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* [gentoo-commits] proj/sci:master commit in: sci-biology/poretools/
@ 2017-05-12 22:18 Martin Mokrejs
  0 siblings, 0 replies; 3+ messages in thread
From: Martin Mokrejs @ 2017-05-12 22:18 UTC (permalink / raw
  To: gentoo-commits

commit:     1e2eca70fc0fffc3a16875a71f27fddeb2252fba
Author:     Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Fri May 12 22:18:05 2017 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Fri May 12 22:18:05 2017 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=1e2eca70

sci-biology/poretools: new package

Package-Manager: Portage-2.3.5, Repoman-2.3.2

 sci-biology/poretools/metadata.xml           | 12 ++++++++++++
 sci-biology/poretools/poretools-0.6.0.ebuild | 26 ++++++++++++++++++++++++++
 2 files changed, 38 insertions(+)

diff --git a/sci-biology/poretools/metadata.xml b/sci-biology/poretools/metadata.xml
new file mode 100644
index 000000000..f68a1b6fa
--- /dev/null
+++ b/sci-biology/poretools/metadata.xml
@@ -0,0 +1,12 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+  <maintainer type="person">
+    <email>mmokrejs@fold.natur.cuni.cz</email>
+    <name>Martin Mokrejs</name>
+  </maintainer>
+  <maintainer type="project">
+    <email>sci-biology@gentoo.org</email>
+    <name>Gentoo Biology Project</name>
+  </maintainer>
+</pkgmetadata>

diff --git a/sci-biology/poretools/poretools-0.6.0.ebuild b/sci-biology/poretools/poretools-0.6.0.ebuild
new file mode 100644
index 000000000..449d486db
--- /dev/null
+++ b/sci-biology/poretools/poretools-0.6.0.ebuild
@@ -0,0 +1,26 @@
+# Copyright 1999-2017 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=6
+
+PYTHON_COMPAT=( python2_7 )
+
+inherit distutils-r1
+
+DESCRIPTION="Tools for sequencing FAST5 data from Oxford Nanopore"
+HOMEPAGE="https://poretools.readthedocs.io
+	https://github.com/arq5x/poretools"
+SRC_URI="https://github.com/arq5x/poretools/archive/v0.6.0.tar.gz -> ${P}.tar.gz"
+
+LICENSE="GPL-2" # https://github.com/arq5x/poretools/issues/136
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+IUSE=""
+
+DEPEND=""
+RDEPEND="${DEPEND}
+	>=sci-libs/hdf5-1.8.7
+	>=dev-python/h5py-2.2[${PYTHON_USEDEP}]
+	dev-python/matplotlib[${PYTHON_USEDEP}]
+	dev-python/seaborn[${PYTHON_USEDEP}]
+	dev-python/pandas[${PYTHON_USEDEP}]"


^ permalink raw reply related	[flat|nested] 3+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-biology/poretools/
@ 2018-06-28 13:54 Martin Mokrejs
  0 siblings, 0 replies; 3+ messages in thread
From: Martin Mokrejs @ 2018-06-28 13:54 UTC (permalink / raw
  To: gentoo-commits

commit:     c5518a330eed03dff467108d89666cc1996d7da5
Author:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Thu Jun 28 13:54:24 2018 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Thu Jun 28 13:54:24 2018 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=c5518a33

sci-biology/poretools: change LICENSE, add missing DEPENDency

Package-Manager: Portage-2.3.40, Repoman-2.3.9

 sci-biology/poretools/poretools-0.6.0.ebuild | 7 ++++---
 1 file changed, 4 insertions(+), 3 deletions(-)

diff --git a/sci-biology/poretools/poretools-0.6.0.ebuild b/sci-biology/poretools/poretools-0.6.0.ebuild
index 449d486db..158c10a9d 100644
--- a/sci-biology/poretools/poretools-0.6.0.ebuild
+++ b/sci-biology/poretools/poretools-0.6.0.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2017 Gentoo Foundation
+# Copyright 1999-2018 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
 
 EAPI=6
@@ -12,7 +12,7 @@ HOMEPAGE="https://poretools.readthedocs.io
 	https://github.com/arq5x/poretools"
 SRC_URI="https://github.com/arq5x/poretools/archive/v0.6.0.tar.gz -> ${P}.tar.gz"
 
-LICENSE="GPL-2" # https://github.com/arq5x/poretools/issues/136
+LICENSE="MIT"
 SLOT="0"
 KEYWORDS="~amd64 ~x86"
 IUSE=""
@@ -23,4 +23,5 @@ RDEPEND="${DEPEND}
 	>=dev-python/h5py-2.2[${PYTHON_USEDEP}]
 	dev-python/matplotlib[${PYTHON_USEDEP}]
 	dev-python/seaborn[${PYTHON_USEDEP}]
-	dev-python/pandas[${PYTHON_USEDEP}]"
+	dev-python/pandas[${PYTHON_USEDEP}]
+	dev-python/python-dateutil[${PYTHON_USEDEP}]"


^ permalink raw reply related	[flat|nested] 3+ messages in thread

* [gentoo-commits] proj/sci:master commit in: sci-biology/poretools/
@ 2020-09-27  8:09 Horea Christian
  0 siblings, 0 replies; 3+ messages in thread
From: Horea Christian @ 2020-09-27  8:09 UTC (permalink / raw
  To: gentoo-commits

commit:     8bd6809f827842baeb663fae27e9627c9788c92b
Author:     Horea Christian <chr <AT> chymera <DOT> eu>
AuthorDate: Sun Sep 27 08:06:44 2020 +0000
Commit:     Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Sun Sep 27 08:06:44 2020 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=8bd6809f

sci-biology/poretools: removed discontinued package

Package-Manager: Portage-3.0.8, Repoman-3.0.1
Signed-off-by: Horea Christian <chr <AT> chymera.eu>

 sci-biology/poretools/metadata.xml           | 12 ------------
 sci-biology/poretools/poretools-0.6.0.ebuild | 27 ---------------------------
 2 files changed, 39 deletions(-)

diff --git a/sci-biology/poretools/metadata.xml b/sci-biology/poretools/metadata.xml
deleted file mode 100644
index 138cb7705..000000000
--- a/sci-biology/poretools/metadata.xml
+++ /dev/null
@@ -1,12 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-	<maintainer type="person">
-		<email>mmokrejs@fold.natur.cuni.cz</email>
-		<name>Martin Mokrejs</name>
-	</maintainer>
-	<maintainer type="project">
-		<email>sci-biology@gentoo.org</email>
-		<name>Gentoo Biology Project</name>
-	</maintainer>
-</pkgmetadata>

diff --git a/sci-biology/poretools/poretools-0.6.0.ebuild b/sci-biology/poretools/poretools-0.6.0.ebuild
deleted file mode 100644
index 158c10a9d..000000000
--- a/sci-biology/poretools/poretools-0.6.0.ebuild
+++ /dev/null
@@ -1,27 +0,0 @@
-# Copyright 1999-2018 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=6
-
-PYTHON_COMPAT=( python2_7 )
-
-inherit distutils-r1
-
-DESCRIPTION="Tools for sequencing FAST5 data from Oxford Nanopore"
-HOMEPAGE="https://poretools.readthedocs.io
-	https://github.com/arq5x/poretools"
-SRC_URI="https://github.com/arq5x/poretools/archive/v0.6.0.tar.gz -> ${P}.tar.gz"
-
-LICENSE="MIT"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE=""
-
-DEPEND=""
-RDEPEND="${DEPEND}
-	>=sci-libs/hdf5-1.8.7
-	>=dev-python/h5py-2.2[${PYTHON_USEDEP}]
-	dev-python/matplotlib[${PYTHON_USEDEP}]
-	dev-python/seaborn[${PYTHON_USEDEP}]
-	dev-python/pandas[${PYTHON_USEDEP}]
-	dev-python/python-dateutil[${PYTHON_USEDEP}]"


^ permalink raw reply related	[flat|nested] 3+ messages in thread

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