From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from lists.gentoo.org (pigeon.gentoo.org [208.92.234.80]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by finch.gentoo.org (Postfix) with ESMTPS id 7CA041382C5 for ; Wed, 18 Apr 2018 18:16:06 +0000 (UTC) Received: from pigeon.gentoo.org (localhost [127.0.0.1]) by pigeon.gentoo.org (Postfix) with SMTP id BE38BE092D; Wed, 18 Apr 2018 18:16:04 +0000 (UTC) Received: from smtp.gentoo.org (smtp.gentoo.org [IPv6:2001:470:ea4a:1:5054:ff:fec7:86e4]) (using TLSv1.2 with cipher ECDHE-RSA-AES128-GCM-SHA256 (128/128 bits)) (No client certificate requested) by pigeon.gentoo.org (Postfix) with ESMTPS id 99225E092B for ; Wed, 18 Apr 2018 18:16:04 +0000 (UTC) Received: from oystercatcher.gentoo.org (unknown [IPv6:2a01:4f8:202:4333:225:90ff:fed9:fc84]) (using TLSv1.2 with cipher ECDHE-RSA-AES128-GCM-SHA256 (128/128 bits)) (No client certificate requested) by smtp.gentoo.org (Postfix) with ESMTPS id 66628335C8E for ; Wed, 18 Apr 2018 18:16:03 +0000 (UTC) Received: from localhost.localdomain (localhost [IPv6:::1]) by oystercatcher.gentoo.org (Postfix) with ESMTP id 27EF8298 for ; Wed, 18 Apr 2018 18:15:59 +0000 (UTC) From: "David Seifert" To: gentoo-commits@lists.gentoo.org Content-Transfer-Encoding: 8bit Content-type: text/plain; charset=UTF-8 Reply-To: gentoo-dev@lists.gentoo.org, "David Seifert" Message-ID: <1524075334.9f556bbd5e982b9d590218542007d5441de32232.soap@gentoo> Subject: [gentoo-commits] repo/gentoo:master commit in: sci-biology/bioruby/files/ X-VCS-Repository: repo/gentoo X-VCS-Files: sci-biology/bioruby/files/bioruby-1.4.3.0001-fix-tests.patch X-VCS-Directories: sci-biology/bioruby/files/ X-VCS-Committer: soap X-VCS-Committer-Name: David Seifert X-VCS-Revision: 9f556bbd5e982b9d590218542007d5441de32232 X-VCS-Branch: master Date: Wed, 18 Apr 2018 18:15:59 +0000 (UTC) Precedence: bulk List-Post: List-Help: List-Unsubscribe: List-Subscribe: List-Id: Gentoo Linux mail X-BeenThere: gentoo-commits@lists.gentoo.org X-Archives-Salt: deeac334-2ac8-4fb5-b67b-0a738cb11a86 X-Archives-Hash: 79abbb74a91bc23b4218f346732b9829 commit: 9f556bbd5e982b9d590218542007d5441de32232 Author: Michael Mair-Keimberger gmail com> AuthorDate: Tue Apr 17 07:52:46 2018 +0000 Commit: David Seifert gentoo org> CommitDate: Wed Apr 18 18:15:34 2018 +0000 URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=9f556bbd sci-biology/bioruby: remove unused patch Closes: https://github.com/gentoo/gentoo/pull/8034 .../files/bioruby-1.4.3.0001-fix-tests.patch | 29 ---------------------- 1 file changed, 29 deletions(-) diff --git a/sci-biology/bioruby/files/bioruby-1.4.3.0001-fix-tests.patch b/sci-biology/bioruby/files/bioruby-1.4.3.0001-fix-tests.patch deleted file mode 100644 index 71c4ca27104..00000000000 --- a/sci-biology/bioruby/files/bioruby-1.4.3.0001-fix-tests.patch +++ /dev/null @@ -1,29 +0,0 @@ -From edda65b8fb32c2eee6b0652074981c31aa68b0eb Mon Sep 17 00:00:00 2001 -From: Naohisa Goto -Date: Fri, 23 Aug 2013 23:51:59 +0900 -Subject: [PATCH] Test bug fix: Read test file with binary mode to avoid - encoding error - - * Test bug fix: Read test file with binary mode to avoid string encoding - error. Thanks to nieder (github.com/nieder) who reports the bug. - (https://github.com/bioruby/bioruby/issues/84) ---- - test/unit/bio/db/test_phyloxml.rb | 2 +- - 1 file changed, 1 insertion(+), 1 deletion(-) - -diff --git a/test/unit/bio/db/test_phyloxml.rb b/test/unit/bio/db/test_phyloxml.rb -index 0744c64..c24278d 100644 ---- a/test/unit/bio/db/test_phyloxml.rb -+++ b/test/unit/bio/db/test_phyloxml.rb -@@ -100,7 +100,7 @@ def test_open_with_block - end - - def test_new -- str = File.read(TestPhyloXMLData.example_xml) -+ str = File.open(TestPhyloXMLData.example_xml, "rb") { |f| f.read } - assert_instance_of(Bio::PhyloXML::Parser, - phyloxml = Bio::PhyloXML::Parser.new(str)) - common_test_next_tree(phyloxml) --- -1.8.4 -