From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by finch.gentoo.org (Postfix) with ESMTPS id 62E70138350 for ; Sun, 8 Mar 2020 06:49:24 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id 80D01E0798; Sun, 8 Mar 2020 06:49:23 +0000 (UTC) Received: from smtp.gentoo.org (dev.gentoo.org [IPv6:2001:470:ea4a:1:5054:ff:fec7:86e4]) (using TLSv1.2 with cipher ECDHE-RSA-AES128-GCM-SHA256 (128/128 bits)) (No client certificate requested) by pigeon.gentoo.org (Postfix) with ESMTPS id 74CB6E0798 for ; Sun, 8 Mar 2020 06:49:22 +0000 (UTC) Received: from oystercatcher.gentoo.org (oystercatcher.gentoo.org [148.251.78.52]) (using TLSv1.2 with cipher ECDHE-RSA-AES128-GCM-SHA256 (128/128 bits)) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id B389C34F407 for ; Sun, 8 Mar 2020 06:49:20 +0000 (UTC) Received: from localhost.localdomain (localhost [IPv6:::1]) by oystercatcher.gentoo.org (Postfix) with ESMTP id 2134512B for ; Sun, 8 Mar 2020 06:49:19 +0000 (UTC) From: "Benda XU" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Benda XU" Message-ID: <1583650148.27d655b364e26cfb971d655a691f0ffaef96e8f8.heroxbd@gentoo> Subject: [gentoo-commits] repo/gentoo:master commit in: sci-libs/hdf5/ X-VCS-Repository: repo/gentoo X-VCS-Files: sci-libs/hdf5/hdf5-1.10.5-r1.ebuild sci-libs/hdf5/metadata.xml X-VCS-Directories: sci-libs/hdf5/ X-VCS-Committer: heroxbd X-VCS-Committer-Name: Benda XU X-VCS-Revision: 27d655b364e26cfb971d655a691f0ffaef96e8f8 X-VCS-Branch: master Date: Sun, 8 Mar 2020 06:49:19 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Auto-Response-Suppress: DR, RN, NRN, OOF, AutoReply X-Archives-Salt: fe83c6f4-21ac-4b25-a074-615783fc3522 X-Archives-Hash: ba19a2096037deb822badb855607000f commit: 27d655b364e26cfb971d655a691f0ffaef96e8f8 Author: Alessandro Barbieri gmail com> AuthorDate: Mon Mar 2 07:50:25 2020 +0000 Commit: Benda XU gentoo org> CommitDate: Sun Mar 8 06:49:08 2020 +0000 URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=27d655b3 sci-libs/hdf5: add unsupported useflag this will allow unsupported combinations of useflags such as MPI + CXX. link mpi when using mpi. Closes: https://bugs.gentoo.org/710986 Closes: https://github.com/gentoo/gentoo/pull/14821 Package-Manager: Portage-2.3.89, Repoman-2.3.20 Signed-off-by: Alessandro Barbieri gmail.com> Signed-off-by: Benda Xu gentoo.org> sci-libs/hdf5/hdf5-1.10.5-r1.ebuild | 106 ++++++++++++++++++++++++++++++++++++ sci-libs/hdf5/metadata.xml | 1 + 2 files changed, 107 insertions(+) diff --git a/sci-libs/hdf5/hdf5-1.10.5-r1.ebuild b/sci-libs/hdf5/hdf5-1.10.5-r1.ebuild new file mode 100644 index 00000000000..ef906aa6eef --- /dev/null +++ b/sci-libs/hdf5/hdf5-1.10.5-r1.ebuild @@ -0,0 +1,106 @@ +# Copyright 1999-2020 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI="7" + +FORTRAN_NEEDED="fortran" + +inherit autotools eutils fortran-2 flag-o-matic toolchain-funcs multilib prefix + +MY_P="${PN}-${PV/_p/-patch}" +MAJOR_P="${PN}-$(ver_cut 1-2)" + +DESCRIPTION="General purpose library and file format for storing scientific data" +HOMEPAGE="http://www.hdfgroup.org/HDF5/" +SRC_URI="http://www.hdfgroup.org/ftp/HDF5/releases/${MAJOR_P}/${MY_P}/src/${MY_P}.tar.bz2" + +LICENSE="NCSA-HDF" +SLOT="0/${PV%%_p*}" +KEYWORDS="~alpha ~amd64 ~arm ~arm64 ~ia64 ~ppc ~ppc64 ~sparc ~x86 ~amd64-linux ~x86-linux" +IUSE="cxx debug examples fortran +hl mpi szip threads unsupported zlib" + +REQUIRED_USE=" + !unsupported? ( + ?? ( cxx mpi ) + threads? ( !cxx !mpi !fortran !hl ) + )" +RDEPEND=" + mpi? ( virtual/mpi[romio] ) + szip? ( virtual/szip ) + zlib? ( sys-libs/zlib:0= ) +" +DEPEND="${RDEPEND} + sys-devel/libtool:2 + >=sys-devel/autoconf-2.69 +" +S="${WORKDIR}/${MY_P}" + +PATCHES=( + "${FILESDIR}/${PN}-1.8.9-static_libgfortran.patch" + "${FILESDIR}/${PN}-1.8.9-mpicxx.patch" + "${FILESDIR}/${PN}-1.8.13-no-messing-ldpath.patch" +) + +pkg_setup() { + tc-export CXX CC AR # workaround for bug 285148 + use fortran && fortran-2_pkg_setup + + if use mpi; then + if has_version 'sci-libs/hdf5[-mpi]'; then + ewarn "Installing hdf5 with mpi enabled with a previous hdf5 with mpi disabled may fail." + ewarn "Try to uninstall the current hdf5 prior to enabling mpi support." + fi + export CC="mpicc" + use fortran && export FC="mpif90" + append-ldflags -lmpi + elif has_version 'sci-libs/hdf5[mpi]'; then + ewarn "Installing hdf5 with mpi disabled while having hdf5 installed with mpi enabled may fail." + ewarn "Try to uninstall the current hdf5 prior to disabling mpi support." + fi +} + +src_prepare() { + # respect gentoo examples directory + sed \ + -e "s:hdf5_examples:doc/${PF}/examples:g" \ + -i $(find . -name Makefile.am) $(find . -name "run*.sh.in") || die + sed \ + -e '/docdir/d' \ + -i config/commence.am || die + if ! use examples; then + sed -e '/^install:/ s/install-examples//' \ + -i Makefile.am || die #409091 + fi + # enable shared libs by default for h5cc config utility + sed -i -e "s/SHLIB:-no/SHLIB:-yes/g" tools/src/misc/h5cc.in || die + hprefixify m4/libtool.m4 + + default + eautomake +} + +src_configure() { + local myconf=( + --disable-static + --enable-deprecated-symbols + --enable-build-mode=$(usex debug debug production) + $(use_enable cxx) + $(use_enable debug codestack) + $(use_enable fortran) + $(use_enable hl) + $(use_enable mpi parallel) + $(use_enable threads threadsafe) + $(use_enable unsupported) + $(use_with szip szlib) + $(use_with threads pthread) + $(use_with zlib) + ) + econf "${myconf[@]}" +} + +src_install() { + default + + # no static archives + find "${D}" -name '*.la' -delete || die +} diff --git a/sci-libs/hdf5/metadata.xml b/sci-libs/hdf5/metadata.xml index 040542a30ae..2fa4f45de1b 100644 --- a/sci-libs/hdf5/metadata.xml +++ b/sci-libs/hdf5/metadata.xml @@ -13,5 +13,6 @@ Enable high level API (https://support.hdfgroup.org/HDF5/doc/HL/index.html) + Enable unsupported combinations of configuration options