From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by finch.gentoo.org (Postfix) with ESMTPS id C059D1382C5 for ; Wed, 23 May 2018 00:25:07 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id E92B6E09C0; Wed, 23 May 2018 00:25:06 +0000 (UTC) Received: from smtp.gentoo.org (woodpecker.gentoo.org [IPv6:2001:470:ea4a:1:5054:ff:fec7:86e4]) (using TLSv1.2 with cipher ECDHE-RSA-AES128-GCM-SHA256 (128/128 bits)) (No client certificate requested) by pigeon.gentoo.org (Postfix) with ESMTPS id A8C0CE09C0 for ; Wed, 23 May 2018 00:25:06 +0000 (UTC) Received: from oystercatcher.gentoo.org (unknown [IPv6:2a01:4f8:202:4333:225:90ff:fed9:fc84]) (using TLSv1.2 with cipher ECDHE-RSA-AES128-GCM-SHA256 (128/128 bits)) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id 0D31D335C51 for ; Wed, 23 May 2018 00:25:04 +0000 (UTC) Received: from localhost.localdomain (localhost [IPv6:::1]) by oystercatcher.gentoo.org (Postfix) with ESMTP id 78B562AC for ; Wed, 23 May 2018 00:25:02 +0000 (UTC) From: "Horea Christian" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "Horea Christian" Message-ID: <1527035076.8c25ca238bd0d2df7e204f6506d7258a6cdf1615.chymera@gentoo> Subject: [gentoo-commits] proj/sci:master commit in: sci-libs/pybids/ X-VCS-Repository: proj/sci X-VCS-Files: sci-libs/pybids/metadata.xml sci-libs/pybids/pybids-0.5.0.ebuild sci-libs/pybids/pybids-9999.ebuild X-VCS-Directories: sci-libs/pybids/ X-VCS-Committer: chymera X-VCS-Committer-Name: Horea Christian X-VCS-Revision: 8c25ca238bd0d2df7e204f6506d7258a6cdf1615 X-VCS-Branch: master Date: Wed, 23 May 2018 00:25:02 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Archives-Salt: ec62e529-3cd5-4fcf-a9bf-8359a464f586 X-Archives-Hash: 48311ed3d1dc1225cbd3d34ee3147b38 commit: 8c25ca238bd0d2df7e204f6506d7258a6cdf1615 Author: Horea Christian yandex com> AuthorDate: Wed May 23 00:24:36 2018 +0000 Commit: Horea Christian gmail com> CommitDate: Wed May 23 00:24:36 2018 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=8c25ca23 sci-libs/pybids: new package Package-Manager: Portage-2.3.38, Repoman-2.3.9 sci-libs/pybids/metadata.xml | 20 ++++++++++++++++++++ sci-libs/pybids/pybids-0.5.0.ebuild | 34 ++++++++++++++++++++++++++++++++++ sci-libs/pybids/pybids-9999.ebuild | 37 +++++++++++++++++++++++++++++++++++++ 3 files changed, 91 insertions(+) diff --git a/sci-libs/pybids/metadata.xml b/sci-libs/pybids/metadata.xml new file mode 100644 index 000000000..143b3ea21 --- /dev/null +++ b/sci-libs/pybids/metadata.xml @@ -0,0 +1,20 @@ + + + + + horea.christ@gmail.com + Horea Christian + + + sci@gentoo.org + Gentoo Science Project + + + PyBIDS is a Python library to centralize interactions with datasets + conforming BIDS (Brain Imaging Data Structure) format. For more + information about BIDS visit http://bids.neuroimaging.io. + + + INCF/pybids + + diff --git a/sci-libs/pybids/pybids-0.5.0.ebuild b/sci-libs/pybids/pybids-0.5.0.ebuild new file mode 100644 index 000000000..2a2ecf29e --- /dev/null +++ b/sci-libs/pybids/pybids-0.5.0.ebuild @@ -0,0 +1,34 @@ +# Copyright 1999-2018 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 + +EAPI=6 + +PYTHON_COMPAT=( python{2_7,3_4,3_5} ) + +inherit distutils-r1 + +DESCRIPTION="Python package to access BIDS datasets" +HOMEPAGE="https://github.com/INCF/pybids" +SRC_URI="https://github.com/INCF/pybids/archive/${PV}.tar.gz -> ${P}.tar.gz" + +LICENSE="MIT" +SLOT="0" +KEYWORDS="~amd64" +IUSE="" + +DEPEND=" + dev-python/setuptools[${PYTHON_USEDEP}] + " +RDEPEND=" + dev-python/grabbit[${PYTHON_USEDEP}] + dev-python/num2words[${PYTHON_USEDEP}] + dev-python/numpy[${PYTHON_USEDEP}] + dev-python/pandas[${PYTHON_USEDEP}] + dev-python/patsy[${PYTHON_USEDEP}] + dev-python/six[${PYTHON_USEDEP}] + sci-libs/nibabel[${PYTHON_USEDEP}] + sci-libs/scipy[${PYTHON_USEDEP}] + " + +# Tests are broken: https://github.com/INCF/pybids/issues/138 +RESTRICT="test" diff --git a/sci-libs/pybids/pybids-9999.ebuild b/sci-libs/pybids/pybids-9999.ebuild new file mode 100644 index 000000000..397820db4 --- /dev/null +++ b/sci-libs/pybids/pybids-9999.ebuild @@ -0,0 +1,37 @@ +# Copyright 1999-2018 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 + +EAPI=6 + +PYTHON_COMPAT=( python{2_7,3_4,3_5} ) + +inherit distutils-r1 git-r3 + +DESCRIPTION="Python package to access BIDS datasets" +HOMEPAGE="https://github.com/INCF/pybids" +SRC_URI="" +EGIT_REPO_URI="https://github.com/INCF/pybids" + +LICENSE="MIT" +SLOT="0" +KEYWORDS="" +IUSE="test" + +DEPEND=" + dev-python/setuptools[${PYTHON_USEDEP}] + test? ( dev-python/pytest[${PYTHON_USEDEP}] ) + " +RDEPEND=" + dev-python/grabbit[${PYTHON_USEDEP}] + dev-python/num2words[${PYTHON_USEDEP}] + dev-python/numpy[${PYTHON_USEDEP}] + dev-python/pandas[${PYTHON_USEDEP}] + dev-python/patsy[${PYTHON_USEDEP}] + dev-python/six[${PYTHON_USEDEP}] + sci-libs/nibabel[${PYTHON_USEDEP}] + sci-libs/scipy[${PYTHON_USEDEP}] + " + +python_test() { + py.test -v || die +}