[gentoo-commits] proj/sci:master commit in: sci-biology/biobambam2/

["Martin Mokrejs" <mmokrejs@fold.natur.cuni.cz>]

commit:     5b51e6e70104d94d1a287add2206c31eca040da2
Author:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Mon Dec 30 15:33:25 2019 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Mon Dec 30 15:33:25 2019 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=5b51e6e7

sci-biology/biobambam2: version bump to 2.0.146

Package-Manager: Portage-2.3.75, Repoman-2.3.17
Signed-off-by: Martin Mokrejs <mmokrejs <AT> fold.natur.cuni.cz>

 sci-biology/biobambam2/biobambam2-2.0.146.ebuild | 29 ++++++++++++++++++++++++
 1 file changed, 29 insertions(+)

diff --git a/sci-biology/biobambam2/biobambam2-2.0.146.ebuild b/sci-biology/biobambam2/biobambam2-2.0.146.ebuild
new file mode 100644
index 000000000..1921fe3b7
--- /dev/null
+++ b/sci-biology/biobambam2/biobambam2-2.0.146.ebuild
@@ -0,0 +1,29 @@
+# Copyright 1999-2019 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+
+inherit autotools
+
+release_data="20191030105216"
+
+DESCRIPTION="Tools for bam file processing (libmaus2)"
+HOMEPAGE="https://gitlab.com/german.tischler/biobambam2
+	https://github.com/gt1/biobambam2"
+SRC_URI="https://gitlab.com/german.tischler/${PN}/-/archive/${PV}-release-${release_data}/${P}-release-${release_data}.tar.gz -> ${P}.tar.gz"
+
+LICENSE="GPL-3 MIT"
+SLOT="0"
+KEYWORDS=""
+IUSE=""
+
+DEPEND="
+	!sci-biology/biobambam
+	>=sci-libs/libmaus2-2.0.683"
+RDEPEND="${DEPEND}"
+
+S="${WORKDIR}/${P}-release-${release_data}"
+
+src_configure(){
+	econf --with-libmaus2="${EPREFIX}"
+}