* [gentoo-commits] repo/gentoo:master commit in: sci-libs/scipy-python2/
@ 2020-01-28 21:30 Michał Górny
0 siblings, 0 replies; 2+ messages in thread
From: Michał Górny @ 2020-01-28 21:30 UTC (permalink / raw
To: gentoo-commits
commit: 0f29cb1a064d642e5d62882785e4772d78610dfc
Author: Michał Górny <mgorny <AT> gentoo <DOT> org>
AuthorDate: Tue Jan 28 20:46:05 2020 +0000
Commit: Michał Górny <mgorny <AT> gentoo <DOT> org>
CommitDate: Tue Jan 28 21:30:09 2020 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=0f29cb1a
sci-libs/scipy-python2: Split from scipy
Signed-off-by: Michał Górny <mgorny <AT> gentoo.org>
sci-libs/scipy-python2/Manifest | 1 +
sci-libs/scipy-python2/metadata.xml | 23 ++++
sci-libs/scipy-python2/scipy-python2-1.1.0.ebuild | 128 ++++++++++++++++++++++
3 files changed, 152 insertions(+)
diff --git a/sci-libs/scipy-python2/Manifest b/sci-libs/scipy-python2/Manifest
new file mode 100644
index 00000000000..e9452548014
--- /dev/null
+++ b/sci-libs/scipy-python2/Manifest
@@ -0,0 +1 @@
+DIST scipy-1.1.0.tar.gz 15583560 BLAKE2B 477753e622ee26a3bc8c2cb6829410152df84b29ce17a6d53a66348f5536f7993fedf5d32b782405b54b3af3feabf9bc91c381ed39546076849c2fdb71039404 SHA512 72fe32c6c009613cb78202598e5db14f8e630b3218839cfe18d43d40550d94cc5aa100c6f5d41f40e86ae148e9b6a13431bb91b0f9be44b0569ccd7b725fe973
diff --git a/sci-libs/scipy-python2/metadata.xml b/sci-libs/scipy-python2/metadata.xml
new file mode 100644
index 00000000000..2425e896a8a
--- /dev/null
+++ b/sci-libs/scipy-python2/metadata.xml
@@ -0,0 +1,23 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription lang="en">
+ SciPy is an open source library of scientific tools for Python. SciPy
+ supplements the popular numpy module, gathering a variety of high level
+ science and engineering modules together as a single package.
+ SciPy includes modules for graphics and plotting, optimization,
+ integration, special functions, signal and image processing, genetic
+ algorithms, ODE solvers, and others.
+ </longdescription>
+ <use>
+ <flag name="sparse">Adds support for sparse solving with <pkg>sci-libs/umfpack</pkg></flag>
+ </use>
+ <upstream>
+ <remote-id type="pypi">scipy</remote-id>
+ <remote-id type="sourceforge">scipy</remote-id>
+ </upstream>
+</pkgmetadata>
diff --git a/sci-libs/scipy-python2/scipy-python2-1.1.0.ebuild b/sci-libs/scipy-python2/scipy-python2-1.1.0.ebuild
new file mode 100644
index 00000000000..23d6871c6c3
--- /dev/null
+++ b/sci-libs/scipy-python2/scipy-python2-1.1.0.ebuild
@@ -0,0 +1,128 @@
+# Copyright 1999-2020 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=6
+
+PYTHON_COMPAT=( python2_7 )
+PYTHON_REQ_USE="threads(+)"
+
+inherit fortran-2 distutils-r1 flag-o-matic multiprocessing toolchain-funcs
+
+MY_PN=${PN/-python2}
+MY_P=${MY_PN}-${PV}
+
+DESCRIPTION="Scientific algorithms library for Python (py2 version)"
+HOMEPAGE="https://www.scipy.org/"
+SRC_URI="mirror://pypi/${MY_PN:0:1}/${MY_PN}/${MY_P}.tar.gz"
+S=${WORKDIR}/${MY_P}
+
+LICENSE="BSD LGPL-2"
+SLOT="0"
+IUSE="sparse test"
+RESTRICT="!test? ( test )"
+KEYWORDS="~amd64 ~arm ~ppc ~ppc64 ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~x86-macos"
+
+CDEPEND="
+ || (
+ >=dev-python/numpy-python2-1.10[lapack,${PYTHON_USEDEP}]
+ >=dev-python/numpy-1.10[lapack,${PYTHON_USEDEP}]
+ )
+ sci-libs/arpack:0=
+ virtual/cblas
+ virtual/lapack
+ sparse? ( sci-libs/umfpack:0= )"
+DEPEND="${CDEPEND}
+ dev-lang/swig
+ >=dev-python/cython-0.22[${PYTHON_USEDEP}]
+ >=dev-python/setuptools-36[${PYTHON_USEDEP}]
+ virtual/pkgconfig
+ test? (
+ dev-python/nose[${PYTHON_USEDEP}]
+ dev-python/pytest[${PYTHON_USEDEP}]
+ )"
+RDEPEND="${CDEPEND}
+ !<sci-libs/scipy-1.4
+ dev-python/pillow[${PYTHON_USEDEP}]"
+
+DOCS=( HACKING.rst.txt THANKS.txt )
+
+DISTUTILS_IN_SOURCE_BUILD=1
+
+pc_incdir() {
+ $(tc-getPKG_CONFIG) --cflags-only-I $@ | \
+ sed -e 's/^-I//' -e 's/[ ]*-I/:/g' -e 's/[ ]*$//' -e 's|^:||'
+}
+
+pc_libdir() {
+ $(tc-getPKG_CONFIG) --libs-only-L $@ | \
+ sed -e 's/^-L//' -e 's/[ ]*-L/:/g' -e 's/[ ]*$//' -e 's|^:||'
+}
+
+pc_libs() {
+ $(tc-getPKG_CONFIG) --libs-only-l $@ | \
+ sed -e 's/[ ]-l*\(pthread\|m\)\([ ]\|$\)//g' \
+ -e 's/^-l//' -e 's/[ ]*-l/,/g' -e 's/[ ]*$//' \
+ | tr ',' '\n' | sort -u | tr '\n' ',' | sed -e 's|,$||'
+}
+
+python_prepare_all() {
+ # scipy automatically detects libraries by default
+ export {FFTW,FFTW3,UMFPACK}=None
+ use sparse && unset UMFPACK
+ # the missing symbols are in -lpythonX.Y, but since the version can
+ # differ, we just introduce the same scaryness as on Linux/ELF
+ [[ ${CHOST} == *-darwin* ]] \
+ && append-ldflags -bundle "-undefined dynamic_lookup" \
+ || append-ldflags -shared
+ [[ -z ${FC} ]] && export FC="$(tc-getFC)"
+ # hack to force F77 to be FC until bug #278772 is fixed
+ [[ -z ${F77} ]] && export F77="$(tc-getFC)"
+ export F90="${FC}"
+ export SCIPY_FCONFIG="config_fc --noopt --noarch"
+ append-fflags -fPIC
+
+ local libdir="${EPREFIX}"/usr/$(get_libdir)
+ cat >> site.cfg <<-EOF || die
+ [blas]
+ include_dirs = $(pc_incdir cblas)
+ library_dirs = $(pc_libdir cblas blas):${libdir}
+ blas_libs = $(pc_libs cblas blas)
+ [lapack]
+ library_dirs = $(pc_libdir lapack):${libdir}
+ lapack_libs = $(pc_libs lapack)
+ EOF
+
+ # Drop hashes to force rebuild of cython based .c code
+ rm cythonize.dat || die
+
+ distutils-r1_python_prepare_all
+}
+
+python_compile() {
+ # FIXME: parallel python building fails, bug #614464
+ ${EPYTHON} tools/cythonize.py || die
+ distutils-r1_python_compile \
+ ${SCIPY_FCONFIG}
+}
+
+python_test() {
+ # fails with bdist_egg. should it be fixed in distutils-r1 eclass?
+ distutils_install_for_testing ${SCIPY_FCONFIG}
+ cd "${TEST_DIR}" || die "no ${TEST_DIR} available"
+ "${PYTHON}" -c \
+ 'import numpy as np; print("relaxed strides checking:", np.ones((10,1),order="C").flags.f_contiguous)' \
+ || die
+ "${EPYTHON}" -c \
+ "import scipy, sys; r = scipy.test('fast', verbose=2); sys.exit(r)" \
+ || die "Tests fail with ${EPYTHON}"
+}
+
+python_install() {
+ distutils-r1_python_install ${SCIPY_FCONFIG}
+}
+
+pkg_postinst() {
+ elog "You might want to set the variable SCIPY_PIL_IMAGE_VIEWER"
+ elog "to your prefered image viewer. Example:"
+ elog "\t echo \"export SCIPY_PIL_IMAGE_VIEWER=display\" >> ~/.bashrc"
+}
^ permalink raw reply related [flat|nested] 2+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-libs/scipy-python2/
@ 2020-05-01 17:15 Pacho Ramos
0 siblings, 0 replies; 2+ messages in thread
From: Pacho Ramos @ 2020-05-01 17:15 UTC (permalink / raw
To: gentoo-commits
commit: 6c0fa2f0110c90577825ff2d7d056e16d9f9bb9c
Author: Pacho Ramos <pacho <AT> gentoo <DOT> org>
AuthorDate: Fri May 1 17:15:41 2020 +0000
Commit: Pacho Ramos <pacho <AT> gentoo <DOT> org>
CommitDate: Fri May 1 17:15:51 2020 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=6c0fa2f0
sci-libs/scipy-python2: Bump to 1.2.3
Package-Manager: Portage-2.3.96, Repoman-2.3.22
Signed-off-by: Pacho Ramos <pacho <AT> gentoo.org>
sci-libs/scipy-python2/Manifest | 1 +
sci-libs/scipy-python2/scipy-python2-1.2.3.ebuild | 129 ++++++++++++++++++++++
2 files changed, 130 insertions(+)
diff --git a/sci-libs/scipy-python2/Manifest b/sci-libs/scipy-python2/Manifest
index e9452548014..f554d62f88c 100644
--- a/sci-libs/scipy-python2/Manifest
+++ b/sci-libs/scipy-python2/Manifest
@@ -1 +1,2 @@
DIST scipy-1.1.0.tar.gz 15583560 BLAKE2B 477753e622ee26a3bc8c2cb6829410152df84b29ce17a6d53a66348f5536f7993fedf5d32b782405b54b3af3feabf9bc91c381ed39546076849c2fdb71039404 SHA512 72fe32c6c009613cb78202598e5db14f8e630b3218839cfe18d43d40550d94cc5aa100c6f5d41f40e86ae148e9b6a13431bb91b0f9be44b0569ccd7b725fe973
+DIST scipy-1.2.3.tar.gz 23335997 BLAKE2B 183a0e8266a6fa08ca4fa05511d28f51a5ff9b3e8d00c24a355d2db00327eb973befbefbcf47cb288aafd60718db903ac29f775f519484a7c6d0919693c0a21f SHA512 d7739fa2f25689fc14ddf09477207c990b39b593a85f5c74687df1ffe097f6eee1bb2123aaa286189309f6d3b25cdd7757053d8b1008d1d6b3367a8e3a0a53b1
diff --git a/sci-libs/scipy-python2/scipy-python2-1.2.3.ebuild b/sci-libs/scipy-python2/scipy-python2-1.2.3.ebuild
new file mode 100644
index 00000000000..05b35f960a4
--- /dev/null
+++ b/sci-libs/scipy-python2/scipy-python2-1.2.3.ebuild
@@ -0,0 +1,129 @@
+# Copyright 1999-2020 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=6
+
+PYTHON_COMPAT=( python2_7 )
+PYTHON_REQ_USE="threads(+)"
+
+inherit fortran-2 distutils-r1 flag-o-matic multiprocessing toolchain-funcs
+
+MY_PN=${PN/-python2}
+MY_P=${MY_PN}-${PV}
+
+DESCRIPTION="Scientific algorithms library for Python (py2 version)"
+HOMEPAGE="https://www.scipy.org/"
+SRC_URI="mirror://pypi/${MY_PN:0:1}/${MY_PN}/${MY_P}.tar.gz"
+S=${WORKDIR}/${MY_P}
+
+LICENSE="BSD LGPL-2"
+SLOT="0"
+IUSE="sparse test"
+RESTRICT="!test? ( test )"
+KEYWORDS="~amd64 ~arm ~ppc ~ppc64 ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~x86-macos"
+
+CDEPEND="
+ || (
+ >=dev-python/numpy-python2-1.10[lapack,${PYTHON_USEDEP}]
+ >=dev-python/numpy-1.10[lapack,${PYTHON_USEDEP}]
+ )
+ sci-libs/arpack:0=
+ virtual/cblas
+ virtual/lapack
+ sparse? ( sci-libs/umfpack:0= )"
+DEPEND="${CDEPEND}
+ dev-lang/swig
+ >=dev-python/cython-0.22[${PYTHON_USEDEP}]
+ >=dev-python/setuptools-36[${PYTHON_USEDEP}]
+ virtual/pkgconfig
+ test? (
+ dev-python/nose[${PYTHON_USEDEP}]
+ dev-python/pytest[${PYTHON_USEDEP}]
+ )"
+RDEPEND="${CDEPEND}
+ !<sci-libs/scipy-1.4
+ dev-python/pillow[${PYTHON_USEDEP}]"
+
+DOCS=( HACKING.rst.txt THANKS.txt )
+
+DISTUTILS_IN_SOURCE_BUILD=1
+
+pc_incdir() {
+ $(tc-getPKG_CONFIG) --cflags-only-I $@ | \
+ sed -e 's/^-I//' -e 's/[ ]*-I/:/g' -e 's/[ ]*$//' -e 's|^:||'
+}
+
+pc_libdir() {
+ $(tc-getPKG_CONFIG) --libs-only-L $@ | \
+ sed -e 's/^-L//' -e 's/[ ]*-L/:/g' -e 's/[ ]*$//' -e 's|^:||'
+}
+
+pc_libs() {
+ $(tc-getPKG_CONFIG) --libs-only-l $@ | \
+ sed -e 's/[ ]-l*\(pthread\|m\)\([ ]\|$\)//g' \
+ -e 's/^-l//' -e 's/[ ]*-l/,/g' -e 's/[ ]*$//' \
+ | tr ',' '\n' | sort -u | tr '\n' ',' | sed -e 's|,$||'
+}
+
+python_prepare_all() {
+ # scipy automatically detects libraries by default
+ export {FFTW,FFTW3,UMFPACK}=None
+ use sparse && unset UMFPACK
+ # the missing symbols are in -lpythonX.Y, but since the version can
+ # differ, we just introduce the same scaryness as on Linux/ELF
+ [[ ${CHOST} == *-darwin* ]] \
+ && append-ldflags -bundle "-undefined dynamic_lookup" \
+ || append-ldflags -shared
+ [[ -z ${FC} ]] && export FC="$(tc-getFC)"
+ # hack to force F77 to be FC until bug #278772 is fixed
+ [[ -z ${F77} ]] && export F77="$(tc-getFC)"
+ export F90="${FC}"
+ export SCIPY_FCONFIG="config_fc --noopt --noarch"
+ append-fflags -fPIC
+
+ local libdir="${EPREFIX}"/usr/$(get_libdir)
+ cat >> site.cfg <<-EOF || die
+ [blas]
+ include_dirs = $(pc_incdir cblas)
+ library_dirs = $(pc_libdir cblas blas):${libdir}
+ blas_libs = $(pc_libs cblas blas)
+ [lapack]
+ library_dirs = $(pc_libdir lapack):${libdir}
+ lapack_libs = $(pc_libs lapack)
+ EOF
+
+ # Drop hashes to force rebuild of cython based .c code
+ rm cythonize.dat || die
+
+ distutils-r1_python_prepare_all
+}
+
+python_compile() {
+ # FIXME: parallel python building fails, bug #614464
+ ${EPYTHON} tools/cythonize.py || die
+ distutils-r1_python_compile \
+ ${SCIPY_FCONFIG}
+}
+
+python_test() {
+ # fails with bdist_egg. should it be fixed in distutils-r1 eclass?
+ distutils_install_for_testing ${SCIPY_FCONFIG}
+ cd "${TEST_DIR}" || die "no ${TEST_DIR} available"
+ "${PYTHON}" -c \
+ 'import numpy as np; print("relaxed strides checking:", np.ones((10,1),order="C").flags.f_contiguous)' \
+ || die
+ "${EPYTHON}" -c \
+ "import scipy, sys; r = scipy.test('fast', verbose=2); sys.exit(r)" \
+ || die "Tests fail with ${EPYTHON}"
+}
+
+python_install() {
+ distutils-r1_python_install ${SCIPY_FCONFIG}
+ python_optimize
+}
+
+pkg_postinst() {
+ elog "You might want to set the variable SCIPY_PIL_IMAGE_VIEWER"
+ elog "to your prefered image viewer. Example:"
+ elog "\t echo \"export SCIPY_PIL_IMAGE_VIEWER=display\" >> ~/.bashrc"
+}
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