From: "Martin Mokrejs" <mmokrejs@fold.natur.cuni.cz>
To: gentoo-commits@lists.gentoo.org
Subject: [gentoo-commits] proj/sci:master commit in: sci-biology/quorum/
Date: Tue, 1 May 2018 22:38:05 +0000 (UTC) [thread overview]
Message-ID: <1525214277.8ca2d5383f188ff26ee9714b431dfed95c8b9b7a.mmokrejs@gentoo> (raw)
commit: 8ca2d5383f188ff26ee9714b431dfed95c8b9b7a
Author: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Tue May 1 22:37:57 2018 +0000
Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Tue May 1 22:37:57 2018 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=8ca2d538
sci-biology/quorum: drop old
Anyway it doe snot compile with gcc-7.3.0, see
https://github.com/gmarcais/Jellyfish/issues/122
Package-Manager: Portage-2.3.31, Repoman-2.3.9
sci-biology/quorum/quorum-0.2.1-r1.ebuild | 28 ----------------------------
1 file changed, 28 deletions(-)
diff --git a/sci-biology/quorum/quorum-0.2.1-r1.ebuild b/sci-biology/quorum/quorum-0.2.1-r1.ebuild
deleted file mode 100644
index d7bb7675a..000000000
--- a/sci-biology/quorum/quorum-0.2.1-r1.ebuild
+++ /dev/null
@@ -1,28 +0,0 @@
-# Copyright 1999-2018 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=6
-
-inherit eutils autotools
-
-DESCRIPTION="Correct substitution errors in Illumina reads"
-HOMEPAGE="http://www.genome.umd.edu/quorum.html"
-SRC_URI="ftp://ftp.genome.umd.edu/pub/QuorUM/${P}.tar.gz"
-
-LICENSE="GPL-3"
-SLOT="0"
-KEYWORDS="~amd64"
-IUSE=""
-
-DEPEND="sci-biology/jellyfish:1"
-RDEPEND="${DEPEND}"
-
-src_prepare(){
- default
- epatch "${FILESDIR}"/"${P}"-use-jellyfish1.patch
- eautoreconf
-}
-
-src_configure(){
- econf --enable-relative-paths --with-relative-jf-path
-}
next reply other threads:[~2018-05-01 22:38 UTC|newest]
Thread overview: 7+ messages / expand[flat|nested] mbox.gz Atom feed top
2018-05-01 22:38 Martin Mokrejs [this message]
-- strict thread matches above, loose matches on Subject: below --
2021-03-06 13:35 [gentoo-commits] proj/sci:master commit in: sci-biology/quorum/ Andrew Ammerlaan
2017-05-15 16:13 Martin Mokrejs
2017-05-15 13:39 Martin Mokrejs
2017-01-10 1:03 Martin Mokrejs
2015-04-30 21:15 Martin Mokrejs
2015-04-30 20:52 Martin Mokrejs
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