti-1.0.4.ebuild @@ -0,0 +1,31 @@ +# Copyright 1999-2020 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=7 + +PYTHON_COMPAT=( python3_{6,7} ) + +inherit distutils-r1 + +DESCRIPTION="Medical image converter, from raw Bruker ParaVision to NIfTI" +HOMEPAGE="https://github.com/SebastianoF/bruker2nifti" +SRC_URI="https://github.com/SebastianoF/bruker2nifti/archive/v${PV}.tar.gz -> ${P}.tar.gz" + +LICENSE="MIT" +SLOT="0" +KEYWORDS="~amd64" + +RDEPEND=" + dev-python/numpy[${PYTHON_USEDEP}] + sci-libs/nibabel[${PYTHON_USEDEP}] + " + +#S="${WORKDIR}/Bru2Nii-${PV}" + +python_prepare_all() { + sed -i -e "s/packages=find_packages()/packages=find_packages(exclude=('test',))/g"\ + setup.py || die + distutils-r1_python_prepare_all +} + +distutils_enable_tests pytest diff --git a/sci-biology/bruker2nifti/metadata.xml b/sci-biology/bruker2nifti/metadata.xml new file mode 100644 index 000000000..d67826b4d --- /dev/null +++ b/sci-biology/bruker2nifti/metadata.xml @@ -0,0 +1,16 @@ + + + + + sci@gentoo.org + Gentoo Science Project + + + Bruker2nifti is an open source medical image format converter from + raw Bruker ParaVision to NifTi, without any intermediate step through + the DICOM standard format. + + + SebastianoF/bruker2nifti + +