public inbox for gentoo-commits@lists.gentoo.org
 help / color / mirror / Atom feed
* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/ParmEd/
@ 2017-04-05 19:47 Alexey Shvetsov
  0 siblings, 0 replies; 7+ messages in thread
From: Alexey Shvetsov @ 2017-04-05 19:47 UTC (permalink / raw
  To: gentoo-commits

commit:     560758ca9c987c49a6fb0b0d9031dac8b8568c2f
Author:     Alexey Shvetsov <alexxy <AT> gentoo <DOT> org>
AuthorDate: Wed Apr  5 19:47:09 2017 +0000
Commit:     Alexey Shvetsov <alexxy <AT> gentoo <DOT> org>
CommitDate: Wed Apr  5 19:47:09 2017 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=560758ca

sci-chemistry/ParmEd: Initial version

Package-Manager: Portage-2.3.3, Repoman-2.3.1

 sci-chemistry/ParmEd/Manifest            |  1 +
 sci-chemistry/ParmEd/ParmEd-2.7.3.ebuild | 44 ++++++++++++++++++++++++++++++++
 sci-chemistry/ParmEd/metadata.xml        | 12 +++++++++
 3 files changed, 57 insertions(+)

diff --git a/sci-chemistry/ParmEd/Manifest b/sci-chemistry/ParmEd/Manifest
new file mode 100644
index 00000000000..59f65958c89
--- /dev/null
+++ b/sci-chemistry/ParmEd/Manifest
@@ -0,0 +1 @@
+DIST ParmEd-2.7.3.tar.gz 34494858 SHA256 56b3097625be3a5037a5b3d7c4d9467a97f0dd44fea79cf2873f0e56d3409975 SHA512 a3444f915e188bcc924f28b6b4235246e2c063ae98881c48f6e13ebc685d085d6a1bcb61b29509a343cbe58369bc6233acc20ee620c6f1d42da2033772a12e07 WHIRLPOOL 909e2c1681fa3d37c0f43e3584df27bc5af351cfdd8c3726da02a29507fe31d1551cb95cb15e8beb88c52ccf0debe3cb0e2006401e8445a829ef618e8ccddb01

diff --git a/sci-chemistry/ParmEd/ParmEd-2.7.3.ebuild b/sci-chemistry/ParmEd/ParmEd-2.7.3.ebuild
new file mode 100644
index 00000000000..a183d0d0ae2
--- /dev/null
+++ b/sci-chemistry/ParmEd/ParmEd-2.7.3.ebuild
@@ -0,0 +1,44 @@
+# Copyright 1999-2017 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Id$
+
+EAPI=6
+
+PYTHON_COMPAT=( python{2_7,3_4,3_5,3_6} )
+
+if [[ $PV = *9999* ]]; then
+	scm_eclass=git-2
+	EGIT_REPO_URI="
+		git://github.com/${PN}/${PN}.git
+		https://github.com/${PN}/${PN}.git"
+	SRC_URI=""
+	KEYWORDS=""
+else
+	scm_eclass=vcs-snapshot
+	SRC_URI="https://github.com/${PN}/${PN}/archive/${PV}.tar.gz -> ${P}.tar.gz"
+	KEYWORDS="~amd64 ~x86"
+fi
+
+inherit eutils distutils-r1 ${scm_eclass}
+
+DESCRIPTION="Parameter/topology editor and molecular simulator"
+HOMEPAGE="http://parmed.github.io/ParmEd"
+
+LICENSE="LGPL-2"
+SLOT="0"
+IUSE=""
+
+DEPEND="
+	dev-python/numpy[${PYTHON_USEDEP}]
+	sci-libs/scipy[${PYTHON_USEDEP}]
+"
+
+RDEPEND="${DEPEND}"
+
+src_prepare() {
+	sed \
+		-e "/delfile/d" \
+		-e "/deldir/d" \
+		-i setup.py || die
+	distutils-r1_src_prepare
+}

diff --git a/sci-chemistry/ParmEd/metadata.xml b/sci-chemistry/ParmEd/metadata.xml
new file mode 100644
index 00000000000..d10bde235ea
--- /dev/null
+++ b/sci-chemistry/ParmEd/metadata.xml
@@ -0,0 +1,12 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+  <maintainer type="person">
+    <email>alexxy@gentoo.org</email>
+    <name>Alexey Shvetsov</name>
+  </maintainer>
+<maintainer type="project">
+    <email>sci-chemistry@gentoo.org</email>
+    <name>Gentoo Chemistry Project</name>
+  </maintainer>
+</pkgmetadata>


^ permalink raw reply related	[flat|nested] 7+ messages in thread

* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/ParmEd/
@ 2017-07-30 10:04 Michał Górny
  0 siblings, 0 replies; 7+ messages in thread
From: Michał Górny @ 2017-07-30 10:04 UTC (permalink / raw
  To: gentoo-commits

commit:     768384ac38da3276bf1a0e809c663ac0d9af540f
Author:     David Hicks <david <AT> hicks <DOT> id <DOT> au>
AuthorDate: Sat Jul 29 18:57:41 2017 +0000
Commit:     Michał Górny <mgorny <AT> gentoo <DOT> org>
CommitDate: Sun Jul 30 10:04:26 2017 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=768384ac

sci-chemistry/ParmEd: use HTTPS for GitHub, update HOMEPAGE

* Use HTTPS for accessing GitHub domains
* Update HOMEPAGE to point of redirection

Package-Manager: Portage-2.3.6, Repoman-2.3.3

 sci-chemistry/ParmEd/ParmEd-2.7.3.ebuild | 6 ++----
 1 file changed, 2 insertions(+), 4 deletions(-)

diff --git a/sci-chemistry/ParmEd/ParmEd-2.7.3.ebuild b/sci-chemistry/ParmEd/ParmEd-2.7.3.ebuild
index 856b20e9a44..88e65d86e22 100644
--- a/sci-chemistry/ParmEd/ParmEd-2.7.3.ebuild
+++ b/sci-chemistry/ParmEd/ParmEd-2.7.3.ebuild
@@ -7,9 +7,7 @@ PYTHON_COMPAT=( python{2_7,3_4,3_5,3_6} )
 
 if [[ $PV = *9999* ]]; then
 	scm_eclass=git-2
-	EGIT_REPO_URI="
-		git://github.com/${PN}/${PN}.git
-		https://github.com/${PN}/${PN}.git"
+	EGIT_REPO_URI="https://github.com/${PN}/${PN}.git"
 	SRC_URI=""
 	KEYWORDS=""
 else
@@ -21,7 +19,7 @@ fi
 inherit eutils distutils-r1 ${scm_eclass}
 
 DESCRIPTION="Parameter/topology editor and molecular simulator"
-HOMEPAGE="http://parmed.github.io/ParmEd"
+HOMEPAGE="https://parmed.github.io/ParmEd/html/index.html"
 
 LICENSE="LGPL-2"
 SLOT="0"


^ permalink raw reply related	[flat|nested] 7+ messages in thread

* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/ParmEd/
@ 2018-09-03 21:36 Alexey Shvetsov
  0 siblings, 0 replies; 7+ messages in thread
From: Alexey Shvetsov @ 2018-09-03 21:36 UTC (permalink / raw
  To: gentoo-commits

commit:     8a1cece78a3c0fc73419b30e8e7e69cd6af28bea
Author:     Alexey Shvetsov <alexxy <AT> gentoo <DOT> org>
AuthorDate: Mon Sep  3 21:35:28 2018 +0000
Commit:     Alexey Shvetsov <alexxy <AT> gentoo <DOT> org>
CommitDate: Mon Sep  3 21:35:55 2018 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=8a1cece7

sci-chemistry/ParmEd: Version bump

Package-Manager: Portage-2.3.47, Repoman-2.3.10

 sci-chemistry/ParmEd/Manifest            |  1 +
 sci-chemistry/ParmEd/ParmEd-3.0.3.ebuild | 41 ++++++++++++++++++++++++++++++++
 2 files changed, 42 insertions(+)

diff --git a/sci-chemistry/ParmEd/Manifest b/sci-chemistry/ParmEd/Manifest
index aae813414d8..54276dd03b0 100644
--- a/sci-chemistry/ParmEd/Manifest
+++ b/sci-chemistry/ParmEd/Manifest
@@ -1 +1,2 @@
 DIST ParmEd-2.7.3.tar.gz 34494858 BLAKE2B 8e3ac8776f30ac73b06fd2241e5d73ba54517805ffcef7cb2f71281248df4f8afdaa05c2186ff50ba0df45df313ebdecd69a4482c8339d41baf804c37069affe SHA512 a3444f915e188bcc924f28b6b4235246e2c063ae98881c48f6e13ebc685d085d6a1bcb61b29509a343cbe58369bc6233acc20ee620c6f1d42da2033772a12e07
+DIST ParmEd-3.0.3.tar.gz 35159355 BLAKE2B 76b4655905276fe498f38c6a3bd483e89e95d3a339fbcd9ceb90d16f68d417b62e0aacaf18143d0b57167ee7acdc726c44324c844462af4d2385872210daef2a SHA512 60b8ee100a301fbddec8323a3dba550c96ffa09624f41e457d4b3941a4e4a15e903c3da6de24a5183731406f19f9e6436a2111d654bc902c0f06ac8b643acf09

diff --git a/sci-chemistry/ParmEd/ParmEd-3.0.3.ebuild b/sci-chemistry/ParmEd/ParmEd-3.0.3.ebuild
new file mode 100644
index 00000000000..6ea7bdee606
--- /dev/null
+++ b/sci-chemistry/ParmEd/ParmEd-3.0.3.ebuild
@@ -0,0 +1,41 @@
+# Copyright 1999-2018 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=6
+
+PYTHON_COMPAT=( python{2_7,3_4,3_5,3_6} )
+
+if [[ $PV = *9999* ]]; then
+	scm_eclass=git-r3
+	EGIT_REPO_URI="https://github.com/${PN}/${PN}.git"
+	SRC_URI=""
+	KEYWORDS=""
+else
+	scm_eclass=vcs-snapshot
+	SRC_URI="https://github.com/${PN}/${PN}/archive/${PV}.tar.gz -> ${P}.tar.gz"
+	KEYWORDS="~amd64 ~x86"
+fi
+
+inherit eutils distutils-r1 ${scm_eclass}
+
+DESCRIPTION="Parameter/topology editor and molecular simulator"
+HOMEPAGE="https://parmed.github.io/ParmEd/html/index.html"
+
+LICENSE="LGPL-2"
+SLOT="0"
+IUSE=""
+
+DEPEND="
+	dev-python/numpy[${PYTHON_USEDEP}]
+	sci-libs/scipy[${PYTHON_USEDEP}]
+"
+
+RDEPEND="${DEPEND}"
+
+src_prepare() {
+	sed \
+		-e "/delfile/d" \
+		-e "/deldir/d" \
+		-i setup.py || die
+	distutils-r1_src_prepare
+}


^ permalink raw reply related	[flat|nested] 7+ messages in thread

* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/ParmEd/
@ 2020-01-16  6:39 Michał Górny
  0 siblings, 0 replies; 7+ messages in thread
From: Michał Górny @ 2020-01-16  6:39 UTC (permalink / raw
  To: gentoo-commits

commit:     811d91ea61e39b7544ed6997fa3a89059d24bfdb
Author:     Michał Górny <mgorny <AT> gentoo <DOT> org>
AuthorDate: Thu Jan 16 06:26:38 2020 +0000
Commit:     Michał Górny <mgorny <AT> gentoo <DOT> org>
CommitDate: Thu Jan 16 06:38:01 2020 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=811d91ea

sci-chemistry/ParmEd: Remove Python 2

Signed-off-by: Michał Górny <mgorny <AT> gentoo.org>

 sci-chemistry/ParmEd/ParmEd-2.7.3.ebuild | 2 +-
 sci-chemistry/ParmEd/ParmEd-3.0.3.ebuild | 2 +-
 2 files changed, 2 insertions(+), 2 deletions(-)

diff --git a/sci-chemistry/ParmEd/ParmEd-2.7.3.ebuild b/sci-chemistry/ParmEd/ParmEd-2.7.3.ebuild
index ab581daea0c..b7a964b8165 100644
--- a/sci-chemistry/ParmEd/ParmEd-2.7.3.ebuild
+++ b/sci-chemistry/ParmEd/ParmEd-2.7.3.ebuild
@@ -3,7 +3,7 @@
 
 EAPI=6
 
-PYTHON_COMPAT=( python{2_7,3_6} )
+PYTHON_COMPAT=( python3_6 )
 
 if [[ $PV = *9999* ]]; then
 	scm_eclass=git-2

diff --git a/sci-chemistry/ParmEd/ParmEd-3.0.3.ebuild b/sci-chemistry/ParmEd/ParmEd-3.0.3.ebuild
index a2a476a1d5e..37f959acdc6 100644
--- a/sci-chemistry/ParmEd/ParmEd-3.0.3.ebuild
+++ b/sci-chemistry/ParmEd/ParmEd-3.0.3.ebuild
@@ -3,7 +3,7 @@
 
 EAPI=6
 
-PYTHON_COMPAT=( python{2_7,3_6} )
+PYTHON_COMPAT=( python3_6 )
 
 if [[ $PV = *9999* ]]; then
 	scm_eclass=git-r3


^ permalink raw reply related	[flat|nested] 7+ messages in thread

* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/ParmEd/
@ 2022-02-16 13:01 Alexey Shvetsov
  0 siblings, 0 replies; 7+ messages in thread
From: Alexey Shvetsov @ 2022-02-16 13:01 UTC (permalink / raw
  To: gentoo-commits

commit:     56e52196c684140f7a9dbee002763c83579b0d62
Author:     Alexey Shvetsov <alexxy <AT> gentoo <DOT> org>
AuthorDate: Wed Feb 16 13:00:50 2022 +0000
Commit:     Alexey Shvetsov <alexxy <AT> gentoo <DOT> org>
CommitDate: Wed Feb 16 13:01:10 2022 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=56e52196

sci-chemistry/ParmEd: Initial import

Package-Manager: Portage-3.0.30, Repoman-3.0.3
Signed-off-by: Alexey Shvetsov <alexxy <AT> gentoo.org>

 sci-chemistry/ParmEd/Manifest            |  1 +
 sci-chemistry/ParmEd/ParmEd-3.4.3.ebuild | 22 ++++++++++++++++++++++
 sci-chemistry/ParmEd/metadata.xml        | 12 ++++++++++++
 3 files changed, 35 insertions(+)

diff --git a/sci-chemistry/ParmEd/Manifest b/sci-chemistry/ParmEd/Manifest
new file mode 100644
index 000000000000..3b5e676eac0f
--- /dev/null
+++ b/sci-chemistry/ParmEd/Manifest
@@ -0,0 +1 @@
+DIST ParmEd-3.4.3.tar.gz 42174964 BLAKE2B 4f425156318595217c9fde3f65f7c147bea3c73404269bf31567cbfb17020dba6f06d66dc5b514483df1eeedb56f87243df0274782363ca427a740837fcc1c32 SHA512 489996555d05f88dce2304e65455424b1acd746ad7b55d5a42e36705bce812c8aa51c293afad8307f9ab1ecdeade3072d00c194eb2c567528e1fe596defbd1da

diff --git a/sci-chemistry/ParmEd/ParmEd-3.4.3.ebuild b/sci-chemistry/ParmEd/ParmEd-3.4.3.ebuild
new file mode 100644
index 000000000000..e344e71ef07e
--- /dev/null
+++ b/sci-chemistry/ParmEd/ParmEd-3.4.3.ebuild
@@ -0,0 +1,22 @@
+# Copyright 2022 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=8
+
+PYTHON_COMPAT=( python3_{8..10} )
+
+inherit distutils-r1
+
+DESCRIPTION="Parameter and topology file editor and molecular mechanical simulator engine"
+HOMEPAGE="https://parmed.github.io/ParmEd/html/index.html"
+SRC_URI="https://github.com/${PN}/${PN}/archive/refs/tags/${PV}.tar.gz -> ${P}.tar.gz"
+
+LICENSE="LGPL-2"
+SLOT="0"
+KEYWORDS="~amd64"
+
+DEPEND=""
+RDEPEND="${DEPEND}"
+BDEPEND=""
+
+distutils_enable_tests pytest

diff --git a/sci-chemistry/ParmEd/metadata.xml b/sci-chemistry/ParmEd/metadata.xml
new file mode 100644
index 000000000000..22631b58bc2b
--- /dev/null
+++ b/sci-chemistry/ParmEd/metadata.xml
@@ -0,0 +1,12 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+	<maintainer type="person">
+		<email>alexxy@gentoo.org</email>
+		<name>Alexey Shvetsov</name>
+	</maintainer>
+	<maintainer type="project">
+		<email>sci-chemistry@gentoo.org</email>
+		<name>Gentoo Chemistry Project</name>
+	</maintainer>
+</pkgmetadata>


^ permalink raw reply related	[flat|nested] 7+ messages in thread

* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/ParmEd/
@ 2023-06-30 13:33 Sam James
  0 siblings, 0 replies; 7+ messages in thread
From: Sam James @ 2023-06-30 13:33 UTC (permalink / raw
  To: gentoo-commits

commit:     e06fb1f0feeaff281049f912989b6dca04e37ac1
Author:     Sam James <sam <AT> gentoo <DOT> org>
AuthorDate: Fri Jun 30 13:27:19 2023 +0000
Commit:     Sam James <sam <AT> gentoo <DOT> org>
CommitDate: Fri Jun 30 13:27:19 2023 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=e06fb1f0

sci-chemistry/ParmEd: drop blank DEPEND/RDEPEND

This makes it hard to grep for actual mistakes like DEPEND=DEPEND.

Signed-off-by: Sam James <sam <AT> gentoo.org>

 sci-chemistry/ParmEd/ParmEd-3.4.3.ebuild | 4 ----
 1 file changed, 4 deletions(-)

diff --git a/sci-chemistry/ParmEd/ParmEd-3.4.3.ebuild b/sci-chemistry/ParmEd/ParmEd-3.4.3.ebuild
index d99d3582f625..91e14ebf95cc 100644
--- a/sci-chemistry/ParmEd/ParmEd-3.4.3.ebuild
+++ b/sci-chemistry/ParmEd/ParmEd-3.4.3.ebuild
@@ -15,8 +15,4 @@ LICENSE="LGPL-2"
 SLOT="0"
 KEYWORDS="~amd64"
 
-DEPEND=""
-RDEPEND="${DEPEND}"
-BDEPEND=""
-
 distutils_enable_tests pytest


^ permalink raw reply related	[flat|nested] 7+ messages in thread

* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/ParmEd/
@ 2023-06-30 13:33 Sam James
  0 siblings, 0 replies; 7+ messages in thread
From: Sam James @ 2023-06-30 13:33 UTC (permalink / raw
  To: gentoo-commits

commit:     37db4a870bbf633c1402c6762a95b9c7c053871d
Author:     Sam James <sam <AT> gentoo <DOT> org>
AuthorDate: Fri Jun 30 13:29:35 2023 +0000
Commit:     Sam James <sam <AT> gentoo <DOT> org>
CommitDate: Fri Jun 30 13:29:35 2023 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=37db4a87

sci-chemistry/ParmEd: add github upstream metadata

Signed-off-by: Sam James <sam <AT> gentoo.org>

 sci-chemistry/ParmEd/metadata.xml | 3 +++
 1 file changed, 3 insertions(+)

diff --git a/sci-chemistry/ParmEd/metadata.xml b/sci-chemistry/ParmEd/metadata.xml
index 22631b58bc2b..84eaa2e2cd49 100644
--- a/sci-chemistry/ParmEd/metadata.xml
+++ b/sci-chemistry/ParmEd/metadata.xml
@@ -9,4 +9,7 @@
 		<email>sci-chemistry@gentoo.org</email>
 		<name>Gentoo Chemistry Project</name>
 	</maintainer>
+	<upstream>
+		<remote-id type="github">ParmEd/ParmEd</remote-id>
+	</upstream>
 </pkgmetadata>


^ permalink raw reply related	[flat|nested] 7+ messages in thread

end of thread, other threads:[~2023-06-30 13:33 UTC | newest]

Thread overview: 7+ messages (download: mbox.gz follow: Atom feed
-- links below jump to the message on this page --
2020-01-16  6:39 [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/ParmEd/ Michał Górny
  -- strict thread matches above, loose matches on Subject: below --
2023-06-30 13:33 Sam James
2023-06-30 13:33 Sam James
2022-02-16 13:01 Alexey Shvetsov
2018-09-03 21:36 Alexey Shvetsov
2017-07-30 10:04 Michał Górny
2017-04-05 19:47 Alexey Shvetsov

This is a public inbox, see mirroring instructions
for how to clone and mirror all data and code used for this inbox