* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/GromacsWrapper/
@ 2016-07-19 10:38 Alexey Shvetsov
0 siblings, 0 replies; 17+ messages in thread
From: Alexey Shvetsov @ 2016-07-19 10:38 UTC (permalink / raw
To: gentoo-commits
commit: 7d36362dfa4df704de5c7bbe00f4ba1718ac4bdc
Author: Alexey Shvetsov <alexxy <AT> gentoo <DOT> org>
AuthorDate: Tue Jul 19 10:38:26 2016 +0000
Commit: Alexey Shvetsov <alexxy <AT> gentoo <DOT> org>
CommitDate: Tue Jul 19 10:38:26 2016 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=7d36362d
sci-chemistry/GromacsWrapper: Version bump
Package-Manager: portage-2.3.0
.../GromacsWrapper/GromacsWrapper-0.5.1.ebuild | 37 ++++++++++++++++++++++
sci-chemistry/GromacsWrapper/Manifest | 1 +
2 files changed, 38 insertions(+)
diff --git a/sci-chemistry/GromacsWrapper/GromacsWrapper-0.5.1.ebuild b/sci-chemistry/GromacsWrapper/GromacsWrapper-0.5.1.ebuild
new file mode 100644
index 0000000..ac4ab3d
--- /dev/null
+++ b/sci-chemistry/GromacsWrapper/GromacsWrapper-0.5.1.ebuild
@@ -0,0 +1,37 @@
+# Copyright 1999-2016 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Id$
+
+EAPI=6
+
+PYTHON_COMPAT=( python2_7 )
+
+if [[ $PV = *9999* ]]; then
+ scm_eclass=git-2
+ EGIT_REPO_URI="
+ git://github.com/orbeckst/${PN}.git
+ https://github.com/orbeckst/${PN}.git"
+ EGIT_BRANCH="develop"
+ SRC_URI=""
+ KEYWORDS=""
+else
+ scm_eclass=vcs-snapshot
+ SRC_URI="https://github.com/orbeckst/${PN}/archive/release-${PV}.tar.gz -> ${P}.tar.gz"
+ KEYWORDS="~amd64 ~x86"
+fi
+
+inherit eutils distutils-r1 ${scm_eclass}
+
+DESCRIPTION="Python framework for Gromacs"
+HOMEPAGE="https://orbeckst.github.com/GromacsWrapper/"
+
+LICENSE="GPL-3 LGPL-3"
+SLOT="0"
+IUSE=""
+
+DEPEND="
+ >=dev-python/matplotlib-0.91.3[${PYTHON_USEDEP}]
+ >=dev-python/RecSQL-0.3[${PYTHON_USEDEP}]
+ >=sci-libs/scipy-0.9[${PYTHON_USEDEP}]
+ "
+RDEPEND="${DEPEND}"
diff --git a/sci-chemistry/GromacsWrapper/Manifest b/sci-chemistry/GromacsWrapper/Manifest
index 4c77ff3..8c3a85f 100644
--- a/sci-chemistry/GromacsWrapper/Manifest
+++ b/sci-chemistry/GromacsWrapper/Manifest
@@ -1,2 +1,3 @@
DIST GromacsWrapper-0.3.1.tar.gz 1575486 SHA256 ddd2668060668528878370961a9a33257cf3643fd0d9e9191b1d26d4f78e803b SHA512 655dae431bf575963af58a5f75abe6703fe1ecdddba5839b671d9237ddee0e33ab19b528e89bcba4db9063fe30622d44e8f47c7b6452b4d1eed8c7400873a012 WHIRLPOOL 3b848aff931190eabd49426d61186a3c1eef9779a9fabf95b4d21d47793e5543adbcba5ac2b39c8a9af7c2479930a8ea65bb336e2155dfca98378df56ba4cb3e
DIST GromacsWrapper-0.3.2.tar.gz 1592147 SHA256 2fe0173275ca125a4260aa05f82746338f237766fe8aa998e85a5b40cf83e42c SHA512 a9e0abb5e7ad0c6831e23b6a8c09c6e4cc74b33d66cd17df8e00b876dc275dda11c3d3723565d8d58c45bdf6b2b00323bf85e24e2d5324a8d8b597cc3e5d78a4 WHIRLPOOL 852d73d01e1060369521ec5ff5197c86daa30ae98f285fe5e3d392a315cff10c68e2ba54ec9a2659260cf6830cf17cb1e094eecbd63652e9c3f13fff8707a824
+DIST GromacsWrapper-0.5.1.tar.gz 1247839 SHA256 cca0713a50bdceaae554b4a41f2c0b6d1c66074e9eaca17ecd87ce074cc56f7d SHA512 43b6b47e24cbb118492495370b165eb4b0e7672ba4e1c868d3039a0ad0b9828058f30ab7344118c7b0e7dd166ac325ea2b3483bd28b8f65dd972a101a5b9facd WHIRLPOOL f705d86725d95a226e74e589cf9ccc98a9e366c3aaea4818788e6ea1a359d048000718607274aa783c779c91c88bd882e65e1840a6b3c156fa374655de47b40a
^ permalink raw reply related [flat|nested] 17+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/GromacsWrapper/
@ 2017-07-30 10:04 Michał Górny
0 siblings, 0 replies; 17+ messages in thread
From: Michał Górny @ 2017-07-30 10:04 UTC (permalink / raw
To: gentoo-commits
commit: 8a2fe401e6313956e66c3ca40562a41764d65cd5
Author: David Hicks <david <AT> hicks <DOT> id <DOT> au>
AuthorDate: Sat Jul 29 18:47:50 2017 +0000
Commit: Michał Górny <mgorny <AT> gentoo <DOT> org>
CommitDate: Sun Jul 30 10:04:24 2017 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=8a2fe401
sci-chemistry/GromacsWrapper: use HTTPS for GitHub
Package-Manager: Portage-2.3.6, Repoman-2.3.3
sci-chemistry/GromacsWrapper/GromacsWrapper-0.3.1.ebuild | 6 ++----
sci-chemistry/GromacsWrapper/GromacsWrapper-0.3.2.ebuild | 6 ++----
sci-chemistry/GromacsWrapper/GromacsWrapper-0.5.1.ebuild | 6 ++----
3 files changed, 6 insertions(+), 12 deletions(-)
diff --git a/sci-chemistry/GromacsWrapper/GromacsWrapper-0.3.1.ebuild b/sci-chemistry/GromacsWrapper/GromacsWrapper-0.3.1.ebuild
index 8f0b0392ce6..4c953dd73e3 100644
--- a/sci-chemistry/GromacsWrapper/GromacsWrapper-0.3.1.ebuild
+++ b/sci-chemistry/GromacsWrapper/GromacsWrapper-0.3.1.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2015 Gentoo Foundation
+# Copyright 1999-2017 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
EAPI=5
@@ -7,9 +7,7 @@ PYTHON_COMPAT=( python2_7 )
if [[ $PV = *9999* ]]; then
scm_eclass=git-2
- EGIT_REPO_URI="
- git://github.com/orbeckst/${PN}.git
- https://github.com/orbeckst/${PN}.git"
+ EGIT_REPO_URI="https://github.com/orbeckst/${PN}.git"
EGIT_BRANCH="develop"
SRC_URI=""
KEYWORDS=""
diff --git a/sci-chemistry/GromacsWrapper/GromacsWrapper-0.3.2.ebuild b/sci-chemistry/GromacsWrapper/GromacsWrapper-0.3.2.ebuild
index 1e69985d7ef..dc2488dd3b9 100644
--- a/sci-chemistry/GromacsWrapper/GromacsWrapper-0.3.2.ebuild
+++ b/sci-chemistry/GromacsWrapper/GromacsWrapper-0.3.2.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2014 Gentoo Foundation
+# Copyright 1999-2017 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
EAPI=5
@@ -7,9 +7,7 @@ PYTHON_COMPAT=( python2_7 )
if [[ $PV = *9999* ]]; then
scm_eclass=git-2
- EGIT_REPO_URI="
- git://github.com/orbeckst/${PN}.git
- https://github.com/orbeckst/${PN}.git"
+ EGIT_REPO_URI="https://github.com/orbeckst/${PN}.git"
EGIT_BRANCH="develop"
SRC_URI=""
KEYWORDS=""
diff --git a/sci-chemistry/GromacsWrapper/GromacsWrapper-0.5.1.ebuild b/sci-chemistry/GromacsWrapper/GromacsWrapper-0.5.1.ebuild
index 046d3d73e5e..3e946ea31dd 100644
--- a/sci-chemistry/GromacsWrapper/GromacsWrapper-0.5.1.ebuild
+++ b/sci-chemistry/GromacsWrapper/GromacsWrapper-0.5.1.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2016 Gentoo Foundation
+# Copyright 1999-2017 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
EAPI=6
@@ -7,9 +7,7 @@ PYTHON_COMPAT=( python2_7 )
if [[ $PV = *9999* ]]; then
scm_eclass=git-2
- EGIT_REPO_URI="
- git://github.com/orbeckst/${PN}.git
- https://github.com/orbeckst/${PN}.git"
+ EGIT_REPO_URI="https://github.com/orbeckst/${PN}.git"
EGIT_BRANCH="develop"
SRC_URI=""
KEYWORDS=""
^ permalink raw reply related [flat|nested] 17+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/GromacsWrapper/
@ 2018-09-03 21:20 Alexey Shvetsov
0 siblings, 0 replies; 17+ messages in thread
From: Alexey Shvetsov @ 2018-09-03 21:20 UTC (permalink / raw
To: gentoo-commits
commit: 5bfc612fcf6f0fa77efd007f02ccbbcd5a199d63
Author: Alexey Shvetsov <alexxy <AT> gentoo <DOT> org>
AuthorDate: Mon Sep 3 21:20:07 2018 +0000
Commit: Alexey Shvetsov <alexxy <AT> gentoo <DOT> org>
CommitDate: Mon Sep 3 21:20:07 2018 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=5bfc612f
sci-chemistry/GromacsWrapper: Version bump
Package-Manager: Portage-2.3.47, Repoman-2.3.10
.../GromacsWrapper/GromacsWrapper-0.3.1.ebuild | 38 ----------------------
.../GromacsWrapper/GromacsWrapper-0.3.2.ebuild | 38 ----------------------
...er-0.5.1.ebuild => GromacsWrapper-0.7.0.ebuild} | 15 ++++-----
sci-chemistry/GromacsWrapper/Manifest | 4 +--
4 files changed, 8 insertions(+), 87 deletions(-)
diff --git a/sci-chemistry/GromacsWrapper/GromacsWrapper-0.3.1.ebuild b/sci-chemistry/GromacsWrapper/GromacsWrapper-0.3.1.ebuild
deleted file mode 100644
index 4c953dd73e3..00000000000
--- a/sci-chemistry/GromacsWrapper/GromacsWrapper-0.3.1.ebuild
+++ /dev/null
@@ -1,38 +0,0 @@
-# Copyright 1999-2017 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 )
-
-if [[ $PV = *9999* ]]; then
- scm_eclass=git-2
- EGIT_REPO_URI="https://github.com/orbeckst/${PN}.git"
- EGIT_BRANCH="develop"
- SRC_URI=""
- KEYWORDS=""
-else
- scm_eclass=vcs-snapshot
- SRC_URI="https://github.com/orbeckst/${PN}/archive/release-${PV}.tar.gz -> ${P}.tar.gz"
- KEYWORDS="~amd64 ~x86"
-fi
-
-inherit eutils distutils-r1 ${scm_eclass}
-
-DESCRIPTION="Python framework for Gromacs"
-HOMEPAGE="https://orbeckst.github.com/GromacsWrapper/"
-
-LICENSE="GPL-3 LGPL-3"
-SLOT="0"
-IUSE=""
-
-DEPEND="
- >=dev-python/matplotlib-0.91.3[${PYTHON_USEDEP}]
- >=dev-python/RecSQL-0.3[${PYTHON_USEDEP}]
- >=sci-libs/scipy-0.9[${PYTHON_USEDEP}]
- "
-RDEPEND="${DEPEND}"
-
-PATCHES=(
- "${FILESDIR}/0001-Drop-chmod-hack.patch"
-)
diff --git a/sci-chemistry/GromacsWrapper/GromacsWrapper-0.3.2.ebuild b/sci-chemistry/GromacsWrapper/GromacsWrapper-0.3.2.ebuild
deleted file mode 100644
index dc2488dd3b9..00000000000
--- a/sci-chemistry/GromacsWrapper/GromacsWrapper-0.3.2.ebuild
+++ /dev/null
@@ -1,38 +0,0 @@
-# Copyright 1999-2017 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 )
-
-if [[ $PV = *9999* ]]; then
- scm_eclass=git-2
- EGIT_REPO_URI="https://github.com/orbeckst/${PN}.git"
- EGIT_BRANCH="develop"
- SRC_URI=""
- KEYWORDS=""
-else
- scm_eclass=vcs-snapshot
- SRC_URI="https://github.com/orbeckst/${PN}/archive/release-${PV}.tar.gz -> ${P}.tar.gz"
- KEYWORDS="~amd64 ~x86"
-fi
-
-inherit eutils distutils-r1 ${scm_eclass}
-
-DESCRIPTION="Python framework for Gromacs"
-HOMEPAGE="https://orbeckst.github.com/GromacsWrapper/"
-
-LICENSE="GPL-3 LGPL-3"
-SLOT="0"
-IUSE=""
-
-DEPEND="
- >=dev-python/matplotlib-0.91.3[${PYTHON_USEDEP}]
- >=dev-python/RecSQL-0.3[${PYTHON_USEDEP}]
- >=sci-libs/scipy-0.9[${PYTHON_USEDEP}]
- "
-RDEPEND="${DEPEND}"
-
-PATCHES=(
- "${FILESDIR}/0001-Drop-chmod-hack.patch"
-)
diff --git a/sci-chemistry/GromacsWrapper/GromacsWrapper-0.5.1.ebuild b/sci-chemistry/GromacsWrapper/GromacsWrapper-0.7.0.ebuild
similarity index 57%
rename from sci-chemistry/GromacsWrapper/GromacsWrapper-0.5.1.ebuild
rename to sci-chemistry/GromacsWrapper/GromacsWrapper-0.7.0.ebuild
index 3e946ea31dd..55ff025bcf6 100644
--- a/sci-chemistry/GromacsWrapper/GromacsWrapper-0.5.1.ebuild
+++ b/sci-chemistry/GromacsWrapper/GromacsWrapper-0.7.0.ebuild
@@ -1,26 +1,26 @@
-# Copyright 1999-2017 Gentoo Foundation
+# Copyright 1999-2018 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
EAPI=6
-PYTHON_COMPAT=( python2_7 )
+PYTHON_COMPAT=( python{2_7,3_5,3_6} )
if [[ $PV = *9999* ]]; then
- scm_eclass=git-2
- EGIT_REPO_URI="https://github.com/orbeckst/${PN}.git"
+ scm_eclass=git-r3
+ EGIT_REPO_URI="https://github.com/Becksteinlab/${PN}.git"
EGIT_BRANCH="develop"
SRC_URI=""
KEYWORDS=""
else
scm_eclass=vcs-snapshot
- SRC_URI="https://github.com/orbeckst/${PN}/archive/release-${PV}.tar.gz -> ${P}.tar.gz"
+ SRC_URI="https://github.com/Becksteinlab/${PN}/archive/release-${PV}.tar.gz -> ${P}.tar.gz"
KEYWORDS="~amd64 ~x86"
fi
inherit eutils distutils-r1 ${scm_eclass}
DESCRIPTION="Python framework for Gromacs"
-HOMEPAGE="https://orbeckst.github.com/GromacsWrapper/"
+HOMEPAGE="https://gromacswrapper.readthedocs.io"
LICENSE="GPL-3 LGPL-3"
SLOT="0"
@@ -28,7 +28,6 @@ IUSE=""
DEPEND="
>=dev-python/matplotlib-0.91.3[${PYTHON_USEDEP}]
- >=dev-python/RecSQL-0.3[${PYTHON_USEDEP}]
>=sci-libs/scipy-0.9[${PYTHON_USEDEP}]
- "
+ dev-python/six[${PYTHON_USEDEP}]"
RDEPEND="${DEPEND}"
diff --git a/sci-chemistry/GromacsWrapper/Manifest b/sci-chemistry/GromacsWrapper/Manifest
index 6b8bc823176..54c404a4d0e 100644
--- a/sci-chemistry/GromacsWrapper/Manifest
+++ b/sci-chemistry/GromacsWrapper/Manifest
@@ -1,3 +1 @@
-DIST GromacsWrapper-0.3.1.tar.gz 1575486 BLAKE2B 3ffb89f1e2facc281c58b48e1acf50fe14d2f0e095ac59a1fc9a571118926fa3d054bfc3ee1debdc46f7ec09fcd60944de460933048d6cc9f10d0411bc246c1a SHA512 655dae431bf575963af58a5f75abe6703fe1ecdddba5839b671d9237ddee0e33ab19b528e89bcba4db9063fe30622d44e8f47c7b6452b4d1eed8c7400873a012
-DIST GromacsWrapper-0.3.2.tar.gz 1592147 BLAKE2B 5b04deab9ab8f19f4fee9c7f0d1a614e64996635a5c8923e2271f26dc3ff7a03886a0306199e894b48267adc8dfc2dd853aeb37860007b27edd2d0c2424a7b35 SHA512 a9e0abb5e7ad0c6831e23b6a8c09c6e4cc74b33d66cd17df8e00b876dc275dda11c3d3723565d8d58c45bdf6b2b00323bf85e24e2d5324a8d8b597cc3e5d78a4
-DIST GromacsWrapper-0.5.1.tar.gz 1247839 BLAKE2B acab6411167c68fe8e1761418ab6f96918fa0eda91a2de15ccebacaf47e7352455576b2666982c25f5a6af4f10a443b4f20a6887998b68f12b13e1cfb4b8e838 SHA512 43b6b47e24cbb118492495370b165eb4b0e7672ba4e1c868d3039a0ad0b9828058f30ab7344118c7b0e7dd166ac325ea2b3483bd28b8f65dd972a101a5b9facd
+DIST GromacsWrapper-0.7.0.tar.gz 1177718 BLAKE2B 88515b14ce85ecdf0323c3e4a68ac702cfc14569508be015fafc8192174af792507f6d10935aed2f969417ad34d5a1216688e9dce2f6dc6fc47529b87572d229 SHA512 74f6c5b84556b79ced128e48bf111cc40306b8854c8fcf53cab8f2fcf2dce56367e075c116f50aa1aa0947c83af0641bc78045e7d5035f2a8813f9709edce097
^ permalink raw reply related [flat|nested] 17+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/GromacsWrapper/
@ 2019-08-23 13:18 Alexey Shvetsov
0 siblings, 0 replies; 17+ messages in thread
From: Alexey Shvetsov @ 2019-08-23 13:18 UTC (permalink / raw
To: gentoo-commits
commit: a3906fed13894b43b206e5ee3875ee3ba668ae51
Author: Alexey Shvetsov <alexxy <AT> gentoo <DOT> org>
AuthorDate: Fri Aug 23 13:17:41 2019 +0000
Commit: Alexey Shvetsov <alexxy <AT> gentoo <DOT> org>
CommitDate: Fri Aug 23 13:18:06 2019 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=a3906fed
sci-chemistry/GromacsWrapper: Version bump
Package-Manager: Portage-2.3.72, Repoman-2.3.17
Signed-off-by: Alexey Shvetsov <alexxy <AT> gentoo.org>
...csWrapper-0.7.0.ebuild => GromacsWrapper-0.8.0.ebuild} | 15 ++++++++-------
sci-chemistry/GromacsWrapper/Manifest | 2 +-
sci-chemistry/GromacsWrapper/metadata.xml | 2 +-
3 files changed, 10 insertions(+), 9 deletions(-)
diff --git a/sci-chemistry/GromacsWrapper/GromacsWrapper-0.7.0.ebuild b/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.0.ebuild
similarity index 70%
rename from sci-chemistry/GromacsWrapper/GromacsWrapper-0.7.0.ebuild
rename to sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.0.ebuild
index 55ff025bcf6..688c26cc380 100644
--- a/sci-chemistry/GromacsWrapper/GromacsWrapper-0.7.0.ebuild
+++ b/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.0.ebuild
@@ -1,9 +1,9 @@
-# Copyright 1999-2018 Gentoo Foundation
+# Copyright 1999-2019 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
-EAPI=6
+EAPI=7
-PYTHON_COMPAT=( python{2_7,3_5,3_6} )
+PYTHON_COMPAT=( python2_7 python3_{5,6,7} )
if [[ $PV = *9999* ]]; then
scm_eclass=git-r3
@@ -26,8 +26,9 @@ LICENSE="GPL-3 LGPL-3"
SLOT="0"
IUSE=""
-DEPEND="
- >=dev-python/matplotlib-0.91.3[${PYTHON_USEDEP}]
- >=sci-libs/scipy-0.9[${PYTHON_USEDEP}]
- dev-python/six[${PYTHON_USEDEP}]"
+BDEPEND="
+ dev-python/six[${PYTHON_USEDEP}]
+ dev-python/numpy[${PYTHON_USEDEP}]
+ dev-python/matplotlib[${PYTHON_USEDEP}]
+ sci-libs/numkit[${PYTHON_USEDEP}]"
RDEPEND="${DEPEND}"
diff --git a/sci-chemistry/GromacsWrapper/Manifest b/sci-chemistry/GromacsWrapper/Manifest
index 54c404a4d0e..693953f072e 100644
--- a/sci-chemistry/GromacsWrapper/Manifest
+++ b/sci-chemistry/GromacsWrapper/Manifest
@@ -1 +1 @@
-DIST GromacsWrapper-0.7.0.tar.gz 1177718 BLAKE2B 88515b14ce85ecdf0323c3e4a68ac702cfc14569508be015fafc8192174af792507f6d10935aed2f969417ad34d5a1216688e9dce2f6dc6fc47529b87572d229 SHA512 74f6c5b84556b79ced128e48bf111cc40306b8854c8fcf53cab8f2fcf2dce56367e075c116f50aa1aa0947c83af0641bc78045e7d5035f2a8813f9709edce097
+DIST GromacsWrapper-0.8.0.tar.gz 1205837 BLAKE2B 3627e56df0dc6ba86caac67795416c7c8c187aaa4fac545600d17dcd799cb153feaab61a0f0632e051c4e9c0b4cd74f8e165156873e36bc53571bec78e5fca61 SHA512 da7215216c9a2b52094bb7e43e04f1b429c4893ba67b4bd850fe68e99f338813392fd9d0aa1b19d3398c694be964bc2badbf1b3623420da929ee4abcef18026f
diff --git a/sci-chemistry/GromacsWrapper/metadata.xml b/sci-chemistry/GromacsWrapper/metadata.xml
index 16752065b88..e8b6e94ed2a 100644
--- a/sci-chemistry/GromacsWrapper/metadata.xml
+++ b/sci-chemistry/GromacsWrapper/metadata.xml
@@ -10,6 +10,6 @@
<name>Gentoo Chemistry Project</name>
</maintainer>
<upstream>
- <remote-id type="github">orbeckst/GromacsWrapper</remote-id>
+ <remote-id type="github">Becksteinlab/GromacsWrapper</remote-id>
</upstream>
</pkgmetadata>
^ permalink raw reply related [flat|nested] 17+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/GromacsWrapper/
@ 2020-01-16 6:39 Michał Górny
0 siblings, 0 replies; 17+ messages in thread
From: Michał Górny @ 2020-01-16 6:39 UTC (permalink / raw
To: gentoo-commits
commit: bebba32d00cd8635166a3b2856696000f20d4df9
Author: Michał Górny <mgorny <AT> gentoo <DOT> org>
AuthorDate: Thu Jan 16 06:25:31 2020 +0000
Commit: Michał Górny <mgorny <AT> gentoo <DOT> org>
CommitDate: Thu Jan 16 06:37:55 2020 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=bebba32d
sci-chemistry/GromacsWrapper: Remove Python 2
Signed-off-by: Michał Górny <mgorny <AT> gentoo.org>
sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.0.ebuild | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.0.ebuild b/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.0.ebuild
index e9bde2396c6..b80d49a156d 100644
--- a/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.0.ebuild
+++ b/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.0.ebuild
@@ -3,7 +3,7 @@
EAPI=7
-PYTHON_COMPAT=( python2_7 python3_{6,7} )
+PYTHON_COMPAT=( python3_{6,7} )
if [[ $PV = *9999* ]]; then
scm_eclass=git-r3
^ permalink raw reply related [flat|nested] 17+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/GromacsWrapper/
@ 2021-04-03 15:44 Sam James
0 siblings, 0 replies; 17+ messages in thread
From: Sam James @ 2021-04-03 15:44 UTC (permalink / raw
To: gentoo-commits
commit: 4e59a6dd8c7a5977f1e48ecab4bd00c0d9c96b38
Author: Sam James <sam <AT> gentoo <DOT> org>
AuthorDate: Fri Apr 2 09:43:30 2021 +0000
Commit: Sam James <sam <AT> gentoo <DOT> org>
CommitDate: Sat Apr 3 15:43:41 2021 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=4e59a6dd
sci-chemistry/GromacsWrapper: fix variable references
Package-Manager: Portage-3.0.14-prefix, Repoman-3.0.2
Signed-off-by: Sam James <sam <AT> gentoo.org>
sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.0.ebuild | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.0.ebuild b/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.0.ebuild
index 1338b634d92..d07405c37e0 100644
--- a/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.0.ebuild
+++ b/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.0.ebuild
@@ -5,7 +5,7 @@ EAPI=7
PYTHON_COMPAT=( python3_7 )
-if [[ $PV = *9999* ]]; then
+if [[ ${PV} = *9999* ]]; then
scm_eclass=git-r3
EGIT_REPO_URI="https://github.com/Becksteinlab/${PN}.git"
EGIT_BRANCH="develop"
^ permalink raw reply related [flat|nested] 17+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/GromacsWrapper/
@ 2021-04-12 1:09 Sam James
0 siblings, 0 replies; 17+ messages in thread
From: Sam James @ 2021-04-12 1:09 UTC (permalink / raw
To: gentoo-commits
commit: 939a776774f2cfa7bc4d817c4e0353920280db70
Author: Sam James <sam <AT> gentoo <DOT> org>
AuthorDate: Mon Apr 12 00:31:05 2021 +0000
Commit: Sam James <sam <AT> gentoo <DOT> org>
CommitDate: Mon Apr 12 01:07:34 2021 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=939a7767
sci-chemistry/GromacsWrapper: fix RDEPEND typo
Signed-off-by: Sam James <sam <AT> gentoo.org>
.../{GromacsWrapper-0.8.0.ebuild => GromacsWrapper-0.8.0-r1.ebuild} | 6 ++++--
1 file changed, 4 insertions(+), 2 deletions(-)
diff --git a/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.0.ebuild b/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.0-r1.ebuild
similarity index 97%
rename from sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.0.ebuild
rename to sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.0-r1.ebuild
index d07405c37e0..593677d3129 100644
--- a/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.0.ebuild
+++ b/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.0-r1.ebuild
@@ -25,14 +25,16 @@ LICENSE="GPL-3 LGPL-3"
SLOT="0"
IUSE=""
-BDEPEND="
+RDEPEND="
dev-python/six[${PYTHON_USEDEP}]
dev-python/numpy[${PYTHON_USEDEP}]
dev-python/matplotlib[${PYTHON_USEDEP}]
sci-libs/numkit[${PYTHON_USEDEP}]
+"
+BDEPEND="
+ ${RDEPEND}
test? ( >=dev-python/pandas-0.17[${PYTHON_USEDEP}] )
"
-RDEPEND="${DEPEND}"
distutils_enable_tests pytest
^ permalink raw reply related [flat|nested] 17+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/GromacsWrapper/
@ 2021-04-17 20:08 Pacho Ramos
0 siblings, 0 replies; 17+ messages in thread
From: Pacho Ramos @ 2021-04-17 20:08 UTC (permalink / raw
To: gentoo-commits
commit: 0a8916104428974d31df9a68677f9b6d1f80355a
Author: Pacho Ramos <pacho <AT> gentoo <DOT> org>
AuthorDate: Sat Apr 17 20:07:58 2021 +0000
Commit: Pacho Ramos <pacho <AT> gentoo <DOT> org>
CommitDate: Sat Apr 17 20:08:27 2021 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=0a891610
sci-chemistry/GromacsWrapper: Support newer python versions
Package-Manager: Portage-3.0.18, Repoman-3.0.3
Signed-off-by: Pacho Ramos <pacho <AT> gentoo.org>
sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.0-r1.ebuild | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.0-r1.ebuild b/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.0-r1.ebuild
index 593677d3129..8f747a7a5ac 100644
--- a/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.0-r1.ebuild
+++ b/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.0-r1.ebuild
@@ -3,7 +3,7 @@
EAPI=7
-PYTHON_COMPAT=( python3_7 )
+PYTHON_COMPAT=( python3_{7..9} )
if [[ ${PV} = *9999* ]]; then
scm_eclass=git-r3
^ permalink raw reply related [flat|nested] 17+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/GromacsWrapper/
@ 2022-01-13 16:13 Alexey Shvetsov
0 siblings, 0 replies; 17+ messages in thread
From: Alexey Shvetsov @ 2022-01-13 16:13 UTC (permalink / raw
To: gentoo-commits
commit: 772a32fd8ccbe71fca4b23bb12a74356285cb38b
Author: Alexey Shvetsov <alexxy <AT> gentoo <DOT> org>
AuthorDate: Thu Jan 13 16:12:31 2022 +0000
Commit: Alexey Shvetsov <alexxy <AT> gentoo <DOT> org>
CommitDate: Thu Jan 13 16:12:31 2022 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=772a32fd
sci-chemistry/GromacsWrapper: Add py 3.10
Package-Manager: Portage-3.0.30, Repoman-3.0.3
Signed-off-by: Alexey Shvetsov <alexxy <AT> gentoo.org>
sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.0-r1.ebuild | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.0-r1.ebuild b/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.0-r1.ebuild
index 8f747a7a5acd..ae63df915cd8 100644
--- a/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.0-r1.ebuild
+++ b/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.0-r1.ebuild
@@ -1,9 +1,9 @@
-# Copyright 1999-2021 Gentoo Authors
+# Copyright 1999-2022 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=7
-PYTHON_COMPAT=( python3_{7..9} )
+PYTHON_COMPAT=( python3_{7..10} )
if [[ ${PV} = *9999* ]]; then
scm_eclass=git-r3
^ permalink raw reply related [flat|nested] 17+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/GromacsWrapper/
@ 2022-01-13 16:13 Alexey Shvetsov
0 siblings, 0 replies; 17+ messages in thread
From: Alexey Shvetsov @ 2022-01-13 16:13 UTC (permalink / raw
To: gentoo-commits
commit: 4fa2a7edeaed03114132fc416636847b1a3a46c9
Author: Alexey Shvetsov <alexxy <AT> gentoo <DOT> org>
AuthorDate: Thu Jan 13 16:13:26 2022 +0000
Commit: Alexey Shvetsov <alexxy <AT> gentoo <DOT> org>
CommitDate: Thu Jan 13 16:13:26 2022 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=4fa2a7ed
sci-chemistry/GromacsWrapper: Drop eutils.eclass
Package-Manager: Portage-3.0.30, Repoman-3.0.3
Signed-off-by: Alexey Shvetsov <alexxy <AT> gentoo.org>
sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.0-r1.ebuild | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.0-r1.ebuild b/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.0-r1.ebuild
index ae63df915cd8..e6354fb05f92 100644
--- a/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.0-r1.ebuild
+++ b/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.0-r1.ebuild
@@ -16,7 +16,7 @@ else
KEYWORDS="~amd64 ~x86"
fi
-inherit eutils distutils-r1 ${scm_eclass}
+inherit distutils-r1 ${scm_eclass}
DESCRIPTION="Python framework for Gromacs"
HOMEPAGE="https://gromacswrapper.readthedocs.io"
^ permalink raw reply related [flat|nested] 17+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/GromacsWrapper/
@ 2022-10-29 15:04 Alexey Shvetsov
0 siblings, 0 replies; 17+ messages in thread
From: Alexey Shvetsov @ 2022-10-29 15:04 UTC (permalink / raw
To: gentoo-commits
commit: 535b60e5c35c65b15ddcd66739871003be0cb837
Author: Alexey Shvetsov <alexxy <AT> gentoo <DOT> org>
AuthorDate: Sat Oct 29 15:03:32 2022 +0000
Commit: Alexey Shvetsov <alexxy <AT> gentoo <DOT> org>
CommitDate: Sat Oct 29 15:03:56 2022 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=535b60e5
sci-chemistry/GromacsWrapper: add 0.8.2, drop 0.8.0-r1
Signed-off-by: Alexey Shvetsov <alexxy <AT> gentoo.org>
...GromacsWrapper-0.8.0-r1.ebuild => GromacsWrapper-0.8.2.ebuild} | 8 ++------
sci-chemistry/GromacsWrapper/Manifest | 2 +-
2 files changed, 3 insertions(+), 7 deletions(-)
diff --git a/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.0-r1.ebuild b/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.2.ebuild
similarity index 85%
rename from sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.0-r1.ebuild
rename to sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.2.ebuild
index e6354fb05f92..e1c1cccae2b8 100644
--- a/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.0-r1.ebuild
+++ b/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.2.ebuild
@@ -3,7 +3,8 @@
EAPI=7
-PYTHON_COMPAT=( python3_{7..10} )
+PYTHON_COMPAT=( python3_{8..10} )
+DISTUTILS_USE_PEP517=setuptools
if [[ ${PV} = *9999* ]]; then
scm_eclass=git-r3
@@ -37,8 +38,3 @@ BDEPEND="
"
distutils_enable_tests pytest
-
-PATCHES=(
- # https://github.com/Becksteinlab/GromacsWrapper/issues/182
- "${FILESDIR}"/${P}-tests-package.patch
-)
diff --git a/sci-chemistry/GromacsWrapper/Manifest b/sci-chemistry/GromacsWrapper/Manifest
index 693953f072e3..38f5f6269fbc 100644
--- a/sci-chemistry/GromacsWrapper/Manifest
+++ b/sci-chemistry/GromacsWrapper/Manifest
@@ -1 +1 @@
-DIST GromacsWrapper-0.8.0.tar.gz 1205837 BLAKE2B 3627e56df0dc6ba86caac67795416c7c8c187aaa4fac545600d17dcd799cb153feaab61a0f0632e051c4e9c0b4cd74f8e165156873e36bc53571bec78e5fca61 SHA512 da7215216c9a2b52094bb7e43e04f1b429c4893ba67b4bd850fe68e99f338813392fd9d0aa1b19d3398c694be964bc2badbf1b3623420da929ee4abcef18026f
+DIST GromacsWrapper-0.8.2.tar.gz 1954926 BLAKE2B c05995667f925a7519e07e59519e985693effa2fd511d228d236bff978d05430d422003e1360f9fda26564e40bb69183ae8e9b7334e0427c2b177f019df38a6a SHA512 b8a3e7da43eaabaf0fe12f4c06ff80f018847f9386c16eb66c96b3840c66b79d02ee47e675c08ed81df0ef495261c3b557d64c62caac0e484f661ef6b3a5be73
^ permalink raw reply related [flat|nested] 17+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/GromacsWrapper/
@ 2023-05-04 12:57 Pacho Ramos
0 siblings, 0 replies; 17+ messages in thread
From: Pacho Ramos @ 2023-05-04 12:57 UTC (permalink / raw
To: gentoo-commits
commit: 1800cfef1a9785b74a109c53af70e7215ad7f84b
Author: Pacho Ramos <pacho <AT> gentoo <DOT> org>
AuthorDate: Thu May 4 12:57:34 2023 +0000
Commit: Pacho Ramos <pacho <AT> gentoo <DOT> org>
CommitDate: Thu May 4 12:57:49 2023 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=1800cfef
sci-chemistry/GromacsWrapper: enable py3.11
Closes: https://bugs.gentoo.org/897192
Signed-off-by: Pacho Ramos <pacho <AT> gentoo.org>
sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.2.ebuild | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.2.ebuild b/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.2.ebuild
index 1ab456c78c9c..cf12f39f51df 100644
--- a/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.2.ebuild
+++ b/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.2.ebuild
@@ -3,7 +3,7 @@
EAPI=7
-PYTHON_COMPAT=( python3_{9..10} )
+PYTHON_COMPAT=( python3_{9..11} )
DISTUTILS_USE_PEP517=setuptools
if [[ ${PV} = *9999* ]]; then
^ permalink raw reply related [flat|nested] 17+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/GromacsWrapper/
@ 2023-06-19 14:00 Pacho Ramos
0 siblings, 0 replies; 17+ messages in thread
From: Pacho Ramos @ 2023-06-19 14:00 UTC (permalink / raw
To: gentoo-commits
commit: ea0092118654e1e058a6d2b7f35687885e176ec8
Author: Pacho Ramos <pacho <AT> gentoo <DOT> org>
AuthorDate: Mon Jun 19 13:48:34 2023 +0000
Commit: Pacho Ramos <pacho <AT> gentoo <DOT> org>
CommitDate: Mon Jun 19 14:00:19 2023 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=ea009211
sci-chemistry/GromacsWrapper: add 0.8.4
Signed-off-by: Pacho Ramos <pacho <AT> gentoo.org>
.../GromacsWrapper/GromacsWrapper-0.8.4.ebuild | 40 ++++++++++++++++++++++
sci-chemistry/GromacsWrapper/Manifest | 1 +
2 files changed, 41 insertions(+)
diff --git a/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.4.ebuild b/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.4.ebuild
new file mode 100644
index 000000000000..e5c508fd6ca1
--- /dev/null
+++ b/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.4.ebuild
@@ -0,0 +1,40 @@
+# Copyright 1999-2023 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=8
+
+PYTHON_COMPAT=( python3_{9..11} )
+DISTUTILS_USE_PEP517=setuptools
+
+if [[ ${PV} = *9999* ]]; then
+ scm_eclass=git-r3
+ EGIT_REPO_URI="https://github.com/Becksteinlab/${PN}.git"
+ EGIT_BRANCH="develop"
+ SRC_URI=""
+else
+ scm_eclass=vcs-snapshot
+ SRC_URI="https://github.com/Becksteinlab/${PN}/archive/release-${PV}.tar.gz -> ${P}.tar.gz"
+ KEYWORDS="~amd64 ~x86"
+fi
+
+inherit distutils-r1 ${scm_eclass}
+
+DESCRIPTION="Python framework for Gromacs"
+HOMEPAGE="https://gromacswrapper.readthedocs.io"
+
+LICENSE="GPL-3 LGPL-3"
+SLOT="0"
+IUSE=""
+
+RDEPEND="
+ dev-python/six[${PYTHON_USEDEP}]
+ dev-python/numpy[${PYTHON_USEDEP}]
+ dev-python/matplotlib[${PYTHON_USEDEP}]
+ sci-libs/numkit[${PYTHON_USEDEP}]
+"
+BDEPEND="
+ ${RDEPEND}
+ test? ( >=dev-python/pandas-0.17[${PYTHON_USEDEP}] )
+"
+
+distutils_enable_tests pytest
diff --git a/sci-chemistry/GromacsWrapper/Manifest b/sci-chemistry/GromacsWrapper/Manifest
index 38f5f6269fbc..413b6307fb54 100644
--- a/sci-chemistry/GromacsWrapper/Manifest
+++ b/sci-chemistry/GromacsWrapper/Manifest
@@ -1 +1,2 @@
DIST GromacsWrapper-0.8.2.tar.gz 1954926 BLAKE2B c05995667f925a7519e07e59519e985693effa2fd511d228d236bff978d05430d422003e1360f9fda26564e40bb69183ae8e9b7334e0427c2b177f019df38a6a SHA512 b8a3e7da43eaabaf0fe12f4c06ff80f018847f9386c16eb66c96b3840c66b79d02ee47e675c08ed81df0ef495261c3b557d64c62caac0e484f661ef6b3a5be73
+DIST GromacsWrapper-0.8.4.tar.gz 1955167 BLAKE2B 59f0301263eefaa4d7c139b34a48172c218a76f0f9488477d6203d9cd732098468dae5a73ff46aa74eb2b4433268c77bc265e506129e4c14a357042453d5f97f SHA512 822edc33c77ca4dbfbc1e4172686744345ed3c0d2305f4b19abab15576a1433bbb3b23b96f637398ad4f72cd5414d96ee531ab4a329d3acb462d90b95437a6a5
^ permalink raw reply related [flat|nested] 17+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/GromacsWrapper/
@ 2023-09-17 16:29 Pacho Ramos
0 siblings, 0 replies; 17+ messages in thread
From: Pacho Ramos @ 2023-09-17 16:29 UTC (permalink / raw
To: gentoo-commits
commit: 0e8702a1696810a53773169ab26bf212fc7b7de0
Author: Pacho Ramos <pacho <AT> gentoo <DOT> org>
AuthorDate: Sun Sep 17 16:10:00 2023 +0000
Commit: Pacho Ramos <pacho <AT> gentoo <DOT> org>
CommitDate: Sun Sep 17 16:29:25 2023 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=0e8702a1
sci-chemistry/GromacsWrapper: drop 0.8.2
Signed-off-by: Pacho Ramos <pacho <AT> gentoo.org>
.../GromacsWrapper/GromacsWrapper-0.8.2.ebuild | 40 ----------------------
sci-chemistry/GromacsWrapper/Manifest | 1 -
2 files changed, 41 deletions(-)
diff --git a/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.2.ebuild b/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.2.ebuild
deleted file mode 100644
index cf12f39f51df..000000000000
--- a/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.2.ebuild
+++ /dev/null
@@ -1,40 +0,0 @@
-# Copyright 1999-2023 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-PYTHON_COMPAT=( python3_{9..11} )
-DISTUTILS_USE_PEP517=setuptools
-
-if [[ ${PV} = *9999* ]]; then
- scm_eclass=git-r3
- EGIT_REPO_URI="https://github.com/Becksteinlab/${PN}.git"
- EGIT_BRANCH="develop"
- SRC_URI=""
-else
- scm_eclass=vcs-snapshot
- SRC_URI="https://github.com/Becksteinlab/${PN}/archive/release-${PV}.tar.gz -> ${P}.tar.gz"
- KEYWORDS="~amd64 ~x86"
-fi
-
-inherit distutils-r1 ${scm_eclass}
-
-DESCRIPTION="Python framework for Gromacs"
-HOMEPAGE="https://gromacswrapper.readthedocs.io"
-
-LICENSE="GPL-3 LGPL-3"
-SLOT="0"
-IUSE=""
-
-RDEPEND="
- dev-python/six[${PYTHON_USEDEP}]
- dev-python/numpy[${PYTHON_USEDEP}]
- dev-python/matplotlib[${PYTHON_USEDEP}]
- sci-libs/numkit[${PYTHON_USEDEP}]
-"
-BDEPEND="
- ${RDEPEND}
- test? ( >=dev-python/pandas-0.17[${PYTHON_USEDEP}] )
-"
-
-distutils_enable_tests pytest
diff --git a/sci-chemistry/GromacsWrapper/Manifest b/sci-chemistry/GromacsWrapper/Manifest
index d6ee7a0cfe65..73c27f10a076 100644
--- a/sci-chemistry/GromacsWrapper/Manifest
+++ b/sci-chemistry/GromacsWrapper/Manifest
@@ -1,3 +1,2 @@
-DIST GromacsWrapper-0.8.2.tar.gz 1954926 BLAKE2B c05995667f925a7519e07e59519e985693effa2fd511d228d236bff978d05430d422003e1360f9fda26564e40bb69183ae8e9b7334e0427c2b177f019df38a6a SHA512 b8a3e7da43eaabaf0fe12f4c06ff80f018847f9386c16eb66c96b3840c66b79d02ee47e675c08ed81df0ef495261c3b557d64c62caac0e484f661ef6b3a5be73
DIST GromacsWrapper-0.8.4.tar.gz 1955167 BLAKE2B 59f0301263eefaa4d7c139b34a48172c218a76f0f9488477d6203d9cd732098468dae5a73ff46aa74eb2b4433268c77bc265e506129e4c14a357042453d5f97f SHA512 822edc33c77ca4dbfbc1e4172686744345ed3c0d2305f4b19abab15576a1433bbb3b23b96f637398ad4f72cd5414d96ee531ab4a329d3acb462d90b95437a6a5
DIST GromacsWrapper-0.8.5.tar.gz 1958570 BLAKE2B b8f79721a7566117206818144fc7087c4634d7fb71c77abef63dd9565a0655ce6b4a259ea5bf9cb3b5bc13df8f428f58e514f7871192d27a6d463e758e27f4b3 SHA512 8800afdbe92edad35df58e825546797ede1738b9029df0fb57a96e377d7be94f3d21fe1df9d5cb4490d12b984972d63d87e673d3d33af60a7dc8d0453574a5c6
^ permalink raw reply related [flat|nested] 17+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/GromacsWrapper/
@ 2023-09-17 16:29 Pacho Ramos
0 siblings, 0 replies; 17+ messages in thread
From: Pacho Ramos @ 2023-09-17 16:29 UTC (permalink / raw
To: gentoo-commits
commit: dde2c49ecaeccc7ce8fd503f2aa14b2e9247ea5c
Author: Pacho Ramos <pacho <AT> gentoo <DOT> org>
AuthorDate: Sun Sep 17 16:09:55 2023 +0000
Commit: Pacho Ramos <pacho <AT> gentoo <DOT> org>
CommitDate: Sun Sep 17 16:29:25 2023 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=dde2c49e
sci-chemistry/GromacsWrapper: add 0.8.5
Signed-off-by: Pacho Ramos <pacho <AT> gentoo.org>
.../GromacsWrapper/GromacsWrapper-0.8.5.ebuild | 40 ++++++++++++++++++++++
sci-chemistry/GromacsWrapper/Manifest | 1 +
2 files changed, 41 insertions(+)
diff --git a/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.5.ebuild b/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.5.ebuild
new file mode 100644
index 000000000000..e5c508fd6ca1
--- /dev/null
+++ b/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.5.ebuild
@@ -0,0 +1,40 @@
+# Copyright 1999-2023 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=8
+
+PYTHON_COMPAT=( python3_{9..11} )
+DISTUTILS_USE_PEP517=setuptools
+
+if [[ ${PV} = *9999* ]]; then
+ scm_eclass=git-r3
+ EGIT_REPO_URI="https://github.com/Becksteinlab/${PN}.git"
+ EGIT_BRANCH="develop"
+ SRC_URI=""
+else
+ scm_eclass=vcs-snapshot
+ SRC_URI="https://github.com/Becksteinlab/${PN}/archive/release-${PV}.tar.gz -> ${P}.tar.gz"
+ KEYWORDS="~amd64 ~x86"
+fi
+
+inherit distutils-r1 ${scm_eclass}
+
+DESCRIPTION="Python framework for Gromacs"
+HOMEPAGE="https://gromacswrapper.readthedocs.io"
+
+LICENSE="GPL-3 LGPL-3"
+SLOT="0"
+IUSE=""
+
+RDEPEND="
+ dev-python/six[${PYTHON_USEDEP}]
+ dev-python/numpy[${PYTHON_USEDEP}]
+ dev-python/matplotlib[${PYTHON_USEDEP}]
+ sci-libs/numkit[${PYTHON_USEDEP}]
+"
+BDEPEND="
+ ${RDEPEND}
+ test? ( >=dev-python/pandas-0.17[${PYTHON_USEDEP}] )
+"
+
+distutils_enable_tests pytest
diff --git a/sci-chemistry/GromacsWrapper/Manifest b/sci-chemistry/GromacsWrapper/Manifest
index 413b6307fb54..d6ee7a0cfe65 100644
--- a/sci-chemistry/GromacsWrapper/Manifest
+++ b/sci-chemistry/GromacsWrapper/Manifest
@@ -1,2 +1,3 @@
DIST GromacsWrapper-0.8.2.tar.gz 1954926 BLAKE2B c05995667f925a7519e07e59519e985693effa2fd511d228d236bff978d05430d422003e1360f9fda26564e40bb69183ae8e9b7334e0427c2b177f019df38a6a SHA512 b8a3e7da43eaabaf0fe12f4c06ff80f018847f9386c16eb66c96b3840c66b79d02ee47e675c08ed81df0ef495261c3b557d64c62caac0e484f661ef6b3a5be73
DIST GromacsWrapper-0.8.4.tar.gz 1955167 BLAKE2B 59f0301263eefaa4d7c139b34a48172c218a76f0f9488477d6203d9cd732098468dae5a73ff46aa74eb2b4433268c77bc265e506129e4c14a357042453d5f97f SHA512 822edc33c77ca4dbfbc1e4172686744345ed3c0d2305f4b19abab15576a1433bbb3b23b96f637398ad4f72cd5414d96ee531ab4a329d3acb462d90b95437a6a5
+DIST GromacsWrapper-0.8.5.tar.gz 1958570 BLAKE2B b8f79721a7566117206818144fc7087c4634d7fb71c77abef63dd9565a0655ce6b4a259ea5bf9cb3b5bc13df8f428f58e514f7871192d27a6d463e758e27f4b3 SHA512 8800afdbe92edad35df58e825546797ede1738b9029df0fb57a96e377d7be94f3d21fe1df9d5cb4490d12b984972d63d87e673d3d33af60a7dc8d0453574a5c6
^ permalink raw reply related [flat|nested] 17+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/GromacsWrapper/
@ 2024-09-25 9:33 Andrew Ammerlaan
0 siblings, 0 replies; 17+ messages in thread
From: Andrew Ammerlaan @ 2024-09-25 9:33 UTC (permalink / raw
To: gentoo-commits
commit: 655a0855c061d8f2156f22f34aa9005d675538c3
Author: Filip Kobierski <fkobi <AT> pm <DOT> me>
AuthorDate: Mon Sep 23 16:28:39 2024 +0000
Commit: Andrew Ammerlaan <andrewammerlaan <AT> gentoo <DOT> org>
CommitDate: Wed Sep 25 09:32:06 2024 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=655a0855
sci-chemistry/GromacsWrapper: drop 0.8.4
Signed-off-by: Filip Kobierski <fkobi <AT> pm.me>
Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> gentoo.org>
.../GromacsWrapper/GromacsWrapper-0.8.4.ebuild | 40 ----------------------
sci-chemistry/GromacsWrapper/Manifest | 1 -
2 files changed, 41 deletions(-)
diff --git a/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.4.ebuild b/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.4.ebuild
deleted file mode 100644
index e5c508fd6ca1..000000000000
--- a/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.4.ebuild
+++ /dev/null
@@ -1,40 +0,0 @@
-# Copyright 1999-2023 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=8
-
-PYTHON_COMPAT=( python3_{9..11} )
-DISTUTILS_USE_PEP517=setuptools
-
-if [[ ${PV} = *9999* ]]; then
- scm_eclass=git-r3
- EGIT_REPO_URI="https://github.com/Becksteinlab/${PN}.git"
- EGIT_BRANCH="develop"
- SRC_URI=""
-else
- scm_eclass=vcs-snapshot
- SRC_URI="https://github.com/Becksteinlab/${PN}/archive/release-${PV}.tar.gz -> ${P}.tar.gz"
- KEYWORDS="~amd64 ~x86"
-fi
-
-inherit distutils-r1 ${scm_eclass}
-
-DESCRIPTION="Python framework for Gromacs"
-HOMEPAGE="https://gromacswrapper.readthedocs.io"
-
-LICENSE="GPL-3 LGPL-3"
-SLOT="0"
-IUSE=""
-
-RDEPEND="
- dev-python/six[${PYTHON_USEDEP}]
- dev-python/numpy[${PYTHON_USEDEP}]
- dev-python/matplotlib[${PYTHON_USEDEP}]
- sci-libs/numkit[${PYTHON_USEDEP}]
-"
-BDEPEND="
- ${RDEPEND}
- test? ( >=dev-python/pandas-0.17[${PYTHON_USEDEP}] )
-"
-
-distutils_enable_tests pytest
diff --git a/sci-chemistry/GromacsWrapper/Manifest b/sci-chemistry/GromacsWrapper/Manifest
index 73c27f10a076..fe13a2d825db 100644
--- a/sci-chemistry/GromacsWrapper/Manifest
+++ b/sci-chemistry/GromacsWrapper/Manifest
@@ -1,2 +1 @@
-DIST GromacsWrapper-0.8.4.tar.gz 1955167 BLAKE2B 59f0301263eefaa4d7c139b34a48172c218a76f0f9488477d6203d9cd732098468dae5a73ff46aa74eb2b4433268c77bc265e506129e4c14a357042453d5f97f SHA512 822edc33c77ca4dbfbc1e4172686744345ed3c0d2305f4b19abab15576a1433bbb3b23b96f637398ad4f72cd5414d96ee531ab4a329d3acb462d90b95437a6a5
DIST GromacsWrapper-0.8.5.tar.gz 1958570 BLAKE2B b8f79721a7566117206818144fc7087c4634d7fb71c77abef63dd9565a0655ce6b4a259ea5bf9cb3b5bc13df8f428f58e514f7871192d27a6d463e758e27f4b3 SHA512 8800afdbe92edad35df58e825546797ede1738b9029df0fb57a96e377d7be94f3d21fe1df9d5cb4490d12b984972d63d87e673d3d33af60a7dc8d0453574a5c6
^ permalink raw reply related [flat|nested] 17+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/GromacsWrapper/
@ 2024-09-25 9:33 Andrew Ammerlaan
0 siblings, 0 replies; 17+ messages in thread
From: Andrew Ammerlaan @ 2024-09-25 9:33 UTC (permalink / raw
To: gentoo-commits
commit: 9520a81d102517512e60f38ed5805a8ebc0e3ea0
Author: Filip Kobierski <fkobi <AT> pm <DOT> me>
AuthorDate: Tue Sep 24 17:49:35 2024 +0000
Commit: Andrew Ammerlaan <andrewammerlaan <AT> gentoo <DOT> org>
CommitDate: Wed Sep 25 09:32:07 2024 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=9520a81d
sci-chemistry/GromacsWrapper: remove empty variables
Signed-off-by: Filip Kobierski <fkobi <AT> pm.me>
Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> gentoo.org>
sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.5.ebuild | 4 +---
1 file changed, 1 insertion(+), 3 deletions(-)
diff --git a/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.5.ebuild b/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.5.ebuild
index e5c508fd6ca1..92f160defd29 100644
--- a/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.5.ebuild
+++ b/sci-chemistry/GromacsWrapper/GromacsWrapper-0.8.5.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2023 Gentoo Authors
+# Copyright 1999-2024 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=8
@@ -10,7 +10,6 @@ if [[ ${PV} = *9999* ]]; then
scm_eclass=git-r3
EGIT_REPO_URI="https://github.com/Becksteinlab/${PN}.git"
EGIT_BRANCH="develop"
- SRC_URI=""
else
scm_eclass=vcs-snapshot
SRC_URI="https://github.com/Becksteinlab/${PN}/archive/release-${PV}.tar.gz -> ${P}.tar.gz"
@@ -24,7 +23,6 @@ HOMEPAGE="https://gromacswrapper.readthedocs.io"
LICENSE="GPL-3 LGPL-3"
SLOT="0"
-IUSE=""
RDEPEND="
dev-python/six[${PYTHON_USEDEP}]
^ permalink raw reply related [flat|nested] 17+ messages in thread
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2020-01-16 6:39 [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/GromacsWrapper/ Michał Górny
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2024-09-25 9:33 Andrew Ammerlaan
2024-09-25 9:33 Andrew Ammerlaan
2023-09-17 16:29 Pacho Ramos
2023-09-17 16:29 Pacho Ramos
2023-06-19 14:00 Pacho Ramos
2023-05-04 12:57 Pacho Ramos
2022-10-29 15:04 Alexey Shvetsov
2022-01-13 16:13 Alexey Shvetsov
2022-01-13 16:13 Alexey Shvetsov
2021-04-17 20:08 Pacho Ramos
2021-04-12 1:09 Sam James
2021-04-03 15:44 Sam James
2019-08-23 13:18 Alexey Shvetsov
2018-09-03 21:20 Alexey Shvetsov
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