* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/gmxapi/
@ 2019-03-07 16:00 Alexey Shvetsov
0 siblings, 0 replies; 5+ messages in thread
From: Alexey Shvetsov @ 2019-03-07 16:00 UTC (permalink / raw
To: gentoo-commits
commit: ef5ecf680ba73c80128032ab031589188d49bc50
Author: Alexey Shvetsov <alexxy <AT> gentoo <DOT> org>
AuthorDate: Thu Mar 7 16:00:08 2019 +0000
Commit: Alexey Shvetsov <alexxy <AT> gentoo <DOT> org>
CommitDate: Thu Mar 7 16:00:26 2019 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=ef5ecf68
sci-chemistry/gmxapi: New package
Package-Manager: Portage-2.3.62, Repoman-2.3.12
Signed-off-by: Alexey Shvetsov <alexxy <AT> gentoo.org>
sci-chemistry/gmxapi/Manifest | 1 +
sci-chemistry/gmxapi/gmxapi-0.0.7.1.ebuild | 60 ++++++++++++++++++++++++++++++
sci-chemistry/gmxapi/metadata.xml | 12 ++++++
3 files changed, 73 insertions(+)
diff --git a/sci-chemistry/gmxapi/Manifest b/sci-chemistry/gmxapi/Manifest
new file mode 100644
index 00000000000..7057d007aed
--- /dev/null
+++ b/sci-chemistry/gmxapi/Manifest
@@ -0,0 +1 @@
+DIST gmxapi-0.0.7.1.tar.gz 671400 BLAKE2B 5db024bceaed262fc1bd2ef35c0c24a31eff12abde7766ba0eea9d5aabe04c435cdf3c79c04d7932f2110de837a0d06e1f66239f22ba6f313410ed8c9d899788 SHA512 4103d67be3c869907613ec74fc46f14b15242ad93a973fc984dbb25e79bb0bb697d9d2ad9b67a8da2500e5a89b8f78ea1ef1632455af29830e11c2bf1f11bc44
diff --git a/sci-chemistry/gmxapi/gmxapi-0.0.7.1.ebuild b/sci-chemistry/gmxapi/gmxapi-0.0.7.1.ebuild
new file mode 100644
index 00000000000..babdf402976
--- /dev/null
+++ b/sci-chemistry/gmxapi/gmxapi-0.0.7.1.ebuild
@@ -0,0 +1,60 @@
+# Copyright 2019 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+
+MAKE_MAKEFILE_GENERATOR="ninja"
+
+PYTHON_COMPAT=( python2_7 python3_{4,5,6} )
+
+inherit cmake-utils python-r1
+
+DESCRIPTION="Gromacs API bindings"
+HOMEPAGE="https://github.com/kassonlab/gmxapi"
+SRC_URI="https://github.com/kassonlab/gmxapi/archive/v${PV}.tar.gz -> ${P}.tar.gz"
+
+LICENSE="LGPL-2.1"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+IUSE=""
+
+REQUIRED_USE="${PYTHON_REQUIRED_USE}"
+
+DEPEND="
+ ${PYTHON_DEPS}
+ >=sci-chemistry/gromacs-2019:="
+RDEPEND="
+ ${DEPEND}
+ sci-libs/scikits[${PYTHON_USEDEP}]
+ dev-python/networkx[${PYTHON_USEDEP}]
+"
+BDEPEND=""
+
+src_configure() {
+ my_impl_src_configure() {
+ local mycmakeargs=(
+ -DCMAKE_STRIP="${EPREFIX}/bin/true"
+ -DCMAKE_INSTALL_PREFIX="${ED%/}/usr"
+ -DPYTHON_EXECUTABLE="${EPREFIX}/usr/bin/${EPYTHON}"
+ -DGMXAPI_INSTALL_PATH="${EPREFIX}/usr/$(get_libdir)/${EPYTHON}/site-packages/gmx"
+ )
+
+ cmake-utils_src_configure
+ }
+
+ python_foreach_impl my_impl_src_configure
+}
+
+src_compile() {
+ python_foreach_impl cmake-utils_src_make
+}
+
+src_install() {
+ my_impl_src_install() {
+ cd "${BUILD_DIR}" || die
+ cmake-utils_src_install
+ python_optimize
+ }
+
+ python_foreach_impl my_impl_src_install
+}
diff --git a/sci-chemistry/gmxapi/metadata.xml b/sci-chemistry/gmxapi/metadata.xml
new file mode 100644
index 00000000000..7daa2ce7e5f
--- /dev/null
+++ b/sci-chemistry/gmxapi/metadata.xml
@@ -0,0 +1,12 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+ <maintainer type="person">
+ <email>alexxy@gentoo.org</email>
+ <name>Alexey Shvetsov</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-chemistry@gentoo.org</email>
+ <name>Gentoo Chemistry Project</name>
+ </maintainer>
+</pkgmetadata>
^ permalink raw reply related [flat|nested] 5+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/gmxapi/
@ 2019-08-03 20:39 Alexey Shvetsov
0 siblings, 0 replies; 5+ messages in thread
From: Alexey Shvetsov @ 2019-08-03 20:39 UTC (permalink / raw
To: gentoo-commits
commit: c6d227cef1a88492700ba80a6f1c77e2e08d02c8
Author: Alexey Shvetsov <alexxy <AT> gentoo <DOT> org>
AuthorDate: Sat Aug 3 20:38:00 2019 +0000
Commit: Alexey Shvetsov <alexxy <AT> gentoo <DOT> org>
CommitDate: Sat Aug 3 20:38:34 2019 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=c6d227ce
sci-chemistry/gmxapi: Works with py3.7
Package-Manager: Portage-2.3.69, Repoman-2.3.16
Signed-off-by: Alexey Shvetsov <alexxy <AT> gentoo.org>
sci-chemistry/gmxapi/gmxapi-0.0.7.1.ebuild | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/sci-chemistry/gmxapi/gmxapi-0.0.7.1.ebuild b/sci-chemistry/gmxapi/gmxapi-0.0.7.1.ebuild
index ab2e052e7dd..f27d423c9d2 100644
--- a/sci-chemistry/gmxapi/gmxapi-0.0.7.1.ebuild
+++ b/sci-chemistry/gmxapi/gmxapi-0.0.7.1.ebuild
@@ -5,7 +5,7 @@ EAPI=7
MAKE_MAKEFILE_GENERATOR="ninja"
-PYTHON_COMPAT=( python2_7 python3_{5,6} )
+PYTHON_COMPAT=( python2_7 python3_{5,6,7} )
inherit cmake-utils python-r1
^ permalink raw reply related [flat|nested] 5+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/gmxapi/
@ 2019-12-29 13:23 Andreas Sturmlechner
0 siblings, 0 replies; 5+ messages in thread
From: Andreas Sturmlechner @ 2019-12-29 13:23 UTC (permalink / raw
To: gentoo-commits
commit: e46f3fc6135310208cd58b9d33dd4b9371d13715
Author: Andreas Sturmlechner <asturm <AT> gentoo <DOT> org>
AuthorDate: Sat Dec 28 16:44:35 2019 +0000
Commit: Andreas Sturmlechner <asturm <AT> gentoo <DOT> org>
CommitDate: Sun Dec 29 13:22:55 2019 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=e46f3fc6
sci-chemistry/gmxapi: Drop python2_7
Package-Manager: Portage-2.3.84, Repoman-2.3.20
Signed-off-by: Andreas Sturmlechner <asturm <AT> gentoo.org>
sci-chemistry/gmxapi/gmxapi-0.0.7.1.ebuild | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/sci-chemistry/gmxapi/gmxapi-0.0.7.1.ebuild b/sci-chemistry/gmxapi/gmxapi-0.0.7.1.ebuild
index f27d423c9d2..6df827220ef 100644
--- a/sci-chemistry/gmxapi/gmxapi-0.0.7.1.ebuild
+++ b/sci-chemistry/gmxapi/gmxapi-0.0.7.1.ebuild
@@ -5,7 +5,7 @@ EAPI=7
MAKE_MAKEFILE_GENERATOR="ninja"
-PYTHON_COMPAT=( python2_7 python3_{5,6,7} )
+PYTHON_COMPAT=( python3_{5,6,7} )
inherit cmake-utils python-r1
^ permalink raw reply related [flat|nested] 5+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/gmxapi/
@ 2020-02-08 16:25 David Seifert
0 siblings, 0 replies; 5+ messages in thread
From: David Seifert @ 2020-02-08 16:25 UTC (permalink / raw
To: gentoo-commits
commit: 9cb2526db2fad7ef14750522c3930cac8ef7e8bd
Author: David Seifert <soap <AT> gentoo <DOT> org>
AuthorDate: Sat Feb 8 16:23:23 2020 +0000
Commit: David Seifert <soap <AT> gentoo <DOT> org>
CommitDate: Sat Feb 8 16:23:23 2020 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=9cb2526d
sci-chemistry/gmxapi: [QA] Fix UnnecessarySlashStrip
Signed-off-by: David Seifert <soap <AT> gentoo.org>
sci-chemistry/gmxapi/gmxapi-0.0.7.1.ebuild | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/sci-chemistry/gmxapi/gmxapi-0.0.7.1.ebuild b/sci-chemistry/gmxapi/gmxapi-0.0.7.1.ebuild
index 5bb47665f02..d7ad455c4f2 100644
--- a/sci-chemistry/gmxapi/gmxapi-0.0.7.1.ebuild
+++ b/sci-chemistry/gmxapi/gmxapi-0.0.7.1.ebuild
@@ -34,7 +34,7 @@ src_configure() {
my_impl_src_configure() {
local mycmakeargs=(
-DCMAKE_STRIP="${EPREFIX}/bin/true"
- -DCMAKE_INSTALL_PREFIX="${ED%/}/usr"
+ -DCMAKE_INSTALL_PREFIX="${ED}/usr"
-DPYTHON_EXECUTABLE="${EPREFIX}/usr/bin/${EPYTHON}"
-DGMXAPI_INSTALL_PATH="${EPREFIX}/usr/$(get_libdir)/${EPYTHON}/site-packages/gmx"
)
^ permalink raw reply related [flat|nested] 5+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/gmxapi/
@ 2021-01-24 18:51 David Seifert
0 siblings, 0 replies; 5+ messages in thread
From: David Seifert @ 2021-01-24 18:51 UTC (permalink / raw
To: gentoo-commits
commit: 3f49f302209a2500efff0b8bf04903ba3f6ccf45
Author: Aisha Tammy <gentoo <AT> aisha <DOT> cc>
AuthorDate: Sun Jan 24 18:51:25 2021 +0000
Commit: David Seifert <soap <AT> gentoo <DOT> org>
CommitDate: Sun Jan 24 18:51:25 2021 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=3f49f302
sci-chemistry/gmxapi: drop RDEPEND on sci-libs/scikits
Closes: https://bugs.gentoo.org/749306
Package-Manager: Portage-3.0.13, Repoman-3.0.2
Signed-off-by: Aisha Tammy <gentoo <AT> aisha.cc>
Signed-off-by: David Seifert <soap <AT> gentoo.org>
.../gmxapi/{gmxapi-0.0.7.1.ebuild => gmxapi-0.0.7.1-r1.ebuild} | 3 +--
1 file changed, 1 insertion(+), 2 deletions(-)
diff --git a/sci-chemistry/gmxapi/gmxapi-0.0.7.1.ebuild b/sci-chemistry/gmxapi/gmxapi-0.0.7.1-r1.ebuild
similarity index 94%
rename from sci-chemistry/gmxapi/gmxapi-0.0.7.1.ebuild
rename to sci-chemistry/gmxapi/gmxapi-0.0.7.1-r1.ebuild
index d7ad455c4f2..0527b71da6e 100644
--- a/sci-chemistry/gmxapi/gmxapi-0.0.7.1.ebuild
+++ b/sci-chemistry/gmxapi/gmxapi-0.0.7.1-r1.ebuild
@@ -1,4 +1,4 @@
-# Copyright 2019-2020 Gentoo Authors
+# Copyright 2019-2021 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=7
@@ -25,7 +25,6 @@ DEPEND="
>=sci-chemistry/gromacs-2019:="
RDEPEND="
${DEPEND}
- sci-libs/scikits[${PYTHON_USEDEP}]
dev-python/networkx[${PYTHON_USEDEP}]
"
BDEPEND=""
^ permalink raw reply related [flat|nested] 5+ messages in thread
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