* [gentoo-commits] repo/gentoo:master commit in: sci-libs/rosetta-fragments/
@ 2018-01-06 13:35 Justin Lecher
0 siblings, 0 replies; 5+ messages in thread
From: Justin Lecher @ 2018-01-06 13:35 UTC (permalink / raw
To: gentoo-commits
commit: 9c91c5aeeeab659d33ed526773c1d1a7fe2ddcf3
Author: Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Sat Jan 6 13:07:27 2018 +0000
Commit: Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Sat Jan 6 13:35:37 2018 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=9c91c5ae
sci-libs/rosetta-fragments: Bump to EAPI=6
Add latest hashes
Closes: https://bugs.gentoo.org/642910
Signed-off-by: Justin Lecher <jlec <AT> gentoo.org>
Package-Manager: Portage-2.3.19, Repoman-2.3.6
.../rosetta-fragments/rosetta-fragments-3.1-r1.ebuild | 18 ++++++++++++------
1 file changed, 12 insertions(+), 6 deletions(-)
diff --git a/sci-libs/rosetta-fragments/rosetta-fragments-3.1-r1.ebuild b/sci-libs/rosetta-fragments/rosetta-fragments-3.1-r1.ebuild
index 055c225edf1..63666973b31 100644
--- a/sci-libs/rosetta-fragments/rosetta-fragments-3.1-r1.ebuild
+++ b/sci-libs/rosetta-fragments/rosetta-fragments-3.1-r1.ebuild
@@ -1,7 +1,7 @@
-# Copyright 1999-2014 Gentoo Foundation
+# Copyright 1999-2018 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-EAPI=5
+EAPI=6
inherit eutils flag-o-matic prefix toolchain-funcs
@@ -24,15 +24,18 @@ RESTRICT="fetch"
S="${WORKDIR}"/${PN/-/_}
+PATCHES=(
+ "${FILESDIR}"/${P}-nnmake.patch
+ "${FILESDIR}"/${P}-chemshift.patch
+)
+
pkg_nofetch() {
einfo "Go to ${HOMEPAGE} and get ${PN}.tgz and rename it to ${A}"
einfo "which must be placed in ${DISTDIR}"
}
src_prepare() {
- epatch \
- "${FILESDIR}"/${P}-nnmake.patch \
- "${FILESDIR}"/${P}-chemshift.patch
+ default
tc-export F77
eprefixify nnmake/*.pl
}
@@ -52,5 +55,8 @@ src_install() {
insinto /usr/share/${PN}
doins -r *_database
- dodoc fragments.README nnmake/{nnmake.README,vall/*.pl} chemshift/chemshift.README
+ dodoc \
+ fragments.README \
+ nnmake/{nnmake.README,vall/*.pl} \
+ chemshift/chemshift.README
}
^ permalink raw reply related [flat|nested] 5+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-libs/rosetta-fragments/
@ 2018-01-06 13:35 Justin Lecher
0 siblings, 0 replies; 5+ messages in thread
From: Justin Lecher @ 2018-01-06 13:35 UTC (permalink / raw
To: gentoo-commits
commit: a87d2970779713a061659d3cac1d0cd9f21dbc1c
Author: Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Sat Jan 6 13:09:11 2018 +0000
Commit: Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Sat Jan 6 13:35:37 2018 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=a87d2970
sci-libs/rosetta-fragments: Drop unknown dependency
Signed-off-by: Justin Lecher <jlec <AT> gentoo.org>
Package-Manager: Portage-2.3.19, Repoman-2.3.6
sci-libs/rosetta-fragments/rosetta-fragments-3.1-r1.ebuild | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/sci-libs/rosetta-fragments/rosetta-fragments-3.1-r1.ebuild b/sci-libs/rosetta-fragments/rosetta-fragments-3.1-r1.ebuild
index 63666973b31..7f57da918ba 100644
--- a/sci-libs/rosetta-fragments/rosetta-fragments-3.1-r1.ebuild
+++ b/sci-libs/rosetta-fragments/rosetta-fragments-3.1-r1.ebuild
@@ -17,7 +17,7 @@ IUSE=""
DEPEND=""
RDEPEND="
sci-biology/ncbi-tools
- || ( sci-biology/update-blastdb sci-biology/ncbi-tools++ )
+ sci-biology/update-blastdb
sci-biology/psipred"
RESTRICT="fetch"
^ permalink raw reply related [flat|nested] 5+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-libs/rosetta-fragments/
@ 2018-01-06 18:25 Justin Lecher
0 siblings, 0 replies; 5+ messages in thread
From: Justin Lecher @ 2018-01-06 18:25 UTC (permalink / raw
To: gentoo-commits
commit: 2082454e7c34bd5bf50807428943572abc6f7e9c
Author: Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Sat Jan 6 17:48:50 2018 +0000
Commit: Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Sat Jan 6 18:25:38 2018 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=2082454e
sci-libs/rosetta-fragments: Fix hashes
Closes: https://bugs.gentoo.org/642910
Signed-off-by: Justin Lecher <jlec <AT> gentoo.org>
Package-Manager: Portage-2.3.19, Repoman-2.3.6
sci-libs/rosetta-fragments/Manifest | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/sci-libs/rosetta-fragments/Manifest b/sci-libs/rosetta-fragments/Manifest
index efbeb3f0997..838f4129d74 100644
--- a/sci-libs/rosetta-fragments/Manifest
+++ b/sci-libs/rosetta-fragments/Manifest
@@ -1 +1 @@
-DIST rosetta3.1_fragments.tgz 221931894 SHA256 2211cab76e4848d80d6fd311e97535de220a865d8afc72d8ca12f90b7d4641bf SHA512 a2b2646c916ea1b98e2c7267c1eadb1fd6cb76d015c24bd4e8318ce127cb5d96ca56bfdd76821e1dd884e03d59631f544e221b9f541ad4063a99e96dbb029da1 WHIRLPOOL 32d0758e6782da8088178e11af5bfe23b457e98a3ab9a8cbb583d4e4aa48e5d1ef9005825ff62944c5c755a0ac99b3ff88fb7c1d1b249940110287969ff0118a
+DIST rosetta3.1_fragments.tgz 221931894 BLAKE2B 0fb5764f24f3386cdbce9afce7da3f81cce91a6a0a57a265e5dbe0bf06146e4ab057c02961ed0dd8074f86309257bcf5b42ca0d1c6adf92c9f8ebf36b3f25f5d SHA512 a2b2646c916ea1b98e2c7267c1eadb1fd6cb76d015c24bd4e8318ce127cb5d96ca56bfdd76821e1dd884e03d59631f544e221b9f541ad4063a99e96dbb029da1
^ permalink raw reply related [flat|nested] 5+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-libs/rosetta-fragments/
@ 2019-02-05 18:46 Ben Kohler
0 siblings, 0 replies; 5+ messages in thread
From: Ben Kohler @ 2019-02-05 18:46 UTC (permalink / raw
To: gentoo-commits
commit: 6ecf0b9d21837f60108bc5463045506f16ca4ae0
Author: Ben Kohler <bkohler <AT> gentoo <DOT> org>
AuthorDate: Tue Feb 5 18:42:12 2019 +0000
Commit: Ben Kohler <bkohler <AT> gentoo <DOT> org>
CommitDate: Tue Feb 5 18:45:12 2019 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=6ecf0b9d
sci-libs/rosetta-fragments: don't reference ${DISTDIR} in pkg_nofetch
Package-Manager: Portage-2.3.59, Repoman-2.3.12
Signed-off-by: Ben Kohler <bkohler <AT> gentoo.org>
sci-libs/rosetta-fragments/rosetta-fragments-3.1-r1.ebuild | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/sci-libs/rosetta-fragments/rosetta-fragments-3.1-r1.ebuild b/sci-libs/rosetta-fragments/rosetta-fragments-3.1-r1.ebuild
index 7f57da918ba..3dff9b7585b 100644
--- a/sci-libs/rosetta-fragments/rosetta-fragments-3.1-r1.ebuild
+++ b/sci-libs/rosetta-fragments/rosetta-fragments-3.1-r1.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2018 Gentoo Foundation
+# Copyright 1999-2019 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=6
@@ -31,7 +31,7 @@ PATCHES=(
pkg_nofetch() {
einfo "Go to ${HOMEPAGE} and get ${PN}.tgz and rename it to ${A}"
- einfo "which must be placed in ${DISTDIR}"
+ einfo "which must be placed into your DISTDIR directory."
}
src_prepare() {
^ permalink raw reply related [flat|nested] 5+ messages in thread
* [gentoo-commits] repo/gentoo:master commit in: sci-libs/rosetta-fragments/
@ 2020-02-12 18:06 David Seifert
0 siblings, 0 replies; 5+ messages in thread
From: David Seifert @ 2020-02-12 18:06 UTC (permalink / raw
To: gentoo-commits
commit: 0cf1a85b67d63a03fb36329879beb35cd700fa38
Author: David Seifert <soap <AT> gentoo <DOT> org>
AuthorDate: Wed Feb 12 18:03:14 2020 +0000
Commit: David Seifert <soap <AT> gentoo <DOT> org>
CommitDate: Wed Feb 12 18:03:14 2020 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=0cf1a85b
sci-libs/rosetta-fragments: [QA] inherit vcs-clean.eclass directly
Package-Manager: Portage-2.3.88, Repoman-2.3.20
Signed-off-by: David Seifert <soap <AT> gentoo.org>
sci-libs/rosetta-fragments/rosetta-fragments-3.1-r1.ebuild | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/sci-libs/rosetta-fragments/rosetta-fragments-3.1-r1.ebuild b/sci-libs/rosetta-fragments/rosetta-fragments-3.1-r1.ebuild
index 3dff9b7585b..2e5c7afd21c 100644
--- a/sci-libs/rosetta-fragments/rosetta-fragments-3.1-r1.ebuild
+++ b/sci-libs/rosetta-fragments/rosetta-fragments-3.1-r1.ebuild
@@ -1,9 +1,9 @@
-# Copyright 1999-2019 Gentoo Authors
+# Copyright 1999-2020 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=6
-inherit eutils flag-o-matic prefix toolchain-funcs
+inherit eutils flag-o-matic prefix toolchain-funcs vcs-clean
DESCRIPTION="Fragment library for rosetta"
HOMEPAGE="http://www.rosettacommons.org"
^ permalink raw reply related [flat|nested] 5+ messages in thread
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